RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 TRMT44Q8IYL2 757 aaKnown RBP7.95□□□□□ -1.14
SRP54-212ENST00000556992 MAP4K5Q9Y4K4 846 aa7.95□□□□□ -1.14
SRP54-212ENST00000556992 TTLL8A6PVC2 850 aa7.94□□□□□ -1.14
SRP54-212ENST00000556992 TUSC1Q2TAM9 212 aa7.94□□□□□ -1.14
SRP54-212ENST00000556992 AGBL1Q96MI9 1066 aa7.94□□□□□ -1.14
SRP54-212ENST00000556992 CNTNAP3BQ96NU0 1288 aa7.94□□□□□ -1.14
SRP54-212ENST00000556992 CNTNAP3Q9BZ76 1288 aa7.94□□□□□ -1.14
SRP54-212ENST00000556992 EMILIN1Q9Y6C2 1016 aa7.94□□□□□ -1.14
SRP54-212ENST00000556992 PTSQ03393 145 aa7.93□□□□□ -1.14
SRP54-212ENST00000556992 TSEN34Q9BSV6 310 aaKnown RBP7.93□□□□□ -1.14
SRP54-212ENST00000556992 NR6A1Q15406 480 aa7.91□□□□□ -1.14
SRP54-212ENST00000556992 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.91□□□□□ -1.14
SRP54-212ENST00000556992 ARHGAP9Q9BRR9 750 aa7.91□□□□□ -1.14
SRP54-212ENST00000556992 GSK3AP49840 483 aa7.9□□□□□ -1.14
SRP54-212ENST00000556992 RAB15P59190 212 aa7.9□□□□□ -1.14
SRP54-212ENST00000556992 RELBQ01201 579 aa7.9□□□□□ -1.14
SRP54-212ENST00000556992 KCTD17Q8N5Z5 321 aa7.9□□□□□ -1.14
SRP54-212ENST00000556992 PROCA1Q8NCQ7 364 aaPredicted RBP7.9□□□□□ -1.14
SRP54-212ENST00000556992 KCTD15Q96SI1 283 aaPredicted RBP7.9□□□□□ -1.14
SRP54-212ENST00000556992 OCSTAMPQ9BR26 566 aa7.9□□□□□ -1.14
SRP54-212ENST00000556992 CTSOP43234 321 aaPredicted RBP7.89□□□□□ -1.15
SRP54-212ENST00000556992 RNFT1Q5M7Z0 435 aa7.89□□□□□ -1.15
SRP54-212ENST00000556992 Q6ZVU0 165 aa7.89□□□□□ -1.15
SRP54-212ENST00000556992 CCDC155Q8N6L0 562 aa7.89□□□□□ -1.15
SRP54-212ENST00000556992 SLC10A4Q96EP9 437 aa7.89□□□□□ -1.15
SRP54-212ENST00000556992 COL25A1Q9BXS0 654 aaPredicted RBP7.89□□□□□ -1.15
SRP54-212ENST00000556992 FKBPLQ9UIM3 349 aa7.89□□□□□ -1.15
SRP54-212ENST00000556992 DCAF1Q9Y4B6 1507 aa7.88□□□□□ -1.15
SRP54-212ENST00000556992 SPINT1O43278 529 aa7.88□□□□□ -1.15
SRP54-212ENST00000556992 INTS6LQ5JSJ4 861 aaKnown RBP7.88□□□□□ -1.15
SRP54-212ENST00000556992 EPS8L1Q8TE68 723 aa7.88□□□□□ -1.15
SRP54-212ENST00000556992 INSM2Q96T92 566 aaPredicted RBP7.88□□□□□ -1.15
SRP54-212ENST00000556992 ZNF395Q9H8N7 513 aaPredicted RBP7.88□□□□□ -1.15
SRP54-212ENST00000556992 TMPRSS4Q9NRS4 437 aa7.88□□□□□ -1.15
SRP54-212ENST00000556992 PGPEP1Q9NXJ5 209 aa7.88□□□□□ -1.15
SRP54-212ENST00000556992 ATP1B4Q9UN42 357 aaPredicted RBP7.88□□□□□ -1.15
SRP54-212ENST00000556992 PDXDC2PQ6P474 469 aa7.87□□□□□ -1.15
SRP54-212ENST00000556992 ZBTB33Q86T24 672 aa7.87□□□□□ -1.15
SRP54-212ENST00000556992 GPKOWQ92917 476 aaPredicted RBP eCLIP7.87□□□□□ -1.15
SRP54-212ENST00000556992 RSPH6AQ9H0K4 717 aa7.87□□□□□ -1.15
SRP54-212ENST00000556992 GPBP1L1Q9HC44 474 aaPredicted RBP7.87□□□□□ -1.15
SRP54-212ENST00000556992 SHROOM4Q9ULL8 1493 aa7.87□□□□□ -1.15
SRP54-212ENST00000556992 CDC14CA4D256 554 aa7.86□□□□□ -1.15
SRP54-212ENST00000556992 WHAMMQ8TF30 809 aa7.86□□□□□ -1.15
SRP54-212ENST00000556992 LOC100996750A0A140TA64 210 aa7.85□□□□□ -1.15
SRP54-212ENST00000556992 VWA5B2Q8N398 1253 aa7.85□□□□□ -1.15
SRP54-212ENST00000556992 ADAM32Q8TC27 787 aa7.85□□□□□ -1.15
SRP54-212ENST00000556992 KRTAP4-6Q9BYQ5 205 aa7.85□□□□□ -1.15
SRP54-212ENST00000556992 POLMQ9NP87 494 aaPredicted RBP7.85□□□□□ -1.15
SRP54-212ENST00000556992 SLC35F4A4IF30 521 aa7.84□□□□□ -1.15
SRP54-212ENST00000556992 AP1G2O75843 785 aa7.84□□□□□ -1.15
SRP54-212ENST00000556992 KCNMA1Q12791 1236 aa7.84□□□□□ -1.15
SRP54-212ENST00000556992 ZNF385CQ66K41 422 aaPredicted RBP7.84□□□□□ -1.15
SRP54-212ENST00000556992 HMX1Q9NP08 348 aaPredicted RBP7.84□□□□□ -1.15
SRP54-212ENST00000556992 ADAMTS8Q9UP79 889 aa7.84□□□□□ -1.15
SRP54-212ENST00000556992 ITGA6P23229 1130 aa7.83□□□□□ -1.16
SRP54-212ENST00000556992 ZNF784Q8NCA9 323 aaPredicted RBP7.83□□□□□ -1.16
SRP54-212ENST00000556992 FAM117AQ9C073 453 aa7.83□□□□□ -1.16
SRP54-212ENST00000556992 SVOPQ8N4V2 548 aa7.82□□□□□ -1.16
SRP54-212ENST00000556992 RNF217Q8TC41 542 aa7.82□□□□□ -1.16
SRP54-212ENST00000556992 SENP3-EIF4A1A0A087X0R7 540 aa7.81□□□□□ -1.16
SRP54-212ENST00000556992 ADD1P35611 737 aaKnown RBP7.81□□□□□ -1.16
SRP54-212ENST00000556992 RASSF7Q02833 373 aa7.81□□□□□ -1.16
SRP54-212ENST00000556992 DHX9Q08211 1270 aaKnown RBP7.81□□□□□ -1.16
SRP54-212ENST00000556992 SUZ12Q15022 739 aaKnown RBP7.81□□□□□ -1.16
SRP54-212ENST00000556992 SKIV2LQ15477 1246 aaKnown RBP7.81□□□□□ -1.16
SRP54-212ENST00000556992 NANOS1Q8WY41 292 aaKnown RBP7.81□□□□□ -1.16
SRP54-212ENST00000556992 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.81□□□□□ -1.16
SRP54-212ENST00000556992 GDF11O95390 407 aa7.8□□□□□ -1.16
SRP54-212ENST00000556992 PTK2Q05397 1052 aa7.8□□□□□ -1.16
SRP54-212ENST00000556992 SH3D19Q5HYK7 790 aa7.8□□□□□ -1.16
SRP54-212ENST00000556992 FOXD4L5Q5VV16 416 aaPredicted RBP7.8□□□□□ -1.16
SRP54-212ENST00000556992 KDM4CQ9H3R0 1056 aa7.8□□□□□ -1.16
SRP54-212ENST00000556992 ERVH48-1M5A8F1 160 aa7.79□□□□□ -1.16
SRP54-212ENST00000556992 TMEM151AQ8N4L1 468 aa7.79□□□□□ -1.16
SRP54-212ENST00000556992 KDF1Q8NAX2 398 aaPredicted RBP7.79□□□□□ -1.16
SRP54-212ENST00000556992 CUEDC1Q9NWM3 386 aaPredicted RBP7.79□□□□□ -1.16
SRP54-212ENST00000556992 CDV3Q9UKY7 258 aaKnown RBP7.79□□□□□ -1.16
SRP54-212ENST00000556992 MYO15BQ96JP2 1530 aa7.78□□□□□ -1.16
SRP54-212ENST00000556992 LILRA1O75019 489 aa7.78□□□□□ -1.16
SRP54-212ENST00000556992 SV2AQ7L0J3 742 aa7.78□□□□□ -1.16
SRP54-212ENST00000556992 ADH1AP07327 375 aa7.77□□□□□ -1.17
SRP54-212ENST00000556992 USP17L8P0C7I0 530 aa7.77□□□□□ -1.17
SRP54-212ENST00000556992 RHOQP17081 205 aa7.77□□□□□ -1.17
SRP54-212ENST00000556992 PPP2R2DQ66LE6 453 aa7.77□□□□□ -1.17
SRP54-212ENST00000556992 DZIP3Q86Y13 1208 aaKnown RBP7.77□□□□□ -1.17
SRP54-212ENST00000556992 CYLDQ9NQC7 956 aa7.77□□□□□ -1.17
SRP54-212ENST00000556992 ZC3H4Q9UPT8 1303 aaKnown RBP7.77□□□□□ -1.17
SRP54-212ENST00000556992 IRS1P35568 1242 aa7.76□□□□□ -1.17
SRP54-212ENST00000556992 ARHGEF15O94989 841 aa7.75□□□□□ -1.17
SRP54-212ENST00000556992 PTGIRP43119 386 aa7.75□□□□□ -1.17
SRP54-212ENST00000556992 NBPF20Q3BBV1 942 aa7.75□□□□□ -1.17
SRP54-212ENST00000556992 LYPD4Q6UWN0 246 aa7.75□□□□□ -1.17
SRP54-212ENST00000556992 PRICKLE2Q7Z3G6 844 aa7.75□□□□□ -1.17
SRP54-212ENST00000556992 GPR25O00155 361 aa7.74□□□□□ -1.17
SRP54-212ENST00000556992 ADAMTS2O95450 1211 aa7.74□□□□□ -1.17
SRP54-212ENST00000556992 SLURP2P0DP57 97 aa7.74□□□□□ -1.17
SRP54-212ENST00000556992 GAS6Q14393 721 aa7.73□□□□□ -1.17
SRP54-212ENST00000556992 GPAT2Q6NUI2 795 aa7.73□□□□□ -1.17
SRP54-212ENST00000556992 GPSM3Q9Y4H4 160 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms