RNA–Protein interactions for RNA: ENST00000556956.1

SLIRP-208, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 450 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-208ENST00000556956 FCHSD2O94868 740 aa5.39□□□□□ -1.55
SLIRP-208ENST00000556956 CCNYL3P0C7X3 344 aa5.39□□□□□ -1.55
SLIRP-208ENST00000556956 KRTAP5-3Q6L8H2 238 aa5.39□□□□□ -1.55
SLIRP-208ENST00000556956 FAM174AQ8TBP5 190 aa5.39□□□□□ -1.55
SLIRP-208ENST00000556956 SUV39H2Q9H5I1 410 aa5.39□□□□□ -1.55
SLIRP-208ENST00000556956 YBX3P16989 372 aaKnown RBP eCLIP5.38□□□□□ -1.55
SLIRP-208ENST00000556956 GUCA2AQ02747 115 aa5.38□□□□□ -1.55
SLIRP-208ENST00000556956 SMYD5Q6GMV2 418 aa5.38□□□□□ -1.55
SLIRP-208ENST00000556956 GPR25O00155 361 aa5.37□□□□□ -1.55
SLIRP-208ENST00000556956 KCNV2Q8TDN2 545 aa5.37□□□□□ -1.55
SLIRP-208ENST00000556956 PHOX2BQ99453 314 aa5.37□□□□□ -1.55
SLIRP-208ENST00000556956 MKL2Q9ULH7 1088 aa5.37□□□□□ -1.55
SLIRP-208ENST00000556956 SPINT1O43278 529 aa5.36□□□□□ -1.55
SLIRP-208ENST00000556956 OIP5O43482 229 aa5.36□□□□□ -1.55
SLIRP-208ENST00000556956 RSPO4Q2I0M5 234 aaPredicted RBP5.36□□□□□ -1.55
SLIRP-208ENST00000556956 SHISA8B8ZZ34 492 aa5.35□□□□□ -1.55
SLIRP-208ENST00000556956 KDM4AO75164 1064 aa5.35□□□□□ -1.55
SLIRP-208ENST00000556956 FZD5Q13467 585 aa5.35□□□□□ -1.55
SLIRP-208ENST00000556956 FOXJ1Q92949 421 aa5.35□□□□□ -1.55
SLIRP-208ENST00000556956 EVA1BQ9NVM1 165 aa5.35□□□□□ -1.55
SLIRP-208ENST00000556956 TULP1O00294 542 aaPredicted RBP5.34□□□□□ -1.55
SLIRP-208ENST00000556956 MS4A1P11836 297 aa5.34□□□□□ -1.55
SLIRP-208ENST00000556956 CTSOP43234 321 aaPredicted RBP5.34□□□□□ -1.55
SLIRP-208ENST00000556956 LRRC4BQ9NT99 713 aa5.34□□□□□ -1.55
SLIRP-208ENST00000556956 KCNH2Q12809 1159 aa5.33□□□□□ -1.56
SLIRP-208ENST00000556956 CBLBQ13191 982 aa5.33□□□□□ -1.56
SLIRP-208ENST00000556956 MCTP1Q6DN14 999 aa5.33□□□□□ -1.56
SLIRP-208ENST00000556956 CD46P15529 392 aa5.32□□□□□ -1.56
SLIRP-208ENST00000556956 RETREG3Q86VR2 466 aa5.32□□□□□ -1.56
SLIRP-208ENST00000556956 HOXA2O43364 376 aa5.31□□□□□ -1.56
SLIRP-208ENST00000556956 C4orf48Q5BLP8 95 aa5.31□□□□□ -1.56
SLIRP-208ENST00000556956 NKAPLQ5M9Q1 402 aa5.31□□□□□ -1.56
SLIRP-208ENST00000556956 LINC00114Q6XXX2 140 aa5.31□□□□□ -1.56
SLIRP-208ENST00000556956 ZNF837Q96EG3 531 aaPredicted RBP5.31□□□□□ -1.56
SLIRP-208ENST00000556956 HOXB4P17483 251 aaPredicted RBP5.3□□□□□ -1.56
SLIRP-208ENST00000556956 FSHRP23945 695 aa5.3□□□□□ -1.56
SLIRP-208ENST00000556956 PTPRNQ16849 979 aa5.3□□□□□ -1.56
SLIRP-208ENST00000556956 C1orf229Q6ZS94 237 aaPredicted RBP5.3□□□□□ -1.56
SLIRP-208ENST00000556956 RRAGCQ9HB90 399 aa5.3□□□□□ -1.56
SLIRP-208ENST00000556956 KDM2AQ9Y2K7 1162 aa5.3□□□□□ -1.56
SLIRP-208ENST00000556956 SEMA3EO15041 775 aa5.29□□□□□ -1.56
SLIRP-208ENST00000556956 HYAL3O43820 417 aaPredicted RBP5.29□□□□□ -1.56
SLIRP-208ENST00000556956 TXKP42681 527 aa5.29□□□□□ -1.56
SLIRP-208ENST00000556956 HIC1Q14526 733 aa5.29□□□□□ -1.56
SLIRP-208ENST00000556956 RNF217Q8TC41 542 aa5.29□□□□□ -1.56
SLIRP-208ENST00000556956 INSM2Q96T92 566 aaPredicted RBP5.29□□□□□ -1.56
SLIRP-208ENST00000556956 LRP8Q14114 963 aa5.28□□□□□ -1.56
SLIRP-208ENST00000556956 Q6ZVU0 165 aa5.28□□□□□ -1.56
SLIRP-208ENST00000556956 TESPA1A2RU30 521 aaPredicted RBP5.27□□□□□ -1.57
SLIRP-208ENST00000556956 DYRK3O43781 588 aa5.27□□□□□ -1.57
SLIRP-208ENST00000556956 USP46P62068 366 aa5.27□□□□□ -1.57
SLIRP-208ENST00000556956 FMNL2Q96PY5 1086 aa5.27□□□□□ -1.57
SLIRP-208ENST00000556956 EMILIN1Q9Y6C2 1016 aa5.27□□□□□ -1.57
SLIRP-208ENST00000556956 PAX4O43316 350 aa5.26□□□□□ -1.57
SLIRP-208ENST00000556956 GATA4P43694 442 aa5.26□□□□□ -1.57
SLIRP-208ENST00000556956 PRSS36Q5K4E3 855 aa5.26□□□□□ -1.57
SLIRP-208ENST00000556956 AGBL1Q96MI9 1066 aa5.26□□□□□ -1.57
SLIRP-208ENST00000556956 OXCT2Q9BYC2 517 aaPredicted RBP5.26□□□□□ -1.57
SLIRP-208ENST00000556956 DBN1Q16643 649 aa5.25□□□□□ -1.57
SLIRP-208ENST00000556956 KRTAP9-8Q9BYQ0 159 aa5.25□□□□□ -1.57
SLIRP-208ENST00000556956 POLMQ9NP87 494 aaPredicted RBP5.25□□□□□ -1.57
SLIRP-208ENST00000556956 MX2P20592 715 aa5.24□□□□□ -1.57
SLIRP-208ENST00000556956 LCE4AQ5TA78 99 aa5.24□□□□□ -1.57
SLIRP-208ENST00000556956 TRIM22Q8IYM9 498 aa5.24□□□□□ -1.57
SLIRP-208ENST00000556956 CCDC116Q8IYX3 515 aa5.24□□□□□ -1.57
SLIRP-208ENST00000556956 GTPBP3Q969Y2 492 aaKnown RBP5.24□□□□□ -1.57
SLIRP-208ENST00000556956 TPSG1Q9NRR2 321 aa5.24□□□□□ -1.57
SLIRP-208ENST00000556956 RELBQ01201 579 aa5.23□□□□□ -1.57
SLIRP-208ENST00000556956 PCDHGC3Q9UN70 934 aa5.23□□□□□ -1.57
SLIRP-208ENST00000556956 COL17A1Q9UMD9 1497 aaPredicted RBP5.22□□□□□ -1.57
SLIRP-208ENST00000556956 GNB5O14775 395 aa5.22□□□□□ -1.57
SLIRP-208ENST00000556956 FOXR1Q6PIV2 292 aa5.22□□□□□ -1.57
SLIRP-208ENST00000556956 C6orf229H3BNL8 230 aa5.21□□□□□ -1.58
SLIRP-208ENST00000556956 GNPATO15228 680 aa5.21□□□□□ -1.58
SLIRP-208ENST00000556956 AGERQ15109 404 aa5.21□□□□□ -1.58
SLIRP-208ENST00000556956 PPP1R26Q5T8A7 1209 aaPredicted RBP5.21□□□□□ -1.58
SLIRP-208ENST00000556956 FOXD4L5Q5VV16 416 aaPredicted RBP5.21□□□□□ -1.58
SLIRP-208ENST00000556956 RIC3Q7Z5B4 369 aa5.21□□□□□ -1.58
SLIRP-208ENST00000556956 EDARADDQ8WWZ3 215 aa5.21□□□□□ -1.58
SLIRP-208ENST00000556956 NISCHQ9Y2I1 1504 aa5.2□□□□□ -1.58
SLIRP-208ENST00000556956 RBM26Q5T8P6 1007 aaKnown RBP5.2□□□□□ -1.58
SLIRP-208ENST00000556956 VASH1Q7L8A9 365 aaPredicted RBP5.2□□□□□ -1.58
SLIRP-208ENST00000556956 ZNF395Q9H8N7 513 aaPredicted RBP5.2□□□□□ -1.58
SLIRP-208ENST00000556956 RHOQP17081 205 aa5.19□□□□□ -1.58
SLIRP-208ENST00000556956 CTHP32929 405 aa5.19□□□□□ -1.58
SLIRP-208ENST00000556956 GPIHBP1Q8IV16 184 aa5.19□□□□□ -1.58
SLIRP-208ENST00000556956 GMCL1Q96IK5 515 aa5.19□□□□□ -1.58
SLIRP-208ENST00000556956 C1QTNF2Q9BXJ5 285 aa5.19□□□□□ -1.58
SLIRP-208ENST00000556956 NSFL1CQ9UNZ2 370 aaKnown RBP5.19□□□□□ -1.58
SLIRP-208ENST00000556956 MAP4K5Q9Y4K4 846 aa5.19□□□□□ -1.58
SLIRP-208ENST00000556956 PRPF38BQ5VTL8 546 aaKnown RBP5.18□□□□□ -1.58
SLIRP-208ENST00000556956 GIGYF2Q6Y7W6 1299 aaKnown RBP5.18□□□□□ -1.58
SLIRP-208ENST00000556956 RIPOR1Q6ZS17 1223 aa5.18□□□□□ -1.58
SLIRP-208ENST00000556956 GPR37O15354 613 aa5.17□□□□□ -1.58
SLIRP-208ENST00000556956 AMPD1P23109 780 aa5.17□□□□□ -1.58
SLIRP-208ENST00000556956 BPHLQ86WA6 291 aaPredicted RBP5.17□□□□□ -1.58
SLIRP-208ENST00000556956 KLRG1Q96E93 195 aa5.17□□□□□ -1.58
SLIRP-208ENST00000556956 TRERF1Q96PN7 1200 aa5.17□□□□□ -1.58
SLIRP-208ENST00000556956 PGPEP1Q9NXJ5 209 aa5.17□□□□□ -1.58
SLIRP-208ENST00000556956 MAP10Q9P2G4 905 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms