RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 FAM83GA6ND36 823 aa31.67■■■□□ 2.66
SIX4-203ENST00000556952 ZC3H6P61129 1189 aaKnown RBP31.67■■■□□ 2.66
SIX4-203ENST00000556952 FNBP4Q8N3X1 1017 aaPredicted RBP31.67■■■□□ 2.66
SIX4-203ENST00000556952 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.66■■■□□ 2.66
SIX4-203ENST00000556952 NFAT5O94916 1531 aa31.66■■■□□ 2.66
SIX4-203ENST00000556952 HNRNPUQ00839 825 aaKnown RBP eCLIP31.66■■■□□ 2.66
SIX4-203ENST00000556952 POTEAQ6S8J7 498 aa31.66■■■□□ 2.66
SIX4-203ENST00000556952 EMILIN1Q9Y6C2 1016 aa31.66■■■□□ 2.66
SIX4-203ENST00000556952 PEAK1Q9H792 1746 aa31.66■■■□□ 2.66
SIX4-203ENST00000556952 FBLN1P23142 703 aa31.65■■■□□ 2.66
SIX4-203ENST00000556952 NRAPQ86VF7 1730 aa31.65■■■□□ 2.66
SIX4-203ENST00000556952 LTN1O94822 1766 aa31.65■■■□□ 2.66
SIX4-203ENST00000556952 BCL9LQ86UU0 1499 aa31.65■■■□□ 2.66
SIX4-203ENST00000556952 CENPBP07199 599 aaPredicted RBP31.64■■■□□ 2.66
SIX4-203ENST00000556952 RRS1Q15050 365 aaKnown RBP31.64■■■□□ 2.66
SIX4-203ENST00000556952 KIF24Q5T7B8 1368 aa31.64■■■□□ 2.66
SIX4-203ENST00000556952 ZNF772Q68DY9 489 aaPredicted RBP31.64■■■□□ 2.65
SIX4-203ENST00000556952 ADAMTS8Q9UP79 889 aa31.64■■■□□ 2.65
SIX4-203ENST00000556952 USP21Q9UK80 565 aa31.63■■■□□ 2.65
SIX4-203ENST00000556952 SOX12O15370 315 aa31.62■■■□□ 2.65
SIX4-203ENST00000556952 CHRNA2Q15822 529 aa31.62■■■□□ 2.65
SIX4-203ENST00000556952 KCNH5Q8NCM2 988 aa31.62■■■□□ 2.65
SIX4-203ENST00000556952 PRDM11Q9NQV5 511 aa31.62■■■□□ 2.65
SIX4-203ENST00000556952 LMO7Q8WWI1 1683 aa31.62■■■□□ 2.65
SIX4-203ENST00000556952 CPDO75976 1380 aa31.62■■■□□ 2.65
SIX4-203ENST00000556952 PPM1GO15355 546 aaPredicted RBP31.61■■■□□ 2.65
SIX4-203ENST00000556952 NUDCQ9Y266 331 aa31.61■■■□□ 2.65
SIX4-203ENST00000556952 DIAPH1O60610 1272 aaKnown RBP31.6■■■□□ 2.65
SIX4-203ENST00000556952 MAP3K19Q56UN5 1328 aa31.59■■■□□ 2.65
SIX4-203ENST00000556952 COL18A1P39060 1754 aa31.59■■■□□ 2.65
SIX4-203ENST00000556952 FLT4P35916 1363 aa31.58■■■□□ 2.65
SIX4-203ENST00000556952 ATRNO75882 1429 aa31.57■■■□□ 2.64
SIX4-203ENST00000556952 RTL1A6NKG5 1358 aa31.56■■■□□ 2.64
SIX4-203ENST00000556952 RGPD5Q99666 1765 aa31.56■■■□□ 2.64
SIX4-203ENST00000556952 BTG4Q9NY30 223 aa31.56■■■□□ 2.64
SIX4-203ENST00000556952 ZBED9Q6R2W3 1325 aa31.55■■■□□ 2.64
SIX4-203ENST00000556952 ZBTB7CA1YPR0 619 aa31.55■■■□□ 2.64
SIX4-203ENST00000556952 ILDR2Q71H61 639 aa31.55■■■□□ 2.64
SIX4-203ENST00000556952 UNC5CLQ8IV45 518 aa31.55■■■□□ 2.64
SIX4-203ENST00000556952 CAMTA1Q9Y6Y1 1673 aa31.54■■■□□ 2.64
SIX4-203ENST00000556952 QTRT2Q9H974 415 aaKnown RBP31.54■■■□□ 2.64
SIX4-203ENST00000556952 ARHGEF25Q86VW2 580 aa31.51■■■□□ 2.64
SIX4-203ENST00000556952 AMPHP49418 695 aa31.51■■■□□ 2.63
SIX4-203ENST00000556952 TRPC5Q9UL62 973 aaPredicted RBP31.51■■■□□ 2.63
SIX4-203ENST00000556952 U2AF1L5P0DN76 240 aaPredicted RBP31.5■■■□□ 2.63
SIX4-203ENST00000556952 U2AF1Q01081 240 aaKnown RBP eCLIP31.5■■■□□ 2.63
SIX4-203ENST00000556952 RGPD1P0DJD0 1748 aa31.49■■■□□ 2.63
SIX4-203ENST00000556952 IL13P35225 146 aa31.49■■■□□ 2.63
SIX4-203ENST00000556952 GLI3P10071 1580 aa31.49■■■□□ 2.63
SIX4-203ENST00000556952 U2SURPO15042 1029 aaKnown RBP31.48■■■□□ 2.63
SIX4-203ENST00000556952 ABCC6O95255 1503 aa31.45■■■□□ 2.63
SIX4-203ENST00000556952 HOXC9P31274 260 aa31.45■■■□□ 2.63
SIX4-203ENST00000556952 HSP90AB2PQ58FF8 381 aa31.45■■■□□ 2.63
SIX4-203ENST00000556952 COL5A2P05997 1499 aaPredicted RBP31.45■■■□□ 2.62
SIX4-203ENST00000556952 RXRBP28702 533 aa31.44■■■□□ 2.62
SIX4-203ENST00000556952 EIF4A2Q14240 407 aaKnown RBP31.44■■■□□ 2.62
SIX4-203ENST00000556952 AXIN2Q9Y2T1 843 aa31.44■■■□□ 2.62
SIX4-203ENST00000556952 RBM6P78332 1123 aaKnown RBP31.43■■■□□ 2.62
SIX4-203ENST00000556952 VPS72Q15906 364 aa31.43■■■□□ 2.62
SIX4-203ENST00000556952 RUNDC1Q96C34 613 aa31.43■■■□□ 2.62
SIX4-203ENST00000556952 PNNQ9H307 717 aaKnown RBP31.43■■■□□ 2.62
SIX4-203ENST00000556952 STRN4Q9NRL3 753 aa31.43■■■□□ 2.62
SIX4-203ENST00000556952 CCDC146Q8IYE0 955 aa31.43■■■□□ 2.62
SIX4-203ENST00000556952 IP6K1Q92551 441 aa31.42■■■□□ 2.62
SIX4-203ENST00000556952 GJD4Q96KN9 370 aaPredicted RBP31.41■■■□□ 2.62
SIX4-203ENST00000556952 FCHSD2O94868 740 aa31.39■■■□□ 2.62
SIX4-203ENST00000556952 NGEFQ8N5V2 710 aa31.39■■■□□ 2.62
SIX4-203ENST00000556952 CCDC9Q9Y3X0 531 aaKnown RBP31.39■■■□□ 2.62
SIX4-203ENST00000556952 RGS12O14924 1447 aa31.38■■■□□ 2.61
SIX4-203ENST00000556952 EVA1CP58658 441 aa31.36■■■□□ 2.61
SIX4-203ENST00000556952 LARP1Q6PKG0 1096 aaKnown RBP31.36■■■□□ 2.61
SIX4-203ENST00000556952 SPATA31A5Q5VU36 1347 aa31.35■■■□□ 2.61
SIX4-203ENST00000556952 SPATA31A7Q8IWB4 1347 aa31.35■■■□□ 2.61
SIX4-203ENST00000556952 PLEKHF1Q96S99 279 aa31.35■■■□□ 2.61
SIX4-203ENST00000556952 RSPH6AQ9H0K4 717 aa31.35■■■□□ 2.61
SIX4-203ENST00000556952 APAF1O14727 1248 aa31.34■■■□□ 2.61
SIX4-203ENST00000556952 MAPK8IP3Q9UPT6 1336 aa31.33■■■□□ 2.61
SIX4-203ENST00000556952 SPATA31A1Q5TZJ5 1347 aa31.31■■■□□ 2.6
SIX4-203ENST00000556952 NCBP3Q53F19 620 aaKnown RBP31.31■■■□□ 2.6
SIX4-203ENST00000556952 IGSF1Q8N6C5 1336 aa31.31■■■□□ 2.6
SIX4-203ENST00000556952 FAM208AQ9UK61 1670 aaKnown RBP31.3■■■□□ 2.6
SIX4-203ENST00000556952 WDR17Q8IZU2 1322 aa31.3■■■□□ 2.6
SIX4-203ENST00000556952 BRWD3Q6RI45 1802 aa31.3■■■□□ 2.6
SIX4-203ENST00000556952 CRB1P82279 1406 aa31.3■■■□□ 2.6
SIX4-203ENST00000556952 NEFMP07197 916 aa31.3■■■□□ 2.6
SIX4-203ENST00000556952 TCP11L2Q8N4U5 519 aa31.3■■■□□ 2.6
SIX4-203ENST00000556952 SENP3-EIF4A1A0A087X0R7 540 aa31.29■■■□□ 2.6
SIX4-203ENST00000556952 HMOX1P09601 288 aa31.29■■■□□ 2.6
SIX4-203ENST00000556952 KDRP35968 1356 aa31.29■■■□□ 2.6
SIX4-203ENST00000556952 PRKAR2BP31323 418 aa31.28■■■□□ 2.6
SIX4-203ENST00000556952 USP35Q9P2H5 1018 aa31.28■■■□□ 2.6
SIX4-203ENST00000556952 RGPD2P0DJD1 1756 aa31.28■■■□□ 2.6
SIX4-203ENST00000556952 ERBB3P21860 1342 aa31.28■■■□□ 2.6
SIX4-203ENST00000556952 WNK3Q9BYP7 1800 aa31.28■■■□□ 2.6
SIX4-203ENST00000556952 PDE3BQ13370 1112 aa31.27■■■□□ 2.6
SIX4-203ENST00000556952 SALL2Q9Y467 1007 aaPredicted RBP31.27■■■□□ 2.6
SIX4-203ENST00000556952 THSD7AQ9UPZ6 1657 aa31.27■■■□□ 2.6
SIX4-203ENST00000556952 FAM98CQ17RN3 349 aaKnown RBP31.26■■■□□ 2.6
SIX4-203ENST00000556952 SULT6B1Q6IMI4 303 aa31.26■■■□□ 2.59
SIX4-203ENST00000556952 EYA1Q99502 592 aa31.26■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms