RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 OVOS2Q6IE36 1432 aa18.6■□□□□ 0.57
PSEN1-219ENST00000556951 EVA1CP58658 441 aa18.6■□□□□ 0.57
PSEN1-219ENST00000556951 PHRF1Q9P1Y6 1649 aaKnown RBP18.6■□□□□ 0.57
PSEN1-219ENST00000556951 ADCY9O60503 1353 aa18.59■□□□□ 0.57
PSEN1-219ENST00000556951 TCP11L2Q8N4U5 519 aa18.59■□□□□ 0.57
PSEN1-219ENST00000556951 ZNF526Q8TF50 670 aaPredicted RBP18.59■□□□□ 0.57
PSEN1-219ENST00000556951 KDM2AQ9Y2K7 1162 aa18.59■□□□□ 0.57
PSEN1-219ENST00000556951 YBX3P16989 372 aaKnown RBP eCLIP18.58■□□□□ 0.56
PSEN1-219ENST00000556951 PTF1AQ7RTS3 328 aa18.58■□□□□ 0.56
PSEN1-219ENST00000556951 JMYQ8N9B5 988 aa18.58■□□□□ 0.56
PSEN1-219ENST00000556951 POLR3AO14802 1390 aaPredicted RBP18.57■□□□□ 0.56
PSEN1-219ENST00000556951 KLHL34Q8N239 644 aa18.57■□□□□ 0.56
PSEN1-219ENST00000556951 CDK19Q9BWU1 502 aa18.57■□□□□ 0.56
PSEN1-219ENST00000556951 ACEP12821 1306 aa18.56■□□□□ 0.56
PSEN1-219ENST00000556951 PLEKHG3A1L390 1219 aa18.56■□□□□ 0.56
PSEN1-219ENST00000556951 DCAF11Q8TEB1 546 aa18.56■□□□□ 0.56
PSEN1-219ENST00000556951 WDR90Q96KV7 1748 aa18.56■□□□□ 0.56
PSEN1-219ENST00000556951 CPDO75976 1380 aa18.55■□□□□ 0.56
PSEN1-219ENST00000556951 LMO7Q8WWI1 1683 aa18.55■□□□□ 0.56
PSEN1-219ENST00000556951 KIF3CO14782 793 aa18.55■□□□□ 0.56
PSEN1-219ENST00000556951 TXNRD1Q16881 649 aa18.55■□□□□ 0.56
PSEN1-219ENST00000556951 NLGN2Q8NFZ4 835 aa18.55■□□□□ 0.56
PSEN1-219ENST00000556951 THRAP3Q9Y2W1 955 aaKnown RBP18.55■□□□□ 0.56
PSEN1-219ENST00000556951 AATKQ6ZMQ8 1374 aa18.55■□□□□ 0.56
PSEN1-219ENST00000556951 USP19O94966 1318 aa18.54■□□□□ 0.56
PSEN1-219ENST00000556951 WWC3Q9ULE0 1092 aa18.54■□□□□ 0.56
PSEN1-219ENST00000556951 COL24A1Q17RW2 1714 aa18.54■□□□□ 0.56
PSEN1-219ENST00000556951 KLRG1Q96E93 195 aa18.53■□□□□ 0.56
PSEN1-219ENST00000556951 CCDC61Q9Y6R9 512 aa18.53■□□□□ 0.56
PSEN1-219ENST00000556951 GCP02774 474 aa18.52■□□□□ 0.56
PSEN1-219ENST00000556951 ABTB2Q8N961 1025 aa18.52■□□□□ 0.56
PSEN1-219ENST00000556951 STAC3Q96MF2 364 aa18.51■□□□□ 0.55
PSEN1-219ENST00000556951 ITSN1Q15811 1721 aa18.51■□□□□ 0.55
PSEN1-219ENST00000556951 ARHGEF28Q8N1W1 1705 aaKnown RBP18.5■□□□□ 0.55
PSEN1-219ENST00000556951 TOPAZ1Q8N9V7 1692 aa18.49■□□□□ 0.55
PSEN1-219ENST00000556951 COL5A2P05997 1499 aaPredicted RBP18.48■□□□□ 0.55
PSEN1-219ENST00000556951 NLRP13Q86W25 1043 aa18.48■□□□□ 0.55
PSEN1-219ENST00000556951 LRRC37A3O60309 1634 aa18.47■□□□□ 0.55
PSEN1-219ENST00000556951 PAPPAQ13219 1627 aa18.46■□□□□ 0.55
PSEN1-219ENST00000556951 POLD1P28340 1107 aa18.46■□□□□ 0.55
PSEN1-219ENST00000556951 CRB1P82279 1406 aa18.46■□□□□ 0.55
PSEN1-219ENST00000556951 RAB3GAP2Q9H2M9 1393 aa18.45■□□□□ 0.54
PSEN1-219ENST00000556951 BCL9O00512 1426 aa18.44■□□□□ 0.54
PSEN1-219ENST00000556951 TOMM70O94826 608 aa18.44■□□□□ 0.54
PSEN1-219ENST00000556951 MARCH10Q8NA82 808 aaPredicted RBP18.44■□□□□ 0.54
PSEN1-219ENST00000556951 SLC16A10Q8TF71 515 aa18.43■□□□□ 0.54
PSEN1-219ENST00000556951 DDB1Q16531 1140 aa18.42■□□□□ 0.54
PSEN1-219ENST00000556951 AXIN2Q9Y2T1 843 aa18.42■□□□□ 0.54
PSEN1-219ENST00000556951 AKAP12Q02952 1782 aa18.42■□□□□ 0.54
PSEN1-219ENST00000556951 QSER1Q2KHR3 1735 aa18.41■□□□□ 0.54
PSEN1-219ENST00000556951 HTRA3P83110 453 aa18.41■□□□□ 0.54
PSEN1-219ENST00000556951 NBPF1Q3BBV0 1214 aa18.4■□□□□ 0.54
PSEN1-219ENST00000556951 COL18A1P39060 1754 aa18.39■□□□□ 0.53
PSEN1-219ENST00000556951 ZBTB7CA1YPR0 619 aa18.38■□□□□ 0.53
PSEN1-219ENST00000556951 NLRP6P59044 892 aa18.38■□□□□ 0.53
PSEN1-219ENST00000556951 CABP2Q9NPB3 220 aa18.38■□□□□ 0.53
PSEN1-219ENST00000556951 BRD4O60885 1362 aaPredicted RBP18.38■□□□□ 0.53
PSEN1-219ENST00000556951 PPIP5K1Q6PFW1 1433 aa18.38■□□□□ 0.53
PSEN1-219ENST00000556951 ZNF827Q17R98 1081 aa18.37■□□□□ 0.53
PSEN1-219ENST00000556951 TOM1L2Q6ZVM7 507 aa18.37■□□□□ 0.53
PSEN1-219ENST00000556951 SLIT3O75094 1523 aa18.37■□□□□ 0.53
PSEN1-219ENST00000556951 WDR17Q8IZU2 1322 aa18.36■□□□□ 0.53
PSEN1-219ENST00000556951 CABP1Q9NZU7 370 aa18.36■□□□□ 0.53
PSEN1-219ENST00000556951 SRPK2P78362 688 aaKnown RBP18.35■□□□□ 0.53
PSEN1-219ENST00000556951 USP6P35125 1406 aa18.34■□□□□ 0.53
PSEN1-219ENST00000556951 TNS2Q63HR2 1409 aa18.34■□□□□ 0.53
PSEN1-219ENST00000556951 ARHGEF25Q86VW2 580 aa18.34■□□□□ 0.53
PSEN1-219ENST00000556951 WNK3Q9BYP7 1800 aa18.34■□□□□ 0.53
PSEN1-219ENST00000556951 HSPA1AP0DMV8 641 aaKnown RBP18.33■□□□□ 0.52
PSEN1-219ENST00000556951 HSPA1BP0DMV9 641 aaKnown RBP18.33■□□□□ 0.52
PSEN1-219ENST00000556951 CDCA7Q9BWT1 371 aaPredicted RBP18.33■□□□□ 0.52
PSEN1-219ENST00000556951 CARD10Q9BWT7 1032 aa18.32■□□□□ 0.52
PSEN1-219ENST00000556951 CENPJQ9HC77 1338 aaPredicted RBP18.3■□□□□ 0.52
PSEN1-219ENST00000556951 KIAA1210Q9ULL0 1709 aa18.3■□□□□ 0.52
PSEN1-219ENST00000556951 EXOC5O00471 708 aa18.3■□□□□ 0.52
PSEN1-219ENST00000556951 NHSQ6T4R5 1651 aa18.29■□□□□ 0.52
PSEN1-219ENST00000556951 TUBGCP6Q96RT7 1819 aa18.29■□□□□ 0.52
PSEN1-219ENST00000556951 FAM161AQ3B820 660 aa18.29■□□□□ 0.52
PSEN1-219ENST00000556951 AKT1S1Q96B36 256 aa18.29■□□□□ 0.52
PSEN1-219ENST00000556951 PNPLA7Q6ZV29 1317 aa18.28■□□□□ 0.52
PSEN1-219ENST00000556951 RBM46Q8TBY0 533 aaKnown RBP18.28■□□□□ 0.52
PSEN1-219ENST00000556951 CPSF1Q10570 1443 aaKnown RBP18.28■□□□□ 0.52
PSEN1-219ENST00000556951 PIK3C2AO00443 1686 aa18.28■□□□□ 0.52
PSEN1-219ENST00000556951 RGPD5Q99666 1765 aa18.27■□□□□ 0.51
PSEN1-219ENST00000556951 TTC21BQ7Z4L5 1316 aa18.26■□□□□ 0.51
PSEN1-219ENST00000556951 LRRC4BQ9NT99 713 aa18.26■□□□□ 0.51
PSEN1-219ENST00000556951 KCNH5Q8NCM2 988 aa18.24■□□□□ 0.51
PSEN1-219ENST00000556951 ACSBG1Q96GR2 724 aa18.24■□□□□ 0.51
PSEN1-219ENST00000556951 BTAF1O14981 1849 aa18.23■□□□□ 0.51
PSEN1-219ENST00000556951 CSB-PGBD3P0DP91 1061 aa18.23■□□□□ 0.51
PSEN1-219ENST00000556951 FSTL1Q12841 308 aa18.23■□□□□ 0.51
PSEN1-219ENST00000556951 CD2APQ9Y5K6 639 aa18.23■□□□□ 0.51
PSEN1-219ENST00000556951 CCDC7Q96M83 1385 aa18.22■□□□□ 0.51
PSEN1-219ENST00000556951 SOX12O15370 315 aa18.22■□□□□ 0.51
PSEN1-219ENST00000556951 CCER1Q8TC90 406 aaPredicted RBP18.22■□□□□ 0.51
PSEN1-219ENST00000556951 ZNF692Q9BU19 519 aaPredicted RBP18.22■□□□□ 0.51
PSEN1-219ENST00000556951 NMRK2Q9NPI5 230 aa18.22■□□□□ 0.51
PSEN1-219ENST00000556951 NFAT5O94916 1531 aa18.2■□□□□ 0.5
PSEN1-219ENST00000556951 TRPM1Q7Z4N2 1603 aa18.2■□□□□ 0.5
PSEN1-219ENST00000556951 QRICH2Q9H0J4 1663 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms