RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 BCL11BQ9C0K0 894 aaPredicted RBP13.09□□□□□ -0.31
HNRNPC-227ENST00000556897 SLIT3O75094 1523 aa13.08□□□□□ -0.31
HNRNPC-227ENST00000556897 PDGFDQ9GZP0 370 aaPredicted RBP13.08□□□□□ -0.32
HNRNPC-227ENST00000556897 AXIN2Q9Y2T1 843 aa13.08□□□□□ -0.32
HNRNPC-227ENST00000556897 SBF2Q86WG5 1849 aa13.08□□□□□ -0.32
HNRNPC-227ENST00000556897 RGPD3A6NKT7 1758 aaPredicted RBP13.07□□□□□ -0.32
HNRNPC-227ENST00000556897 RGPD4Q7Z3J3 1758 aa13.07□□□□□ -0.32
HNRNPC-227ENST00000556897 PROM2Q8N271 834 aa13.07□□□□□ -0.32
HNRNPC-227ENST00000556897 MARCH10Q8NA82 808 aaPredicted RBP13.07□□□□□ -0.32
HNRNPC-227ENST00000556897 WDR17Q8IZU2 1322 aa13.07□□□□□ -0.32
HNRNPC-227ENST00000556897 ZBTB7AO95365 584 aa13.06□□□□□ -0.32
HNRNPC-227ENST00000556897 QRICH2Q9H0J4 1663 aa13.05□□□□□ -0.32
HNRNPC-227ENST00000556897 COL18A1P39060 1754 aa13.05□□□□□ -0.32
HNRNPC-227ENST00000556897 CASZ1Q86V15 1759 aa13.05□□□□□ -0.32
HNRNPC-227ENST00000556897 SOX12O15370 315 aa13.05□□□□□ -0.32
HNRNPC-227ENST00000556897 CDCA7Q9BWT1 371 aaPredicted RBP13.05□□□□□ -0.32
HNRNPC-227ENST00000556897 PIK3C2AO00443 1686 aa13.05□□□□□ -0.32
HNRNPC-227ENST00000556897 CPSF1Q10570 1443 aaKnown RBP13.05□□□□□ -0.32
HNRNPC-227ENST00000556897 CSB-PGBD3P0DP91 1061 aa13.04□□□□□ -0.32
HNRNPC-227ENST00000556897 ARHGEF25Q86VW2 580 aa13.04□□□□□ -0.32
HNRNPC-227ENST00000556897 BCL9O00512 1426 aa13.04□□□□□ -0.32
HNRNPC-227ENST00000556897 PTGER2P43116 358 aa13.03□□□□□ -0.32
HNRNPC-227ENST00000556897 ATF5Q9Y2D1 282 aaPredicted RBP13.03□□□□□ -0.32
HNRNPC-227ENST00000556897 WNK3Q9BYP7 1800 aa13.03□□□□□ -0.32
HNRNPC-227ENST00000556897 TXNRD1Q16881 649 aa13.02□□□□□ -0.33
HNRNPC-227ENST00000556897 KCNH5Q8NCM2 988 aa13.02□□□□□ -0.33
HNRNPC-227ENST00000556897 CARD10Q9BWT7 1032 aa13.02□□□□□ -0.33
HNRNPC-227ENST00000556897 STK32BQ9NY57 414 aa13.02□□□□□ -0.33
HNRNPC-227ENST00000556897 TTC21BQ7Z4L5 1316 aa13.02□□□□□ -0.33
HNRNPC-227ENST00000556897 EVC2Q86UK5 1308 aa13.02□□□□□ -0.33
HNRNPC-227ENST00000556897 MYOM1P52179 1685 aa13.02□□□□□ -0.33
HNRNPC-227ENST00000556897 AKAP12Q02952 1782 aa13.02□□□□□ -0.33
HNRNPC-227ENST00000556897 EXOC5O00471 708 aa13.01□□□□□ -0.33
HNRNPC-227ENST00000556897 RGPD5Q99666 1765 aa13.01□□□□□ -0.33
HNRNPC-227ENST00000556897 SLC15A2Q16348 729 aa13□□□□□ -0.33
HNRNPC-227ENST00000556897 ZNF692Q9BU19 519 aaPredicted RBP13□□□□□ -0.33
HNRNPC-227ENST00000556897 L3MBTL2Q969R5 705 aa12.99□□□□□ -0.33
HNRNPC-227ENST00000556897 FHDC1Q9C0D6 1143 aaPredicted RBP12.99□□□□□ -0.33
HNRNPC-227ENST00000556897 TTC21AQ8NDW8 1320 aa12.98□□□□□ -0.33
HNRNPC-227ENST00000556897 ZNF784Q8NCA9 323 aaPredicted RBP12.98□□□□□ -0.33
HNRNPC-227ENST00000556897 SYT17Q9BSW7 474 aa12.98□□□□□ -0.33
HNRNPC-227ENST00000556897 MTFR1LQ9H019 292 aa12.98□□□□□ -0.33
HNRNPC-227ENST00000556897 NFAT5O94916 1531 aa12.98□□□□□ -0.33
HNRNPC-227ENST00000556897 TNS2Q63HR2 1409 aa12.97□□□□□ -0.33
HNRNPC-227ENST00000556897 CCDC7Q96M83 1385 aa12.97□□□□□ -0.33
HNRNPC-227ENST00000556897 TRPM1Q7Z4N2 1603 aa12.97□□□□□ -0.33
HNRNPC-227ENST00000556897 ACSBG1Q96GR2 724 aa12.96□□□□□ -0.33
HNRNPC-227ENST00000556897 SGIP1Q9BQI5 828 aa12.96□□□□□ -0.33
HNRNPC-227ENST00000556897 KTN1Q86UP2 1357 aaKnown RBP12.95□□□□□ -0.34
HNRNPC-227ENST00000556897 NLRP2Q9NX02 1062 aa12.95□□□□□ -0.34
HNRNPC-227ENST00000556897 ROCK2O75116 1388 aaKnown RBP12.94□□□□□ -0.34
HNRNPC-227ENST00000556897 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.94□□□□□ -0.34
HNRNPC-227ENST00000556897 ABCC6O95255 1503 aa12.93□□□□□ -0.34
HNRNPC-227ENST00000556897 ERBB3P21860 1342 aa12.93□□□□□ -0.34
HNRNPC-227ENST00000556897 NHSQ6T4R5 1651 aa12.93□□□□□ -0.34
HNRNPC-227ENST00000556897 ARXQ96QS3 562 aa12.93□□□□□ -0.34
HNRNPC-227ENST00000556897 KAT6BQ8WYB5 2073 aa12.92□□□□□ -0.34
HNRNPC-227ENST00000556897 IL2RBP14784 551 aa12.92□□□□□ -0.34
HNRNPC-227ENST00000556897 NME9Q86XW9 330 aa12.92□□□□□ -0.34
HNRNPC-227ENST00000556897 SIN3AQ96ST3 1273 aa12.92□□□□□ -0.34
HNRNPC-227ENST00000556897 PAPPAQ13219 1627 aa12.91□□□□□ -0.34
HNRNPC-227ENST00000556897 ZNF827Q17R98 1081 aa12.91□□□□□ -0.34
HNRNPC-227ENST00000556897 USP31Q70CQ4 1352 aa12.91□□□□□ -0.34
HNRNPC-227ENST00000556897 MON2Q7Z3U7 1717 aa12.91□□□□□ -0.34
HNRNPC-227ENST00000556897 NEUROD1Q13562 356 aa12.9□□□□□ -0.34
HNRNPC-227ENST00000556897 ANKRD24Q8TF21 1146 aa12.9□□□□□ -0.34
HNRNPC-227ENST00000556897 LRRC4BQ9NT99 713 aa12.9□□□□□ -0.34
HNRNPC-227ENST00000556897 SBNO2Q9Y2G9 1366 aa12.9□□□□□ -0.34
HNRNPC-227ENST00000556897 GOLGB1Q14789 3259 aaKnown RBP12.9□□□□□ -0.34
HNRNPC-227ENST00000556897 BTAF1O14981 1849 aa12.9□□□□□ -0.34
HNRNPC-227ENST00000556897 CHD4Q14839 1912 aa12.9□□□□□ -0.35
HNRNPC-227ENST00000556897 PPP4R3CPQ6ZMV5 832 aa12.89□□□□□ -0.35
HNRNPC-227ENST00000556897 TMC1Q8TDI8 760 aa12.89□□□□□ -0.35
HNRNPC-227ENST00000556897 MAP3K5Q99683 1374 aa12.89□□□□□ -0.35
HNRNPC-227ENST00000556897 CD163L1Q9NR16 1453 aa12.89□□□□□ -0.35
HNRNPC-227ENST00000556897 LTN1O94822 1766 aa12.89□□□□□ -0.35
HNRNPC-227ENST00000556897 SENP3-EIF4A1A0A087X0R7 540 aa12.88□□□□□ -0.35
HNRNPC-227ENST00000556897 C1QTNF8P60827 252 aa12.87□□□□□ -0.35
HNRNPC-227ENST00000556897 GPR162Q16538 588 aa12.87□□□□□ -0.35
HNRNPC-227ENST00000556897 KLHL34Q8N239 644 aa12.87□□□□□ -0.35
HNRNPC-227ENST00000556897 AKT1S1Q96B36 256 aa12.87□□□□□ -0.35
HNRNPC-227ENST00000556897 SLC12A5Q9H2X9 1139 aa12.87□□□□□ -0.35
HNRNPC-227ENST00000556897 USP54Q70EL1 1684 aa12.86□□□□□ -0.35
HNRNPC-227ENST00000556897 HDGFL2Q7Z4V5 671 aaPredicted RBP12.86□□□□□ -0.35
HNRNPC-227ENST00000556897 DDX54Q8TDD1 881 aaKnown RBP12.86□□□□□ -0.35
HNRNPC-227ENST00000556897 KCNQ4P56696 695 aa12.85□□□□□ -0.35
HNRNPC-227ENST00000556897 SLC27A3Q5K4L6 730 aa12.85□□□□□ -0.35
HNRNPC-227ENST00000556897 LTV1Q96GA3 475 aaPredicted RBP12.85□□□□□ -0.35
HNRNPC-227ENST00000556897 PNPLA7Q6ZV29 1317 aa12.85□□□□□ -0.35
HNRNPC-227ENST00000556897 POLD1P28340 1107 aa12.84□□□□□ -0.35
HNRNPC-227ENST00000556897 PELP1Q8IZL8 1130 aaKnown RBP12.84□□□□□ -0.35
HNRNPC-227ENST00000556897 SLC16A10Q8TF71 515 aa12.84□□□□□ -0.35
HNRNPC-227ENST00000556897 SYTL4Q96C24 671 aaPredicted RBP12.84□□□□□ -0.35
HNRNPC-227ENST00000556897 CARD11Q9BXL7 1154 aa12.84□□□□□ -0.35
HNRNPC-227ENST00000556897 TFCP2L1Q9NZI6 479 aa12.84□□□□□ -0.35
HNRNPC-227ENST00000556897 EDC4Q6P2E9 1401 aaKnown RBP12.84□□□□□ -0.35
HNRNPC-227ENST00000556897 A0A1W2PP64 1363 aa12.83□□□□□ -0.36
HNRNPC-227ENST00000556897 PRIM1P49642 420 aaKnown RBP12.83□□□□□ -0.36
HNRNPC-227ENST00000556897 IP6K1Q92551 441 aa12.83□□□□□ -0.36
HNRNPC-227ENST00000556897 TERF2IPQ9NYB0 399 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms