RNA–Protein interactions for RNA: ENST00000556876.1

CHGA-206, Transcript of chromogranin A, humanhuman

TSL 2

Gene CHGA, Length 912 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-206ENST00000556876 OVOS2A0A0J9YW53 1432 aa24.33■■□□□ 1.49
CHGA-206ENST00000556876 OVOS2Q6IE36 1432 aa24.33■■□□□ 1.49
CHGA-206ENST00000556876 CSB-PGBD3P0DP91 1061 aa24.32■■□□□ 1.48
CHGA-206ENST00000556876 PLSCR1O15162 318 aa24.31■■□□□ 1.48
CHGA-206ENST00000556876 HDGFL2Q7Z4V5 671 aaPredicted RBP24.31■■□□□ 1.48
CHGA-206ENST00000556876 AXIN2Q9Y2T1 843 aa24.3■■□□□ 1.48
CHGA-206ENST00000556876 BCL11BQ9C0K0 894 aaPredicted RBP24.29■■□□□ 1.48
CHGA-206ENST00000556876 TONSLQ96HA7 1378 aa24.29■■□□□ 1.48
CHGA-206ENST00000556876 EXOC5O00471 708 aa24.28■■□□□ 1.48
CHGA-206ENST00000556876 TERF2IPQ9NYB0 399 aa24.28■■□□□ 1.48
CHGA-206ENST00000556876 BCL9O00512 1426 aa24.27■■□□□ 1.48
CHGA-206ENST00000556876 TNS1Q9HBL0 1735 aaKnown RBP24.27■■□□□ 1.48
CHGA-206ENST00000556876 USP31Q70CQ4 1352 aa24.27■■□□□ 1.48
CHGA-206ENST00000556876 CCDC7Q96M83 1385 aa24.27■■□□□ 1.48
CHGA-206ENST00000556876 PARP4Q9UKK3 1724 aaKnown RBP24.25■■□□□ 1.47
CHGA-206ENST00000556876 TMC1Q8TDI8 760 aa24.25■■□□□ 1.47
CHGA-206ENST00000556876 SOX12O15370 315 aa24.24■■□□□ 1.47
CHGA-206ENST00000556876 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.23■■□□□ 1.47
CHGA-206ENST00000556876 ABCC6O95255 1503 aa24.23■■□□□ 1.47
CHGA-206ENST00000556876 PIK3C2AO00443 1686 aa24.23■■□□□ 1.47
CHGA-206ENST00000556876 NINLQ9Y2I6 1382 aa24.2■■□□□ 1.46
CHGA-206ENST00000556876 MARCH10Q8NA82 808 aaPredicted RBP24.2■■□□□ 1.46
CHGA-206ENST00000556876 SPON1Q9HCB6 807 aa24.2■■□□□ 1.46
CHGA-206ENST00000556876 EDC4Q6P2E9 1401 aaKnown RBP24.18■■□□□ 1.46
CHGA-206ENST00000556876 SLC12A5Q9H2X9 1139 aa24.18■■□□□ 1.46
CHGA-206ENST00000556876 COL18A1P39060 1754 aa24.17■■□□□ 1.46
CHGA-206ENST00000556876 KCNQ2O43526 872 aa24.16■■□□□ 1.46
CHGA-206ENST00000556876 NME9Q86XW9 330 aa24.16■■□□□ 1.46
CHGA-206ENST00000556876 NFAT5O94916 1531 aa24.15■■□□□ 1.46
CHGA-206ENST00000556876 ERBB3P21860 1342 aa24.15■■□□□ 1.46
CHGA-206ENST00000556876 DCAF8L1A6NGE4 600 aa24.15■■□□□ 1.46
CHGA-206ENST00000556876 NLRP2Q9NX02 1062 aa24.15■■□□□ 1.46
CHGA-206ENST00000556876 PPP1R1BQ9UD71 204 aaPredicted RBP24.15■■□□□ 1.46
CHGA-206ENST00000556876 AKAP12Q02952 1782 aa24.15■■□□□ 1.46
CHGA-206ENST00000556876 IL2RBP14784 551 aa24.14■■□□□ 1.45
CHGA-206ENST00000556876 RREB1Q92766 1687 aa24.12■■□□□ 1.45
CHGA-206ENST00000556876 LRRC37A3O60309 1634 aa24.11■■□□□ 1.45
CHGA-206ENST00000556876 PEAK1Q9H792 1746 aa24.11■■□□□ 1.45
CHGA-206ENST00000556876 ANKRD24Q8TF21 1146 aa24.11■■□□□ 1.45
CHGA-206ENST00000556876 CD163L1Q9NR16 1453 aa24.11■■□□□ 1.45
CHGA-206ENST00000556876 TNS2Q63HR2 1409 aa24.1■■□□□ 1.45
CHGA-206ENST00000556876 ST20-MTHFSA0A0A6YYL1 179 aa24.09■■□□□ 1.45
CHGA-206ENST00000556876 IP6K1Q92551 441 aa24.09■■□□□ 1.45
CHGA-206ENST00000556876 COG3Q96JB2 828 aa24.09■■□□□ 1.45
CHGA-206ENST00000556876 STK32BQ9NY57 414 aa24.09■■□□□ 1.45
CHGA-206ENST00000556876 A0A1W2PP64 1363 aa24.08■■□□□ 1.45
CHGA-206ENST00000556876 TXNRD1Q16881 649 aa24.08■■□□□ 1.45
CHGA-206ENST00000556876 TESK2Q96S53 571 aa24.08■■□□□ 1.45
CHGA-206ENST00000556876 RGPD3A6NKT7 1758 aaPredicted RBP24.08■■□□□ 1.44
CHGA-206ENST00000556876 RGPD4Q7Z3J3 1758 aa24.08■■□□□ 1.44
CHGA-206ENST00000556876 MON2Q7Z3U7 1717 aa24.07■■□□□ 1.44
CHGA-206ENST00000556876 PROM2Q8N271 834 aa24.07■■□□□ 1.44
CHGA-206ENST00000556876 NUP188Q5SRE5 1749 aa24.07■■□□□ 1.44
CHGA-206ENST00000556876 TRIM26Q12899 539 aaPredicted RBP24.06■■□□□ 1.44
CHGA-206ENST00000556876 CDCA8Q53HL2 280 aa24.06■■□□□ 1.44
CHGA-206ENST00000556876 TMF1P82094 1093 aa24.04■■□□□ 1.44
CHGA-206ENST00000556876 PTF1AQ7RTS3 328 aa24.04■■□□□ 1.44
CHGA-206ENST00000556876 USP54Q70EL1 1684 aa24.03■■□□□ 1.44
CHGA-206ENST00000556876 SLC15A2Q16348 729 aa24.03■■□□□ 1.44
CHGA-206ENST00000556876 ANO8Q9HCE9 1232 aaPredicted RBP24.02■■□□□ 1.44
CHGA-206ENST00000556876 AMPHP49418 695 aa24■■□□□ 1.43
CHGA-206ENST00000556876 TIMELESSQ9UNS1 1208 aa24■■□□□ 1.43
CHGA-206ENST00000556876 ANKRD36BQ8N2N9 1353 aa24■■□□□ 1.43
CHGA-206ENST00000556876 SBF2Q86WG5 1849 aa23.98■■□□□ 1.43
CHGA-206ENST00000556876 HMGB2P26583 209 aaKnown RBP23.98■■□□□ 1.43
CHGA-206ENST00000556876 ACSBG1Q96GR2 724 aa23.97■■□□□ 1.43
CHGA-206ENST00000556876 WNK3Q9BYP7 1800 aa23.97■■□□□ 1.43
CHGA-206ENST00000556876 HOXC9P31274 260 aa23.96■■□□□ 1.43
CHGA-206ENST00000556876 SLC27A3Q5K4L6 730 aa23.96■■□□□ 1.43
CHGA-206ENST00000556876 MTFR1LQ9H019 292 aa23.96■■□□□ 1.43
CHGA-206ENST00000556876 CGNL1Q0VF96 1302 aa23.95■■□□□ 1.42
CHGA-206ENST00000556876 MAP3K19Q56UN5 1328 aa23.95■■□□□ 1.42
CHGA-206ENST00000556876 RGPD5Q99666 1765 aa23.95■■□□□ 1.42
CHGA-206ENST00000556876 LTV1Q96GA3 475 aaPredicted RBP23.94■■□□□ 1.42
CHGA-206ENST00000556876 RTL1A6NKG5 1358 aa23.93■■□□□ 1.42
CHGA-206ENST00000556876 ZBTB7AO95365 584 aa23.93■■□□□ 1.42
CHGA-206ENST00000556876 DDX54Q8TDD1 881 aaKnown RBP23.93■■□□□ 1.42
CHGA-206ENST00000556876 YY1P25490 414 aa23.92■■□□□ 1.42
CHGA-206ENST00000556876 USP47Q96K76 1375 aa23.91■■□□□ 1.42
CHGA-206ENST00000556876 FYB1O15117 783 aa23.91■■□□□ 1.42
CHGA-206ENST00000556876 ZCRB1Q8TBF4 217 aaKnown RBP23.91■■□□□ 1.42
CHGA-206ENST00000556876 PTGER2P43116 358 aa23.9■■□□□ 1.42
CHGA-206ENST00000556876 SLC16A10Q8TF71 515 aa23.89■■□□□ 1.41
CHGA-206ENST00000556876 ATF5Q9Y2D1 282 aaPredicted RBP23.89■■□□□ 1.41
CHGA-206ENST00000556876 SMG6Q86US8 1419 aaKnown RBP23.89■■□□□ 1.41
CHGA-206ENST00000556876 KIF24Q5T7B8 1368 aa23.89■■□□□ 1.41
CHGA-206ENST00000556876 LTN1O94822 1766 aa23.88■■□□□ 1.41
CHGA-206ENST00000556876 CLSPNQ9HAW4 1339 aa23.87■■□□□ 1.41
CHGA-206ENST00000556876 NHSQ6T4R5 1651 aa23.87■■□□□ 1.41
CHGA-206ENST00000556876 RAPGEF4Q8WZA2 1011 aa23.87■■□□□ 1.41
CHGA-206ENST00000556876 PDGFDQ9GZP0 370 aaPredicted RBP23.87■■□□□ 1.41
CHGA-206ENST00000556876 SYTL4Q96C24 671 aaPredicted RBP23.85■■□□□ 1.41
CHGA-206ENST00000556876 GGNBP2Q9H3C7 697 aa23.85■■□□□ 1.41
CHGA-206ENST00000556876 FAM208AQ9UK61 1670 aaKnown RBP23.85■■□□□ 1.41
CHGA-206ENST00000556876 PRIM1P49642 420 aaKnown RBP23.84■■□□□ 1.41
CHGA-206ENST00000556876 CASZ1Q86V15 1759 aa23.83■■□□□ 1.41
CHGA-206ENST00000556876 ARXQ96QS3 562 aa23.83■■□□□ 1.41
CHGA-206ENST00000556876 SYT17Q9BSW7 474 aa23.83■■□□□ 1.41
CHGA-206ENST00000556876 TATP17735 454 aaPredicted RBP23.82■■□□□ 1.4
CHGA-206ENST00000556876 RRS1Q15050 365 aaKnown RBP23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms