RNA–Protein interactions for RNA: ENST00000556849.2

PCNX1-214, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-214ENST00000556849 NUDT18Q6ZVK8 323 aa6.83□□□□□ -1.32
PCNX1-214ENST00000556849 SLF2Q8IX21 1173 aa6.83□□□□□ -1.32
PCNX1-214ENST00000556849 KIAA1522Q9P206 1035 aaPredicted RBP6.83□□□□□ -1.32
PCNX1-214ENST00000556849 CFAP43Q8NDM7 1665 aa6.83□□□□□ -1.32
PCNX1-214ENST00000556849 GOLGA6L3A6NEY3 463 aa6.82□□□□□ -1.32
PCNX1-214ENST00000556849 TMEM164Q5U3C3 297 aa6.82□□□□□ -1.32
PCNX1-214ENST00000556849 EXOC6Q8TAG9 804 aa6.82□□□□□ -1.32
PCNX1-214ENST00000556849 LRRN4Q8WUT4 740 aa6.82□□□□□ -1.32
PCNX1-214ENST00000556849 FAM198AQ9UFP1 575 aa6.82□□□□□ -1.32
PCNX1-214ENST00000556849 SPATA31E1Q6ZUB1 1445 aa6.82□□□□□ -1.32
PCNX1-214ENST00000556849 MIA2Q96PC5 1412 aa6.82□□□□□ -1.32
PCNX1-214ENST00000556849 KDM2BQ8NHM5 1336 aa6.81□□□□□ -1.32
PCNX1-214ENST00000556849 POTEFA5A3E0 1075 aa6.81□□□□□ -1.32
PCNX1-214ENST00000556849 FAM196BA6NMK8 535 aa6.81□□□□□ -1.32
PCNX1-214ENST00000556849 ESPNB1AK53 854 aa6.81□□□□□ -1.32
PCNX1-214ENST00000556849 XRCC6P12956 609 aaKnown RBP eCLIP6.81□□□□□ -1.32
PCNX1-214ENST00000556849 ZNF16P17020 682 aaPredicted RBP6.81□□□□□ -1.32
PCNX1-214ENST00000556849 SSFA2P28290 1259 aa6.81□□□□□ -1.32
PCNX1-214ENST00000556849 ZNF326Q5BKZ1 582 aaKnown RBP6.81□□□□□ -1.32
PCNX1-214ENST00000556849 CENPQQ7L2Z9 268 aaPredicted RBP6.81□□□□□ -1.32
PCNX1-214ENST00000556849 PACS2Q86VP3 889 aa6.81□□□□□ -1.32
PCNX1-214ENST00000556849 PNISRQ8TF01 805 aaKnown RBP6.81□□□□□ -1.32
PCNX1-214ENST00000556849 C8orf37Q96NL8 207 aa6.81□□□□□ -1.32
PCNX1-214ENST00000556849 BCL2L13Q9BXK5 485 aa6.81□□□□□ -1.32
PCNX1-214ENST00000556849 ZMIZ1Q9ULJ6 1067 aa6.81□□□□□ -1.32
PCNX1-214ENST00000556849 PCDHGC3Q9UN70 934 aa6.81□□□□□ -1.32
PCNX1-214ENST00000556849 NOVA2Q9UNW9 492 aaKnown RBP6.81□□□□□ -1.32
PCNX1-214ENST00000556849 ROCK2O75116 1388 aaKnown RBP6.81□□□□□ -1.32
PCNX1-214ENST00000556849 ZMYM3Q14202 1370 aa6.81□□□□□ -1.32
PCNX1-214ENST00000556849 DHX29Q7Z478 1369 aaKnown RBP6.81□□□□□ -1.32
PCNX1-214ENST00000556849 AQRO60306 1485 aaKnown RBP eCLIP6.8□□□□□ -1.32
PCNX1-214ENST00000556849 SOWAHDA6NJG2 315 aa6.8□□□□□ -1.32
PCNX1-214ENST00000556849 ST18O60284 1047 aa6.8□□□□□ -1.32
PCNX1-214ENST00000556849 TCF3P15923 654 aa6.8□□□□□ -1.32
PCNX1-214ENST00000556849 VAMP1P23763 118 aa6.8□□□□□ -1.32
PCNX1-214ENST00000556849 BECN1Q14457 450 aa6.8□□□□□ -1.32
PCNX1-214ENST00000556849 GRIPAP1Q4V328 841 aa6.8□□□□□ -1.32
PCNX1-214ENST00000556849 TAF7LQ5H9L4 462 aa6.8□□□□□ -1.32
PCNX1-214ENST00000556849 FMN1Q68DA7 1419 aa6.8□□□□□ -1.32
PCNX1-214ENST00000556849 PHLDB3Q6NSJ2 640 aa6.8□□□□□ -1.32
PCNX1-214ENST00000556849 PLEKHM2Q8IWE5 1019 aa6.8□□□□□ -1.32
PCNX1-214ENST00000556849 TSC1Q92574 1164 aa6.8□□□□□ -1.32
PCNX1-214ENST00000556849 TATDN2Q93075 761 aa6.8□□□□□ -1.32
PCNX1-214ENST00000556849 SCAPERQ9BY12 1400 aa6.8□□□□□ -1.32
PCNX1-214ENST00000556849 TSKSQ9UJT2 592 aa6.8□□□□□ -1.32
PCNX1-214ENST00000556849 RCAN3Q9UKA8 241 aa6.8□□□□□ -1.32
PCNX1-214ENST00000556849 PNMA3Q9UL41 463 aa6.8□□□□□ -1.32
PCNX1-214ENST00000556849 BRD4O60885 1362 aaPredicted RBP6.8□□□□□ -1.32
PCNX1-214ENST00000556849 PTPN23Q9H3S7 1636 aa6.79□□□□□ -1.32
PCNX1-214ENST00000556849 NR1H3Q13133 447 aa6.79□□□□□ -1.32
PCNX1-214ENST00000556849 CCDC125Q86Z20 511 aa6.79□□□□□ -1.32
PCNX1-214ENST00000556849 FAM177A1Q8N128 213 aaPredicted RBP6.79□□□□□ -1.32
PCNX1-214ENST00000556849 STK32AQ8WU08 396 aa6.79□□□□□ -1.32
PCNX1-214ENST00000556849 CLP1Q92989 425 aaKnown RBP6.79□□□□□ -1.32
PCNX1-214ENST00000556849 POGKQ9P215 609 aa6.79□□□□□ -1.32
PCNX1-214ENST00000556849 COLQQ9Y215 455 aaPredicted RBP6.79□□□□□ -1.32
PCNX1-214ENST00000556849 PPP1R3GB7ZBB8 358 aa6.78□□□□□ -1.32
PCNX1-214ENST00000556849 CFAP99D6REC4 459 aa6.78□□□□□ -1.32
PCNX1-214ENST00000556849 OFD1O75665 1012 aa6.78□□□□□ -1.32
PCNX1-214ENST00000556849 MARSP56192 900 aaKnown RBP6.78□□□□□ -1.32
PCNX1-214ENST00000556849 C8orf34Q49A92 452 aa6.78□□□□□ -1.32
PCNX1-214ENST00000556849 EPS8L1Q8TE68 723 aa6.78□□□□□ -1.32
PCNX1-214ENST00000556849 ZNF592Q92610 1267 aa6.78□□□□□ -1.32
PCNX1-214ENST00000556849 DRC1Q96MC2 740 aa6.78□□□□□ -1.32
PCNX1-214ENST00000556849 PLEKHH2Q8IVE3 1493 aa6.78□□□□□ -1.32
PCNX1-214ENST00000556849 KIF27Q86VH2 1401 aa6.77□□□□□ -1.33
PCNX1-214ENST00000556849 PSDA5PKW4 1024 aaPredicted RBP6.77□□□□□ -1.33
PCNX1-214ENST00000556849 USP17L3A6NCW0 530 aa6.77□□□□□ -1.33
PCNX1-214ENST00000556849 USP17L4A6NCW7 530 aa6.77□□□□□ -1.33
PCNX1-214ENST00000556849 TRIM6-TRIM34B2RNG4 842 aa6.77□□□□□ -1.33
PCNX1-214ENST00000556849 PTMSP20962 102 aa6.77□□□□□ -1.33
PCNX1-214ENST00000556849 HS1BP3Q53T59 392 aa6.77□□□□□ -1.33
PCNX1-214ENST00000556849 USP17L2Q6R6M4 530 aa6.77□□□□□ -1.33
PCNX1-214ENST00000556849 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.77□□□□□ -1.33
PCNX1-214ENST00000556849 USP17L1Q7RTZ2 530 aa6.77□□□□□ -1.33
PCNX1-214ENST00000556849 MYH16Q9H6N6 1097 aa6.77□□□□□ -1.33
PCNX1-214ENST00000556849 ANTXR1Q9H6X2 564 aa6.77□□□□□ -1.33
PCNX1-214ENST00000556849 BCL2L12Q9HB09 334 aa6.77□□□□□ -1.33
PCNX1-214ENST00000556849 KIF7Q2M1P5 1343 aa6.76□□□□□ -1.33
PCNX1-214ENST00000556849 NAIPQ13075 1403 aa6.76□□□□□ -1.33
PCNX1-214ENST00000556849 HECW1Q76N89 1606 aa6.76□□□□□ -1.33
PCNX1-214ENST00000556849 A0A0U1RQG5 324 aaPredicted RBP6.76□□□□□ -1.33
PCNX1-214ENST00000556849 C6orf229H3BNL8 230 aa6.76□□□□□ -1.33
PCNX1-214ENST00000556849 LZTS3O60299 673 aaPredicted RBP6.76□□□□□ -1.33
PCNX1-214ENST00000556849 COL9A1P20849 921 aa6.76□□□□□ -1.33
PCNX1-214ENST00000556849 NR6A1Q15406 480 aa6.76□□□□□ -1.33
PCNX1-214ENST00000556849 PPP4R3BQ5MIZ7 849 aa6.76□□□□□ -1.33
PCNX1-214ENST00000556849 TAF3Q5VWG9 929 aa6.76□□□□□ -1.33
PCNX1-214ENST00000556849 GIPC2Q8TF65 315 aa6.76□□□□□ -1.33
PCNX1-214ENST00000556849 SREK1Q8WXA9 508 aaKnown RBP6.76□□□□□ -1.33
PCNX1-214ENST00000556849 CDCA7Q9BWT1 371 aaPredicted RBP6.76□□□□□ -1.33
PCNX1-214ENST00000556849 FGD6Q6ZV73 1430 aa6.76□□□□□ -1.33
PCNX1-214ENST00000556849 USP17L15C9J2P7 530 aa6.75□□□□□ -1.33
PCNX1-214ENST00000556849 USP17L10C9JJH3 530 aa6.75□□□□□ -1.33
PCNX1-214ENST00000556849 USP17L13C9JLJ4 530 aa6.75□□□□□ -1.33
PCNX1-214ENST00000556849 USP17L12C9JPN9 530 aa6.75□□□□□ -1.33
PCNX1-214ENST00000556849 USP17L11C9JVI0 530 aa6.75□□□□□ -1.33
PCNX1-214ENST00000556849 USP17L21D6R901 530 aa6.75□□□□□ -1.33
PCNX1-214ENST00000556849 USP17L18D6R9N7 530 aa6.75□□□□□ -1.33
PCNX1-214ENST00000556849 USP17L22D6RA61 530 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms