RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 ZFAND3Q9H8U3 227 aa8.73□□□□□ -1.01
ATXN3-243ENST00000556671 PCMTD1Q96MG8 357 aaPredicted RBP8.72□□□□□ -1.01
ATXN3-243ENST00000556671 HMX1Q9NP08 348 aaPredicted RBP8.72□□□□□ -1.01
ATXN3-243ENST00000556671 BRPF1P55201 1214 aaPredicted RBP8.71□□□□□ -1.02
ATXN3-243ENST00000556671 SCARF1Q14162 830 aa8.71□□□□□ -1.02
ATXN3-243ENST00000556671 IL27Q8NEV9 243 aa8.71□□□□□ -1.02
ATXN3-243ENST00000556671 EPS8L1Q8TE68 723 aa8.71□□□□□ -1.02
ATXN3-243ENST00000556671 PURBQ96QR8 312 aaKnown RBP8.71□□□□□ -1.02
ATXN3-243ENST00000556671 OCSTAMPQ9BR26 566 aa8.7□□□□□ -1.02
ATXN3-243ENST00000556671 GPSM3Q9Y4H4 160 aa8.7□□□□□ -1.02
ATXN3-243ENST00000556671 PTK2Q05397 1052 aa8.69□□□□□ -1.02
ATXN3-243ENST00000556671 LCE2CQ5TA81 110 aa8.69□□□□□ -1.02
ATXN3-243ENST00000556671 CCDC116Q8IYX3 515 aa8.69□□□□□ -1.02
ATXN3-243ENST00000556671 NXF1Q9UBU9 619 aaKnown RBP8.69□□□□□ -1.02
ATXN3-243ENST00000556671 CDV3Q9UKY7 258 aaKnown RBP8.69□□□□□ -1.02
ATXN3-243ENST00000556671 ZBTB33Q86T24 672 aa8.68□□□□□ -1.02
ATXN3-243ENST00000556671 MEIOBQ8N635 442 aa8.68□□□□□ -1.02
ATXN3-243ENST00000556671 SLC10A4Q96EP9 437 aa8.68□□□□□ -1.02
ATXN3-243ENST00000556671 EMILIN1Q9Y6C2 1016 aa8.68□□□□□ -1.02
ATXN3-243ENST00000556671 WIPF1O43516 503 aa8.67□□□□□ -1.02
ATXN3-243ENST00000556671 TMEM259Q4ZIN3 620 aa8.67□□□□□ -1.02
ATXN3-243ENST00000556671 PNMA1Q8ND90 353 aa8.67□□□□□ -1.02
ATXN3-243ENST00000556671 NPAS3Q8IXF0 933 aa8.66□□□□□ -1.02
ATXN3-243ENST00000556671 LINC00528Q8N1L1 170 aa8.66□□□□□ -1.02
ATXN3-243ENST00000556671 ADAM32Q8TC27 787 aa8.66□□□□□ -1.02
ATXN3-243ENST00000556671 KCTD15Q96SI1 283 aaPredicted RBP8.66□□□□□ -1.02
ATXN3-243ENST00000556671 TPRNQ4KMQ1 711 aa8.65□□□□□ -1.02
ATXN3-243ENST00000556671 C6orf118Q5T5N4 469 aa8.65□□□□□ -1.02
ATXN3-243ENST00000556671 PPP1R26Q5T8A7 1209 aaPredicted RBP8.65□□□□□ -1.02
ATXN3-243ENST00000556671 TRIM34Q9BYJ4 488 aa8.65□□□□□ -1.02
ATXN3-243ENST00000556671 CC2D2AQ9P2K1 1620 aa8.65□□□□□ -1.03
ATXN3-243ENST00000556671 UPP2O95045 317 aa8.64□□□□□ -1.03
ATXN3-243ENST00000556671 SLC16A10Q8TF71 515 aa8.64□□□□□ -1.03
ATXN3-243ENST00000556671 SOBPA7XYQ1 873 aa8.63□□□□□ -1.03
ATXN3-243ENST00000556671 BMP2P12643 396 aa8.63□□□□□ -1.03
ATXN3-243ENST00000556671 INTS6LQ5JSJ4 861 aaKnown RBP8.63□□□□□ -1.03
ATXN3-243ENST00000556671 PGPEP1Q9NXJ5 209 aa8.63□□□□□ -1.03
ATXN3-243ENST00000556671 EIF4G1Q04637 1599 aaKnown RBP8.63□□□□□ -1.03
ATXN3-243ENST00000556671 H3BM21 787 aa8.62□□□□□ -1.03
ATXN3-243ENST00000556671 DHX9Q08211 1270 aaKnown RBP8.62□□□□□ -1.03
ATXN3-243ENST00000556671 Q6ZVU0 165 aa8.62□□□□□ -1.03
ATXN3-243ENST00000556671 GJD4Q96KN9 370 aaPredicted RBP8.62□□□□□ -1.03
ATXN3-243ENST00000556671 TSEN34Q9BSV6 310 aaKnown RBP8.62□□□□□ -1.03
ATXN3-243ENST00000556671 NBPF20Q3BBV1 942 aa8.61□□□□□ -1.03
ATXN3-243ENST00000556671 SOS2Q07890 1332 aaPredicted RBP8.6□□□□□ -1.03
ATXN3-243ENST00000556671 VEGFBP49765 207 aa8.6□□□□□ -1.03
ATXN3-243ENST00000556671 CBLBQ13191 982 aa8.6□□□□□ -1.03
ATXN3-243ENST00000556671 MAN1A2O60476 641 aa8.59□□□□□ -1.03
ATXN3-243ENST00000556671 DZIP3Q86Y13 1208 aaKnown RBP8.59□□□□□ -1.03
ATXN3-243ENST00000556671 IRF7Q92985 503 aa8.59□□□□□ -1.03
ATXN3-243ENST00000556671 INSM1Q01101 510 aaPredicted RBP8.58□□□□□ -1.04
ATXN3-243ENST00000556671 DNMT3LQ9UJW3 386 aa8.58□□□□□ -1.04
ATXN3-243ENST00000556671 ESPNB1AK53 854 aa8.57□□□□□ -1.04
ATXN3-243ENST00000556671 SOCS7O14512 581 aa8.57□□□□□ -1.04
ATXN3-243ENST00000556671 BANK1Q8NDB2 785 aa8.57□□□□□ -1.04
ATXN3-243ENST00000556671 CECR2Q9BXF3 1484 aa8.57□□□□□ -1.04
ATXN3-243ENST00000556671 ERBB4Q15303 1308 aa8.56□□□□□ -1.04
ATXN3-243ENST00000556671 ZBBXA8MT70 800 aa8.56□□□□□ -1.04
ATXN3-243ENST00000556671 SPINT1O43278 529 aa8.56□□□□□ -1.04
ATXN3-243ENST00000556671 GMPRP36959 345 aa8.56□□□□□ -1.04
ATXN3-243ENST00000556671 TMPRSS4Q9NRS4 437 aa8.56□□□□□ -1.04
ATXN3-243ENST00000556671 TTLL8A6PVC2 850 aa8.55□□□□□ -1.04
ATXN3-243ENST00000556671 ZNF784Q8NCA9 323 aaPredicted RBP8.55□□□□□ -1.04
ATXN3-243ENST00000556671 ERVH48-1M5A8F1 160 aa8.54□□□□□ -1.04
ATXN3-243ENST00000556671 FBXO45P0C2W1 286 aa8.54□□□□□ -1.04
ATXN3-243ENST00000556671 RAB15P59190 212 aa8.54□□□□□ -1.04
ATXN3-243ENST00000556671 SEPT12Q8IYM1 358 aa8.54□□□□□ -1.04
ATXN3-243ENST00000556671 VSIG8P0DPA2 414 aa8.53□□□□□ -1.04
ATXN3-243ENST00000556671 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.53□□□□□ -1.04
ATXN3-243ENST00000556671 MTMR14Q8NCE2 650 aa8.53□□□□□ -1.04
ATXN3-243ENST00000556671 AGBL1Q96MI9 1066 aa8.53□□□□□ -1.04
ATXN3-243ENST00000556671 STK17AQ9UEE5 414 aa8.53□□□□□ -1.04
ATXN3-243ENST00000556671 GPR37L1O60883 481 aa8.52□□□□□ -1.05
ATXN3-243ENST00000556671 LILRA1O75019 489 aa8.52□□□□□ -1.05
ATXN3-243ENST00000556671 PPFIA3O75145 1194 aa8.52□□□□□ -1.05
ATXN3-243ENST00000556671 RELBQ01201 579 aa8.52□□□□□ -1.05
ATXN3-243ENST00000556671 ADH1AP07327 375 aa8.51□□□□□ -1.05
ATXN3-243ENST00000556671 ADD1P35611 737 aaKnown RBP8.51□□□□□ -1.05
ATXN3-243ENST00000556671 SNRKQ9NRH2 765 aa8.51□□□□□ -1.05
ATXN3-243ENST00000556671 PCDHB9Q9Y5E1 797 aa8.51□□□□□ -1.05
ATXN3-243ENST00000556671 FIGNL2A6NMB9 653 aa8.5□□□□□ -1.05
ATXN3-243ENST00000556671 GIGYF1O75420 1035 aaPredicted RBP8.5□□□□□ -1.05
ATXN3-243ENST00000556671 LORP23490 312 aaPredicted RBP8.5□□□□□ -1.05
ATXN3-243ENST00000556671 NR1H3Q13133 447 aa8.5□□□□□ -1.05
ATXN3-243ENST00000556671 NDUFB9Q9Y6M9 179 aa8.5□□□□□ -1.05
ATXN3-243ENST00000556671 SMARCA4P51532 1647 aa8.5□□□□□ -1.05
ATXN3-243ENST00000556671 CTSOP43234 321 aaPredicted RBP8.49□□□□□ -1.05
ATXN3-243ENST00000556671 PTSQ03393 145 aa8.49□□□□□ -1.05
ATXN3-243ENST00000556671 KDF1Q8NAX2 398 aaPredicted RBP8.49□□□□□ -1.05
ATXN3-243ENST00000556671 INSM2Q96T92 566 aaPredicted RBP8.49□□□□□ -1.05
ATXN3-243ENST00000556671 APBB1O00213 710 aa8.48□□□□□ -1.05
ATXN3-243ENST00000556671 MCCD1P59942 119 aaPredicted RBP8.48□□□□□ -1.05
ATXN3-243ENST00000556671 ZNF395Q9H8N7 513 aaPredicted RBP8.48□□□□□ -1.05
ATXN3-243ENST00000556671 PTGIRP43119 386 aa8.47□□□□□ -1.05
ATXN3-243ENST00000556671 CCDC125Q86Z20 511 aa8.47□□□□□ -1.05
ATXN3-243ENST00000556671 RNF217Q8TC41 542 aa8.47□□□□□ -1.05
ATXN3-243ENST00000556671 TRIM52Q96A61 297 aa8.47□□□□□ -1.05
ATXN3-243ENST00000556671 CYLDQ9NQC7 956 aa8.47□□□□□ -1.05
ATXN3-243ENST00000556671 ZSCAN1Q8NBB4 408 aa8.46□□□□□ -1.06
ATXN3-243ENST00000556671 ZNF592Q92610 1267 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 151.4 ms