RNA–Protein interactions for RNA: ENST00000556527.1

CRX-203, Transcript of cone-rod homeobox, humanhuman

TSL 1 (best)

Gene CRX, Length 164 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-203ENST00000556527 CPSF1Q10570 1443 aaKnown RBP13.98□□□□□ -0.17
CRX-203ENST00000556527 NUP188Q5SRE5 1749 aa13.98□□□□□ -0.17
CRX-203ENST00000556527 TTC21AQ8NDW8 1320 aa13.98□□□□□ -0.17
CRX-203ENST00000556527 PLSCR1O15162 318 aa13.98□□□□□ -0.17
CRX-203ENST00000556527 TTC21BQ7Z4L5 1316 aa13.97□□□□□ -0.17
CRX-203ENST00000556527 YY1P25490 414 aa13.97□□□□□ -0.17
CRX-203ENST00000556527 KTN1Q86UP2 1357 aaKnown RBP13.96□□□□□ -0.17
CRX-203ENST00000556527 EXOC5O00471 708 aa13.96□□□□□ -0.17
CRX-203ENST00000556527 ARHGEF25Q86VW2 580 aa13.96□□□□□ -0.17
CRX-203ENST00000556527 CARD10Q9BWT7 1032 aa13.96□□□□□ -0.17
CRX-203ENST00000556527 AXIN2Q9Y2T1 843 aa13.96□□□□□ -0.17
CRX-203ENST00000556527 LRRC37A3O60309 1634 aa13.96□□□□□ -0.17
CRX-203ENST00000556527 TRPM1Q7Z4N2 1603 aa13.96□□□□□ -0.17
CRX-203ENST00000556527 PIK3C2AO00443 1686 aa13.95□□□□□ -0.18
CRX-203ENST00000556527 NINLQ9Y2I6 1382 aa13.95□□□□□ -0.18
CRX-203ENST00000556527 MARCH10Q8NA82 808 aaPredicted RBP13.94□□□□□ -0.18
CRX-203ENST00000556527 SIN3AQ96ST3 1273 aa13.94□□□□□ -0.18
CRX-203ENST00000556527 STK32BQ9NY57 414 aa13.94□□□□□ -0.18
CRX-203ENST00000556527 CCDC7Q96M83 1385 aa13.94□□□□□ -0.18
CRX-203ENST00000556527 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.93□□□□□ -0.18
CRX-203ENST00000556527 PEAK1Q9H792 1746 aa13.93□□□□□ -0.18
CRX-203ENST00000556527 RGPD3A6NKT7 1758 aaPredicted RBP13.92□□□□□ -0.18
CRX-203ENST00000556527 RGPD4Q7Z3J3 1758 aa13.92□□□□□ -0.18
CRX-203ENST00000556527 TMC1Q8TDI8 760 aa13.92□□□□□ -0.18
CRX-203ENST00000556527 NLRP2Q9NX02 1062 aa13.92□□□□□ -0.18
CRX-203ENST00000556527 ZBTB7AO95365 584 aa13.91□□□□□ -0.18
CRX-203ENST00000556527 HDGFL2Q7Z4V5 671 aaPredicted RBP13.91□□□□□ -0.18
CRX-203ENST00000556527 ANO8Q9HCE9 1232 aaPredicted RBP13.91□□□□□ -0.18
CRX-203ENST00000556527 BCL9O00512 1426 aa13.9□□□□□ -0.18
CRX-203ENST00000556527 TXNRD1Q16881 649 aa13.9□□□□□ -0.18
CRX-203ENST00000556527 PTF1AQ7RTS3 328 aa13.9□□□□□ -0.18
CRX-203ENST00000556527 CARD11Q9BXL7 1154 aa13.9□□□□□ -0.18
CRX-203ENST00000556527 AKAP12Q02952 1782 aa13.9□□□□□ -0.18
CRX-203ENST00000556527 COL18A1P39060 1754 aa13.89□□□□□ -0.19
CRX-203ENST00000556527 WNK3Q9BYP7 1800 aa13.88□□□□□ -0.19
CRX-203ENST00000556527 TERF2IPQ9NYB0 399 aa13.88□□□□□ -0.19
CRX-203ENST00000556527 ATF5Q9Y2D1 282 aaPredicted RBP13.88□□□□□ -0.19
CRX-203ENST00000556527 ABCC6O95255 1503 aa13.88□□□□□ -0.19
CRX-203ENST00000556527 TNS2Q63HR2 1409 aa13.88□□□□□ -0.19
CRX-203ENST00000556527 SBF2Q86WG5 1849 aa13.87□□□□□ -0.19
CRX-203ENST00000556527 NFAT5O94916 1531 aa13.87□□□□□ -0.19
CRX-203ENST00000556527 IL2RBP14784 551 aa13.87□□□□□ -0.19
CRX-203ENST00000556527 SLC15A2Q16348 729 aa13.87□□□□□ -0.19
CRX-203ENST00000556527 NME9Q86XW9 330 aa13.87□□□□□ -0.19
CRX-203ENST00000556527 PROM2Q8N271 834 aa13.87□□□□□ -0.19
CRX-203ENST00000556527 ACSBG1Q96GR2 724 aa13.87□□□□□ -0.19
CRX-203ENST00000556527 ERBB3P21860 1342 aa13.87□□□□□ -0.19
CRX-203ENST00000556527 SBNO2Q9Y2G9 1366 aa13.86□□□□□ -0.19
CRX-203ENST00000556527 ANKRD24Q8TF21 1146 aa13.85□□□□□ -0.19
CRX-203ENST00000556527 PDGFDQ9GZP0 370 aaPredicted RBP13.85□□□□□ -0.19
CRX-203ENST00000556527 MTFR1LQ9H019 292 aa13.85□□□□□ -0.19
CRX-203ENST00000556527 RGPD5Q99666 1765 aa13.85□□□□□ -0.19
CRX-203ENST00000556527 USP31Q70CQ4 1352 aa13.84□□□□□ -0.19
CRX-203ENST00000556527 TONSLQ96HA7 1378 aa13.83□□□□□ -0.19
CRX-203ENST00000556527 EDC4Q6P2E9 1401 aaKnown RBP13.83□□□□□ -0.2
CRX-203ENST00000556527 SLC12A5Q9H2X9 1139 aa13.83□□□□□ -0.2
CRX-203ENST00000556527 MON2Q7Z3U7 1717 aa13.83□□□□□ -0.2
CRX-203ENST00000556527 CASZ1Q86V15 1759 aa13.83□□□□□ -0.2
CRX-203ENST00000556527 PTGER2P43116 358 aa13.82□□□□□ -0.2
CRX-203ENST00000556527 FHDC1Q9C0D6 1143 aaPredicted RBP13.82□□□□□ -0.2
CRX-203ENST00000556527 DDX54Q8TDD1 881 aaKnown RBP13.81□□□□□ -0.2
CRX-203ENST00000556527 LTV1Q96GA3 475 aaPredicted RBP13.81□□□□□ -0.2
CRX-203ENST00000556527 NHSQ6T4R5 1651 aa13.81□□□□□ -0.2
CRX-203ENST00000556527 MYOM1P52179 1685 aa13.8□□□□□ -0.2
CRX-203ENST00000556527 SLC24A1O60721 1099 aa13.8□□□□□ -0.2
CRX-203ENST00000556527 SYTL4Q96C24 671 aaPredicted RBP13.8□□□□□ -0.2
CRX-203ENST00000556527 COG3Q96JB2 828 aa13.8□□□□□ -0.2
CRX-203ENST00000556527 ARXQ96QS3 562 aa13.8□□□□□ -0.2
CRX-203ENST00000556527 SYT17Q9BSW7 474 aa13.8□□□□□ -0.2
CRX-203ENST00000556527 A0A1W2PP64 1363 aa13.79□□□□□ -0.2
CRX-203ENST00000556527 CD163L1Q9NR16 1453 aa13.79□□□□□ -0.2
CRX-203ENST00000556527 LTN1O94822 1766 aa13.78□□□□□ -0.2
CRX-203ENST00000556527 AMPHP49418 695 aa13.78□□□□□ -0.2
CRX-203ENST00000556527 KLHL34Q8N239 644 aa13.78□□□□□ -0.2
CRX-203ENST00000556527 IP6K1Q92551 441 aa13.78□□□□□ -0.2
CRX-203ENST00000556527 PUS7Q96PZ0 661 aaKnown RBP13.78□□□□□ -0.2
CRX-203ENST00000556527 POLD1P28340 1107 aa13.77□□□□□ -0.21
CRX-203ENST00000556527 SLC27A3Q5K4L6 730 aa13.77□□□□□ -0.21
CRX-203ENST00000556527 USP54Q70EL1 1684 aa13.76□□□□□ -0.21
CRX-203ENST00000556527 TFCP2L1Q9NZI6 479 aa13.76□□□□□ -0.21
CRX-203ENST00000556527 GPR162Q16538 588 aa13.75□□□□□ -0.21
CRX-203ENST00000556527 ZNF827Q17R98 1081 aa13.75□□□□□ -0.21
CRX-203ENST00000556527 BTAF1O14981 1849 aa13.74□□□□□ -0.21
CRX-203ENST00000556527 PELP1Q8IZL8 1130 aaKnown RBP13.74□□□□□ -0.21
CRX-203ENST00000556527 ZNF784Q8NCA9 323 aaPredicted RBP13.74□□□□□ -0.21
CRX-203ENST00000556527 SLC16A10Q8TF71 515 aa13.74□□□□□ -0.21
CRX-203ENST00000556527 LRRC4BQ9NT99 713 aa13.74□□□□□ -0.21
CRX-203ENST00000556527 MAP3K19Q56UN5 1328 aa13.73□□□□□ -0.21
CRX-203ENST00000556527 ST20-MTHFSA0A0A6YYL1 179 aa13.73□□□□□ -0.21
CRX-203ENST00000556527 MSH5O43196 834 aa13.73□□□□□ -0.21
CRX-203ENST00000556527 HOXC9P31274 260 aa13.73□□□□□ -0.21
CRX-203ENST00000556527 PRIM1P49642 420 aaKnown RBP13.73□□□□□ -0.21
CRX-203ENST00000556527 ZCRB1Q8TBF4 217 aaKnown RBP13.73□□□□□ -0.21
CRX-203ENST00000556527 SGIP1Q9BQI5 828 aa13.73□□□□□ -0.21
CRX-203ENST00000556527 SMG6Q86US8 1419 aaKnown RBP13.73□□□□□ -0.21
CRX-203ENST00000556527 FAM208AQ9UK61 1670 aaKnown RBP13.72□□□□□ -0.21
CRX-203ENST00000556527 ANKRD36BQ8N2N9 1353 aa13.71□□□□□ -0.21
CRX-203ENST00000556527 MAP3K5Q99683 1374 aa13.71□□□□□ -0.21
CRX-203ENST00000556527 RAPGEF4Q8WZA2 1011 aa13.71□□□□□ -0.21
CRX-203ENST00000556527 AKT1S1Q96B36 256 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms