RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 OVOS2Q6IE36 1432 aa11.35□□□□□ -0.59
VTI1B-206ENST00000556461 USP54Q70EL1 1684 aa11.34□□□□□ -0.59
VTI1B-206ENST00000556461 FBLN1P23142 703 aa11.34□□□□□ -0.59
VTI1B-206ENST00000556461 TCP11L2Q8N4U5 519 aa11.34□□□□□ -0.59
VTI1B-206ENST00000556461 BARGINQ6ZT62 677 aa11.33□□□□□ -0.6
VTI1B-206ENST00000556461 CARD14Q9BXL6 1004 aa11.33□□□□□ -0.6
VTI1B-206ENST00000556461 EIF4G2P78344 907 aaKnown RBP eCLIP11.32□□□□□ -0.6
VTI1B-206ENST00000556461 TOM1L2Q6ZVM7 507 aa11.32□□□□□ -0.6
VTI1B-206ENST00000556461 DEFB132Q7Z7B7 95 aa11.32□□□□□ -0.6
VTI1B-206ENST00000556461 SRCAPQ6ZRS2 3230 aa11.32□□□□□ -0.6
VTI1B-206ENST00000556461 BLMP54132 1417 aaPredicted RBP11.32□□□□□ -0.6
VTI1B-206ENST00000556461 CRB1P82279 1406 aa11.32□□□□□ -0.6
VTI1B-206ENST00000556461 WDR17Q8IZU2 1322 aa11.32□□□□□ -0.6
VTI1B-206ENST00000556461 MYOM1P52179 1685 aa11.31□□□□□ -0.6
VTI1B-206ENST00000556461 FYB1O15117 783 aa11.31□□□□□ -0.6
VTI1B-206ENST00000556461 CDCA8Q53HL2 280 aa11.31□□□□□ -0.6
VTI1B-206ENST00000556461 POLR3GLQ9BT43 218 aa11.31□□□□□ -0.6
VTI1B-206ENST00000556461 GGNBP2Q9H3C7 697 aa11.31□□□□□ -0.6
VTI1B-206ENST00000556461 RGPD5Q99666 1765 aa11.31□□□□□ -0.6
VTI1B-206ENST00000556461 C11orf95C9JLR9 678 aaPredicted RBP11.3□□□□□ -0.6
VTI1B-206ENST00000556461 CSB-PGBD3P0DP91 1061 aa11.3□□□□□ -0.6
VTI1B-206ENST00000556461 CCDC125Q86Z20 511 aa11.3□□□□□ -0.6
VTI1B-206ENST00000556461 COG3Q96JB2 828 aa11.3□□□□□ -0.6
VTI1B-206ENST00000556461 THRAP3Q9Y2W1 955 aaKnown RBP11.3□□□□□ -0.6
VTI1B-206ENST00000556461 CARD10Q9BWT7 1032 aa11.29□□□□□ -0.6
VTI1B-206ENST00000556461 MAP3K19Q56UN5 1328 aa11.29□□□□□ -0.6
VTI1B-206ENST00000556461 NSD3Q9BZ95 1437 aa11.28□□□□□ -0.6
VTI1B-206ENST00000556461 ANKRD24Q8TF21 1146 aa11.28□□□□□ -0.6
VTI1B-206ENST00000556461 ABCC6O95255 1503 aa11.28□□□□□ -0.6
VTI1B-206ENST00000556461 ERBB3P21860 1342 aa11.28□□□□□ -0.6
VTI1B-206ENST00000556461 LTN1O94822 1766 aa11.27□□□□□ -0.61
VTI1B-206ENST00000556461 PDE3BQ13370 1112 aa11.27□□□□□ -0.61
VTI1B-206ENST00000556461 RRS1Q15050 365 aaKnown RBP11.27□□□□□ -0.61
VTI1B-206ENST00000556461 IP6K1Q92551 441 aa11.27□□□□□ -0.61
VTI1B-206ENST00000556461 LTV1Q96GA3 475 aaPredicted RBP11.27□□□□□ -0.61
VTI1B-206ENST00000556461 DISP2A7MBM2 1401 aa11.26□□□□□ -0.61
VTI1B-206ENST00000556461 TRIM37O94972 964 aa11.26□□□□□ -0.61
VTI1B-206ENST00000556461 HOXC9P31274 260 aa11.26□□□□□ -0.61
VTI1B-206ENST00000556461 FAM196AQ6ZSG2 479 aa11.26□□□□□ -0.61
VTI1B-206ENST00000556461 NLRP2Q9NX02 1062 aa11.26□□□□□ -0.61
VTI1B-206ENST00000556461 PARP4Q9UKK3 1724 aaKnown RBP11.26□□□□□ -0.61
VTI1B-206ENST00000556461 LRRC37A3O60309 1634 aa11.25□□□□□ -0.61
VTI1B-206ENST00000556461 SF3B2Q13435 895 aaKnown RBP11.25□□□□□ -0.61
VTI1B-206ENST00000556461 DDB1Q16531 1140 aa11.25□□□□□ -0.61
VTI1B-206ENST00000556461 MARCH10Q8NA82 808 aaPredicted RBP11.25□□□□□ -0.61
VTI1B-206ENST00000556461 AMPHP49418 695 aa11.24□□□□□ -0.61
VTI1B-206ENST00000556461 EN1Q05925 392 aaPredicted RBP11.24□□□□□ -0.61
VTI1B-206ENST00000556461 PTF1AQ7RTS3 328 aa11.24□□□□□ -0.61
VTI1B-206ENST00000556461 PANK3Q9H999 370 aa11.24□□□□□ -0.61
VTI1B-206ENST00000556461 CCDC7Q96M83 1385 aa11.24□□□□□ -0.61
VTI1B-206ENST00000556461 WNK3Q9BYP7 1800 aa11.23□□□□□ -0.61
VTI1B-206ENST00000556461 BAG6P46379 1132 aa11.23□□□□□ -0.61
VTI1B-206ENST00000556461 PEAK1Q9H792 1746 aa11.23□□□□□ -0.61
VTI1B-206ENST00000556461 TNS1Q9HBL0 1735 aaKnown RBP11.23□□□□□ -0.61
VTI1B-206ENST00000556461 KIF20BQ96Q89 1820 aa11.23□□□□□ -0.61
VTI1B-206ENST00000556461 EZH2Q15910 746 aaKnown RBP11.22□□□□□ -0.61
VTI1B-206ENST00000556461 KIF7Q2M1P5 1343 aa11.22□□□□□ -0.61
VTI1B-206ENST00000556461 HSP90AB2PQ58FF8 381 aa11.22□□□□□ -0.61
VTI1B-206ENST00000556461 CDCA7Q9BWT1 371 aaPredicted RBP11.22□□□□□ -0.61
VTI1B-206ENST00000556461 EMILIN1Q9Y6C2 1016 aa11.22□□□□□ -0.61
VTI1B-206ENST00000556461 RGPD1P0DJD0 1748 aa11.21□□□□□ -0.61
VTI1B-206ENST00000556461 OVOS2A0A0G2JMS6 1433 aa11.21□□□□□ -0.61
VTI1B-206ENST00000556461 EXOC5O00471 708 aa11.21□□□□□ -0.61
VTI1B-206ENST00000556461 APBA3O96018 575 aa11.21□□□□□ -0.61
VTI1B-206ENST00000556461 CAMKK2Q96RR4 588 aa11.21□□□□□ -0.61
VTI1B-206ENST00000556461 TNS2Q63HR2 1409 aa11.2□□□□□ -0.62
VTI1B-206ENST00000556461 RTL1A6NKG5 1358 aa11.2□□□□□ -0.62
VTI1B-206ENST00000556461 CGNL1Q0VF96 1302 aa11.2□□□□□ -0.62
VTI1B-206ENST00000556461 IL2RBP14784 551 aa11.2□□□□□ -0.62
VTI1B-206ENST00000556461 NBPF6Q5VWK0 638 aa11.2□□□□□ -0.62
VTI1B-206ENST00000556461 USHBP1Q8N6Y0 703 aa11.2□□□□□ -0.62
VTI1B-206ENST00000556461 NBPF4Q96M43 638 aa11.2□□□□□ -0.62
VTI1B-206ENST00000556461 TNNT2P45379 298 aaPredicted RBP11.19□□□□□ -0.62
VTI1B-206ENST00000556461 INSRP06213 1382 aa11.18□□□□□ -0.62
VTI1B-206ENST00000556461 FLT4P35916 1363 aa11.18□□□□□ -0.62
VTI1B-206ENST00000556461 FAM208AQ9UK61 1670 aaKnown RBP11.18□□□□□ -0.62
VTI1B-206ENST00000556461 KCNQ2O43526 872 aa11.18□□□□□ -0.62
VTI1B-206ENST00000556461 RGPD2P0DJD1 1756 aa11.18□□□□□ -0.62
VTI1B-206ENST00000556461 BCL9O00512 1426 aa11.18□□□□□ -0.62
VTI1B-206ENST00000556461 PSDA5PKW4 1024 aaPredicted RBP11.17□□□□□ -0.62
VTI1B-206ENST00000556461 PPM1GO15355 546 aaPredicted RBP11.17□□□□□ -0.62
VTI1B-206ENST00000556461 POLKQ9UBT6 870 aa11.17□□□□□ -0.62
VTI1B-206ENST00000556461 MEGF6O75095 1541 aa11.17□□□□□ -0.62
VTI1B-206ENST00000556461 ACSBG1Q96GR2 724 aa11.16□□□□□ -0.62
VTI1B-206ENST00000556461 BCL11BQ9C0K0 894 aaPredicted RBP11.16□□□□□ -0.62
VTI1B-206ENST00000556461 SBF2Q86WG5 1849 aa11.16□□□□□ -0.62
VTI1B-206ENST00000556461 KIF24Q5T7B8 1368 aa11.16□□□□□ -0.62
VTI1B-206ENST00000556461 WASHC2AQ641Q2 1341 aa11.15□□□□□ -0.62
VTI1B-206ENST00000556461 AMER1Q5JTC6 1135 aaPredicted RBP11.15□□□□□ -0.62
VTI1B-206ENST00000556461 DDX54Q8TDD1 881 aaKnown RBP11.15□□□□□ -0.62
VTI1B-206ENST00000556461 R3HDM1Q15032 1099 aaKnown RBP11.14□□□□□ -0.63
VTI1B-206ENST00000556461 PROM2Q8N271 834 aa11.14□□□□□ -0.63
VTI1B-206ENST00000556461 SMG6Q86US8 1419 aaKnown RBP11.14□□□□□ -0.63
VTI1B-206ENST00000556461 PARD3Q8TEW0 1356 aa11.14□□□□□ -0.63
VTI1B-206ENST00000556461 ANKRD26Q9UPS8 1709 aa11.13□□□□□ -0.63
VTI1B-206ENST00000556461 PER1O15534 1290 aaPredicted RBP11.13□□□□□ -0.63
VTI1B-206ENST00000556461 MORC1Q86VD1 984 aa11.13□□□□□ -0.63
VTI1B-206ENST00000556461 ZCRB1Q8TBF4 217 aaKnown RBP11.13□□□□□ -0.63
VTI1B-206ENST00000556461 KNSTRNQ9Y448 316 aa11.13□□□□□ -0.63
VTI1B-206ENST00000556461 RREB1Q92766 1687 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms