RNA–Protein interactions for RNA: ENST00000556417.5

LINC00520-204, long intergenic non-protein coding RNA 520, humanhuman

TSL 3 BASIC

Gene LINC00520, Length 778 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-204ENST00000556417 KCNH5Q8NCM2 988 aa12.78□□□□□ -0.36
LINC00520-204ENST00000556417 ROCK2O75116 1388 aaKnown RBP12.78□□□□□ -0.36
LINC00520-204ENST00000556417 PIK3C2AO00443 1686 aa12.77□□□□□ -0.36
LINC00520-204ENST00000556417 UTRNP46939 3433 aa12.77□□□□□ -0.36
LINC00520-204ENST00000556417 MARCH10Q8NA82 808 aaPredicted RBP12.77□□□□□ -0.37
LINC00520-204ENST00000556417 BCL11BQ9C0K0 894 aaPredicted RBP12.77□□□□□ -0.37
LINC00520-204ENST00000556417 CPSF1Q10570 1443 aaKnown RBP12.77□□□□□ -0.37
LINC00520-204ENST00000556417 SOX12O15370 315 aa12.76□□□□□ -0.37
LINC00520-204ENST00000556417 PROM2Q8N271 834 aa12.76□□□□□ -0.37
LINC00520-204ENST00000556417 CDCA7Q9BWT1 371 aaPredicted RBP12.76□□□□□ -0.37
LINC00520-204ENST00000556417 CARD10Q9BWT7 1032 aa12.76□□□□□ -0.37
LINC00520-204ENST00000556417 TTC21AQ8NDW8 1320 aa12.76□□□□□ -0.37
LINC00520-204ENST00000556417 TRPM1Q7Z4N2 1603 aa12.76□□□□□ -0.37
LINC00520-204ENST00000556417 NUP188Q5SRE5 1749 aa12.76□□□□□ -0.37
LINC00520-204ENST00000556417 PEAK1Q9H792 1746 aa12.76□□□□□ -0.37
LINC00520-204ENST00000556417 COL18A1P39060 1754 aa12.76□□□□□ -0.37
LINC00520-204ENST00000556417 KCNQ2O43526 872 aa12.75□□□□□ -0.37
LINC00520-204ENST00000556417 BCL9O00512 1426 aa12.74□□□□□ -0.37
LINC00520-204ENST00000556417 KTN1Q86UP2 1357 aaKnown RBP12.74□□□□□ -0.37
LINC00520-204ENST00000556417 SPON1Q9HCB6 807 aa12.74□□□□□ -0.37
LINC00520-204ENST00000556417 LRRC37A3O60309 1634 aa12.73□□□□□ -0.37
LINC00520-204ENST00000556417 EXOC5O00471 708 aa12.73□□□□□ -0.37
LINC00520-204ENST00000556417 CSB-PGBD3P0DP91 1061 aa12.73□□□□□ -0.37
LINC00520-204ENST00000556417 ANO8Q9HCE9 1232 aaPredicted RBP12.73□□□□□ -0.37
LINC00520-204ENST00000556417 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.72□□□□□ -0.37
LINC00520-204ENST00000556417 PDGFDQ9GZP0 370 aaPredicted RBP12.72□□□□□ -0.37
LINC00520-204ENST00000556417 NFAT5O94916 1531 aa12.72□□□□□ -0.37
LINC00520-204ENST00000556417 SBNO2Q9Y2G9 1366 aa12.71□□□□□ -0.37
LINC00520-204ENST00000556417 PPP1R1BQ9UD71 204 aaPredicted RBP12.71□□□□□ -0.37
LINC00520-204ENST00000556417 USP31Q70CQ4 1352 aa12.7□□□□□ -0.38
LINC00520-204ENST00000556417 NME9Q86XW9 330 aa12.7□□□□□ -0.38
LINC00520-204ENST00000556417 CARD11Q9BXL7 1154 aa12.7□□□□□ -0.38
LINC00520-204ENST00000556417 CD163L1Q9NR16 1453 aa12.7□□□□□ -0.38
LINC00520-204ENST00000556417 CCDC7Q96M83 1385 aa12.69□□□□□ -0.38
LINC00520-204ENST00000556417 TXNRD1Q16881 649 aa12.69□□□□□ -0.38
LINC00520-204ENST00000556417 SLC12A5Q9H2X9 1139 aa12.69□□□□□ -0.38
LINC00520-204ENST00000556417 AKAP12Q02952 1782 aa12.69□□□□□ -0.38
LINC00520-204ENST00000556417 ERBB3P21860 1342 aa12.68□□□□□ -0.38
LINC00520-204ENST00000556417 TMC1Q8TDI8 760 aa12.68□□□□□ -0.38
LINC00520-204ENST00000556417 RGPD3A6NKT7 1758 aaPredicted RBP12.68□□□□□ -0.38
LINC00520-204ENST00000556417 RGPD4Q7Z3J3 1758 aa12.68□□□□□ -0.38
LINC00520-204ENST00000556417 SBF2Q86WG5 1849 aa12.67□□□□□ -0.38
LINC00520-204ENST00000556417 YY1P25490 414 aa12.67□□□□□ -0.38
LINC00520-204ENST00000556417 SLC15A2Q16348 729 aa12.67□□□□□ -0.38
LINC00520-204ENST00000556417 NINLQ9Y2I6 1382 aa12.67□□□□□ -0.38
LINC00520-204ENST00000556417 ABCC6O95255 1503 aa12.67□□□□□ -0.38
LINC00520-204ENST00000556417 TNS2Q63HR2 1409 aa12.66□□□□□ -0.38
LINC00520-204ENST00000556417 ZBTB7AO95365 584 aa12.66□□□□□ -0.38
LINC00520-204ENST00000556417 PTGER2P43116 358 aa12.66□□□□□ -0.38
LINC00520-204ENST00000556417 HDGFL2Q7Z4V5 671 aaPredicted RBP12.66□□□□□ -0.38
LINC00520-204ENST00000556417 NLRP2Q9NX02 1062 aa12.66□□□□□ -0.38
LINC00520-204ENST00000556417 RGPD5Q99666 1765 aa12.66□□□□□ -0.38
LINC00520-204ENST00000556417 WNK3Q9BYP7 1800 aa12.65□□□□□ -0.38
LINC00520-204ENST00000556417 IL2RBP14784 551 aa12.65□□□□□ -0.38
LINC00520-204ENST00000556417 ANKRD24Q8TF21 1146 aa12.65□□□□□ -0.38
LINC00520-204ENST00000556417 ACSBG1Q96GR2 724 aa12.65□□□□□ -0.38
LINC00520-204ENST00000556417 PUS7Q96PZ0 661 aaKnown RBP12.65□□□□□ -0.38
LINC00520-204ENST00000556417 STK32BQ9NY57 414 aa12.65□□□□□ -0.38
LINC00520-204ENST00000556417 ATF5Q9Y2D1 282 aaPredicted RBP12.65□□□□□ -0.38
LINC00520-204ENST00000556417 GOLGB1Q14789 3259 aaKnown RBP12.64□□□□□ -0.39
LINC00520-204ENST00000556417 EDC4Q6P2E9 1401 aaKnown RBP12.64□□□□□ -0.39
LINC00520-204ENST00000556417 TERF2IPQ9NYB0 399 aa12.64□□□□□ -0.39
LINC00520-204ENST00000556417 MON2Q7Z3U7 1717 aa12.64□□□□□ -0.39
LINC00520-204ENST00000556417 A0A1W2PP64 1363 aa12.64□□□□□ -0.39
LINC00520-204ENST00000556417 CASZ1Q86V15 1759 aa12.64□□□□□ -0.39
LINC00520-204ENST00000556417 DCAF8L1A6NGE4 600 aa12.63□□□□□ -0.39
LINC00520-204ENST00000556417 IP6K1Q92551 441 aa12.62□□□□□ -0.39
LINC00520-204ENST00000556417 TESK2Q96S53 571 aa12.62□□□□□ -0.39
LINC00520-204ENST00000556417 USP54Q70EL1 1684 aa12.61□□□□□ -0.39
LINC00520-204ENST00000556417 TONSLQ96HA7 1378 aa12.61□□□□□ -0.39
LINC00520-204ENST00000556417 SGIP1Q9BQI5 828 aa12.61□□□□□ -0.39
LINC00520-204ENST00000556417 MTFR1LQ9H019 292 aa12.61□□□□□ -0.39
LINC00520-204ENST00000556417 LRRC4BQ9NT99 713 aa12.61□□□□□ -0.39
LINC00520-204ENST00000556417 ST20-MTHFSA0A0A6YYL1 179 aa12.6□□□□□ -0.39
LINC00520-204ENST00000556417 FBLN1P23142 703 aa12.6□□□□□ -0.39
LINC00520-204ENST00000556417 SYT17Q9BSW7 474 aa12.6□□□□□ -0.39
LINC00520-204ENST00000556417 FHDC1Q9C0D6 1143 aaPredicted RBP12.6□□□□□ -0.39
LINC00520-204ENST00000556417 NHSQ6T4R5 1651 aa12.59□□□□□ -0.39
LINC00520-204ENST00000556417 ZNF827Q17R98 1081 aa12.59□□□□□ -0.39
LINC00520-204ENST00000556417 DDX54Q8TDD1 881 aaKnown RBP12.58□□□□□ -0.4
LINC00520-204ENST00000556417 LTV1Q96GA3 475 aaPredicted RBP12.58□□□□□ -0.4
LINC00520-204ENST00000556417 COG3Q96JB2 828 aa12.58□□□□□ -0.4
LINC00520-204ENST00000556417 HOXC9P31274 260 aa12.57□□□□□ -0.4
LINC00520-204ENST00000556417 MYOM1P52179 1685 aa12.57□□□□□ -0.4
LINC00520-204ENST00000556417 MAP3K19Q56UN5 1328 aa12.57□□□□□ -0.4
LINC00520-204ENST00000556417 LTN1O94822 1766 aa12.56□□□□□ -0.4
LINC00520-204ENST00000556417 SLC24A1O60721 1099 aa12.56□□□□□ -0.4
LINC00520-204ENST00000556417 AKT1S1Q96B36 256 aa12.56□□□□□ -0.4
LINC00520-204ENST00000556417 PAPPAQ13219 1627 aa12.55□□□□□ -0.4
LINC00520-204ENST00000556417 PRIM1P49642 420 aaKnown RBP12.55□□□□□ -0.4
LINC00520-204ENST00000556417 SLC27A3Q5K4L6 730 aa12.55□□□□□ -0.4
LINC00520-204ENST00000556417 ARXQ96QS3 562 aa12.55□□□□□ -0.4
LINC00520-204ENST00000556417 AMPHP49418 695 aa12.54□□□□□ -0.4
LINC00520-204ENST00000556417 ZCRB1Q8TBF4 217 aaKnown RBP12.54□□□□□ -0.4
LINC00520-204ENST00000556417 FYB1O15117 783 aa12.53□□□□□ -0.4
LINC00520-204ENST00000556417 KCNQ4P56696 695 aa12.53□□□□□ -0.4
LINC00520-204ENST00000556417 RRS1Q15050 365 aaKnown RBP12.53□□□□□ -0.4
LINC00520-204ENST00000556417 NBPF6Q5VWK0 638 aa12.53□□□□□ -0.4
LINC00520-204ENST00000556417 SYTL4Q96C24 671 aaPredicted RBP12.53□□□□□ -0.4
LINC00520-204ENST00000556417 NBPF4Q96M43 638 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms