RNA–Protein interactions for RNA: ENST00000556284.1

MTHFD1-213, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-213ENST00000556284 GCP02774 474 aa13.58□□□□□ -0.24
MTHFD1-213ENST00000556284 TNNT2P45379 298 aaPredicted RBP13.58□□□□□ -0.24
MTHFD1-213ENST00000556284 FBXO41Q8TF61 875 aa13.58□□□□□ -0.24
MTHFD1-213ENST00000556284 ALS2Q96Q42 1657 aa13.58□□□□□ -0.24
MTHFD1-213ENST00000556284 MYBBP1AQ9BQG0 1328 aaKnown RBP13.58□□□□□ -0.24
MTHFD1-213ENST00000556284 KIF20BQ96Q89 1820 aa13.57□□□□□ -0.24
MTHFD1-213ENST00000556284 PHLPP1O60346 1717 aa13.57□□□□□ -0.24
MTHFD1-213ENST00000556284 PPP2R1AP30153 589 aa13.57□□□□□ -0.24
MTHFD1-213ENST00000556284 HSPA1LP34931 641 aa13.57□□□□□ -0.24
MTHFD1-213ENST00000556284 PNPLA6Q8IY17 1366 aa13.57□□□□□ -0.24
MTHFD1-213ENST00000556284 COL16A1Q07092 1604 aaPredicted RBP13.56□□□□□ -0.24
MTHFD1-213ENST00000556284 USP54Q70EL1 1684 aa13.56□□□□□ -0.24
MTHFD1-213ENST00000556284 JCADQ9P266 1359 aa13.56□□□□□ -0.24
MTHFD1-213ENST00000556284 SLIT3O75094 1523 aa13.54□□□□□ -0.24
MTHFD1-213ENST00000556284 MED1Q15648 1581 aaPredicted RBP13.54□□□□□ -0.24
MTHFD1-213ENST00000556284 ANKRD26Q9UPS8 1709 aa13.54□□□□□ -0.24
MTHFD1-213ENST00000556284 FXR2P51116 673 aaKnown RBP eCLIP13.54□□□□□ -0.24
MTHFD1-213ENST00000556284 HAP1P54257 671 aaPredicted RBP13.54□□□□□ -0.24
MTHFD1-213ENST00000556284 CABLES1Q8TDN4 633 aa13.54□□□□□ -0.24
MTHFD1-213ENST00000556284 POLKQ9UBT6 870 aa13.54□□□□□ -0.24
MTHFD1-213ENST00000556284 CCER2I3L3R5 266 aa13.53□□□□□ -0.24
MTHFD1-213ENST00000556284 SOX12O15370 315 aa13.53□□□□□ -0.24
MTHFD1-213ENST00000556284 FBLN1P23142 703 aa13.53□□□□□ -0.24
MTHFD1-213ENST00000556284 MTHFSP49914 203 aa13.53□□□□□ -0.24
MTHFD1-213ENST00000556284 MNX1P50219 401 aaPredicted RBP13.53□□□□□ -0.24
MTHFD1-213ENST00000556284 ARHGEF25Q86VW2 580 aa13.53□□□□□ -0.24
MTHFD1-213ENST00000556284 RRS1Q15050 365 aaKnown RBP13.52□□□□□ -0.25
MTHFD1-213ENST00000556284 CHADLQ6NUI6 762 aa13.52□□□□□ -0.25
MTHFD1-213ENST00000556284 KIF24Q5T7B8 1368 aa13.52□□□□□ -0.25
MTHFD1-213ENST00000556284 NFAT5O94916 1531 aa13.51□□□□□ -0.25
MTHFD1-213ENST00000556284 CPDO75976 1380 aa13.51□□□□□ -0.25
MTHFD1-213ENST00000556284 MAP3K19Q56UN5 1328 aa13.51□□□□□ -0.25
MTHFD1-213ENST00000556284 SPATA31A6Q5VVP1 1343 aa13.51□□□□□ -0.25
MTHFD1-213ENST00000556284 AMPHP49418 695 aa13.51□□□□□ -0.25
MTHFD1-213ENST00000556284 ZC3H6P61129 1189 aaKnown RBP13.51□□□□□ -0.25
MTHFD1-213ENST00000556284 CFAP53Q96M91 514 aa13.51□□□□□ -0.25
MTHFD1-213ENST00000556284 EMILIN1Q9Y6C2 1016 aa13.51□□□□□ -0.25
MTHFD1-213ENST00000556284 MARF1Q9Y4F3 1742 aaKnown RBP13.5□□□□□ -0.25
MTHFD1-213ENST00000556284 COL22A1Q8NFW1 1626 aaPredicted RBP13.5□□□□□ -0.25
MTHFD1-213ENST00000556284 SMG6Q86US8 1419 aaKnown RBP13.5□□□□□ -0.25
MTHFD1-213ENST00000556284 INSRP06213 1382 aa13.5□□□□□ -0.25
MTHFD1-213ENST00000556284 PPM1GO15355 546 aaPredicted RBP13.5□□□□□ -0.25
MTHFD1-213ENST00000556284 PRKAR2AP13861 404 aaKnown RBP13.5□□□□□ -0.25
MTHFD1-213ENST00000556284 IP6K1Q92551 441 aa13.5□□□□□ -0.25
MTHFD1-213ENST00000556284 RTL1A6NKG5 1358 aa13.48□□□□□ -0.25
MTHFD1-213ENST00000556284 FLT4P35916 1363 aa13.48□□□□□ -0.25
MTHFD1-213ENST00000556284 KIAA0232Q92628 1395 aa13.48□□□□□ -0.25
MTHFD1-213ENST00000556284 HOXC9P31274 260 aa13.48□□□□□ -0.25
MTHFD1-213ENST00000556284 PIP4P2Q8N4L2 257 aa13.48□□□□□ -0.25
MTHFD1-213ENST00000556284 PRDM11Q9NQV5 511 aa13.48□□□□□ -0.25
MTHFD1-213ENST00000556284 SHPRHQ149N8 1683 aa13.47□□□□□ -0.25
MTHFD1-213ENST00000556284 NUTM2BA6NNL0 878 aaPredicted RBP13.47□□□□□ -0.25
MTHFD1-213ENST00000556284 NUTM2EB1AL46 878 aaPredicted RBP13.47□□□□□ -0.25
MTHFD1-213ENST00000556284 NUTM2AQ8IVF1 878 aaPredicted RBP13.47□□□□□ -0.25
MTHFD1-213ENST00000556284 MRS2Q9HD23 443 aa13.47□□□□□ -0.25
MTHFD1-213ENST00000556284 CDK12Q9NYV4 1490 aaPredicted RBP13.47□□□□□ -0.25
MTHFD1-213ENST00000556284 ZBTB7CA1YPR0 619 aa13.46□□□□□ -0.25
MTHFD1-213ENST00000556284 FAM83GA6ND36 823 aa13.46□□□□□ -0.25
MTHFD1-213ENST00000556284 HSP90AB2PQ58FF8 381 aa13.46□□□□□ -0.25
MTHFD1-213ENST00000556284 CRYBG1Q9Y4K1 1723 aa13.46□□□□□ -0.25
MTHFD1-213ENST00000556284 PHRF1Q9P1Y6 1649 aaKnown RBP13.46□□□□□ -0.26
MTHFD1-213ENST00000556284 DIAPH1O60610 1272 aaKnown RBP13.45□□□□□ -0.26
MTHFD1-213ENST00000556284 ADAMTS2O95450 1211 aa13.45□□□□□ -0.26
MTHFD1-213ENST00000556284 CHRNA2Q15822 529 aa13.45□□□□□ -0.26
MTHFD1-213ENST00000556284 CCDC184Q52MB2 194 aa13.45□□□□□ -0.26
MTHFD1-213ENST00000556284 ABCC6O95255 1503 aa13.44□□□□□ -0.26
MTHFD1-213ENST00000556284 MAP2P11137 1827 aaKnown RBP13.44□□□□□ -0.26
MTHFD1-213ENST00000556284 NUBP1P53384 320 aa13.44□□□□□ -0.26
MTHFD1-213ENST00000556284 NUDCQ9Y266 331 aa13.44□□□□□ -0.26
MTHFD1-213ENST00000556284 AXIN2Q9Y2T1 843 aa13.44□□□□□ -0.26
MTHFD1-213ENST00000556284 FARP1Q9Y4F1 1045 aaPredicted RBP13.44□□□□□ -0.26
MTHFD1-213ENST00000556284 BLMP54132 1417 aaPredicted RBP13.44□□□□□ -0.26
MTHFD1-213ENST00000556284 IL13P35225 146 aa13.43□□□□□ -0.26
MTHFD1-213ENST00000556284 EIF4A2Q14240 407 aaKnown RBP13.43□□□□□ -0.26
MTHFD1-213ENST00000556284 PNISRQ8TF01 805 aaKnown RBP13.43□□□□□ -0.26
MTHFD1-213ENST00000556284 ABCA3Q99758 1704 aa13.42□□□□□ -0.26
MTHFD1-213ENST00000556284 CIZ1Q9ULV3 898 aaPredicted RBP13.42□□□□□ -0.26
MTHFD1-213ENST00000556284 COL3A1P02461 1466 aaPredicted RBP13.42□□□□□ -0.26
MTHFD1-213ENST00000556284 ANKRD24Q8TF21 1146 aa13.41□□□□□ -0.26
MTHFD1-213ENST00000556284 PEAK1Q9H792 1746 aa13.41□□□□□ -0.26
MTHFD1-213ENST00000556284 EVA1CP58658 441 aa13.4□□□□□ -0.26
MTHFD1-213ENST00000556284 WDR43Q15061 677 aaKnown RBP eCLIP13.4□□□□□ -0.26
MTHFD1-213ENST00000556284 MEX3CQ5U5Q3 659 aaKnown RBP13.4□□□□□ -0.26
MTHFD1-213ENST00000556284 LTV1Q96GA3 475 aaPredicted RBP13.4□□□□□ -0.26
MTHFD1-213ENST00000556284 NGLY1Q96IV0 654 aa13.4□□□□□ -0.26
MTHFD1-213ENST00000556284 BTG4Q9NY30 223 aa13.4□□□□□ -0.26
MTHFD1-213ENST00000556284 LTN1O94822 1766 aa13.4□□□□□ -0.26
MTHFD1-213ENST00000556284 ERBB3P21860 1342 aa13.39□□□□□ -0.27
MTHFD1-213ENST00000556284 U2SURPO15042 1029 aaKnown RBP13.39□□□□□ -0.27
MTHFD1-213ENST00000556284 FNBP4Q8N3X1 1017 aaPredicted RBP13.39□□□□□ -0.27
MTHFD1-213ENST00000556284 C8orf37Q96NL8 207 aa13.39□□□□□ -0.27
MTHFD1-213ENST00000556284 COL18A1P39060 1754 aa13.39□□□□□ -0.27
MTHFD1-213ENST00000556284 LRP6O75581 1613 aa13.39□□□□□ -0.27
MTHFD1-213ENST00000556284 COL14A1Q05707 1796 aaKnown RBP13.38□□□□□ -0.27
MTHFD1-213ENST00000556284 CAMTA1Q9Y6Y1 1673 aa13.38□□□□□ -0.27
MTHFD1-213ENST00000556284 U2AF1L5P0DN76 240 aaPredicted RBP13.38□□□□□ -0.27
MTHFD1-213ENST00000556284 CSB-PGBD3P0DP91 1061 aa13.38□□□□□ -0.27
MTHFD1-213ENST00000556284 U2AF1Q01081 240 aaKnown RBP eCLIP13.38□□□□□ -0.27
MTHFD1-213ENST00000556284 GSE1Q14687 1217 aa13.38□□□□□ -0.27
MTHFD1-213ENST00000556284 WDR17Q8IZU2 1322 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 165 ms