RNA–Protein interactions for RNA: ENST00000556264.1

SPTLC2-204, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-204ENST00000556264 LZTS3O60299 673 aaPredicted RBP6.88□□□□□ -1.31
SPTLC2-204ENST00000556264 ZBTB33Q86T24 672 aa6.88□□□□□ -1.31
SPTLC2-204ENST00000556264 ADAM32Q8TC27 787 aa6.88□□□□□ -1.31
SPTLC2-204ENST00000556264 CCER1Q8TC90 406 aaPredicted RBP6.88□□□□□ -1.31
SPTLC2-204ENST00000556264 CDCA7Q9BWT1 371 aaPredicted RBP6.88□□□□□ -1.31
SPTLC2-204ENST00000556264 TSGA10IPQ3SY00 556 aa6.87□□□□□ -1.31
SPTLC2-204ENST00000556264 TXNDC2Q86VQ3 553 aa6.87□□□□□ -1.31
SPTLC2-204ENST00000556264 CCDC24Q8N4L8 307 aa6.87□□□□□ -1.31
SPTLC2-204ENST00000556264 SLAIN2Q9P270 581 aa6.87□□□□□ -1.31
SPTLC2-204ENST00000556264 SSFA2P28290 1259 aa6.86□□□□□ -1.31
SPTLC2-204ENST00000556264 ARID4AP29374 1257 aaPredicted RBP6.86□□□□□ -1.31
SPTLC2-204ENST00000556264 FAM69CQ0P6D2 419 aa6.86□□□□□ -1.31
SPTLC2-204ENST00000556264 EML3Q32P44 896 aa6.86□□□□□ -1.31
SPTLC2-204ENST00000556264 MAP7D1Q3KQU3 841 aa6.86□□□□□ -1.31
SPTLC2-204ENST00000556264 PTCRAQ6ISU1 281 aaPredicted RBP6.86□□□□□ -1.31
SPTLC2-204ENST00000556264 ANKMY2Q8IV38 441 aa6.86□□□□□ -1.31
SPTLC2-204ENST00000556264 UNC93B1Q9H1C4 597 aa6.86□□□□□ -1.31
SPTLC2-204ENST00000556264 CHIC2Q9UKJ5 165 aa6.86□□□□□ -1.31
SPTLC2-204ENST00000556264 TLL1O43897 1013 aa6.85□□□□□ -1.31
SPTLC2-204ENST00000556264 DZIP3Q86Y13 1208 aaKnown RBP6.85□□□□□ -1.31
SPTLC2-204ENST00000556264 OGFOD1Q8N543 542 aa6.85□□□□□ -1.31
SPTLC2-204ENST00000556264 CLP1Q92989 425 aaKnown RBP6.85□□□□□ -1.31
SPTLC2-204ENST00000556264 ZPR1O75312 459 aa6.84□□□□□ -1.31
SPTLC2-204ENST00000556264 ADH1BP00325 375 aa6.84□□□□□ -1.31
SPTLC2-204ENST00000556264 DPYDQ12882 1025 aa6.84□□□□□ -1.31
SPTLC2-204ENST00000556264 TRAF7Q6Q0C0 670 aa6.84□□□□□ -1.31
SPTLC2-204ENST00000556264 SH3BP5LQ7L8J4 393 aa6.84□□□□□ -1.31
SPTLC2-204ENST00000556264 ZNF594Q96JF6 807 aaPredicted RBP6.84□□□□□ -1.31
SPTLC2-204ENST00000556264 CARD14Q9BXL6 1004 aa6.84□□□□□ -1.31
SPTLC2-204ENST00000556264 NOD1Q9Y239 953 aa6.84□□□□□ -1.31
SPTLC2-204ENST00000556264 MAGEB6P1A0A0J9YX57 407 aa6.83□□□□□ -1.32
SPTLC2-204ENST00000556264 E9PSI1 815 aa6.83□□□□□ -1.32
SPTLC2-204ENST00000556264 ATP2B4P23634 1241 aa6.83□□□□□ -1.32
SPTLC2-204ENST00000556264 CLDN10P78369 228 aa6.83□□□□□ -1.32
SPTLC2-204ENST00000556264 TRIM50Q86XT4 487 aa6.83□□□□□ -1.32
SPTLC2-204ENST00000556264 CCDC85AQ96PX6 553 aaPredicted RBP6.83□□□□□ -1.32
SPTLC2-204ENST00000556264 DNAAF2Q9NVR5 837 aaKnown RBP6.83□□□□□ -1.32
SPTLC2-204ENST00000556264 DOLKQ9UPQ8 538 aa6.83□□□□□ -1.32
SPTLC2-204ENST00000556264 AMOTL2Q9Y2J4 779 aa6.83□□□□□ -1.32
SPTLC2-204ENST00000556264 GIGYF1O75420 1035 aaPredicted RBP6.82□□□□□ -1.32
SPTLC2-204ENST00000556264 ATP1A2P50993 1020 aa6.82□□□□□ -1.32
SPTLC2-204ENST00000556264 OXLD1Q5BKU9 147 aa6.82□□□□□ -1.32
SPTLC2-204ENST00000556264 THSD4Q6ZMP0 1018 aa6.82□□□□□ -1.32
SPTLC2-204ENST00000556264 BAP1Q92560 729 aa6.82□□□□□ -1.32
SPTLC2-204ENST00000556264 ZBTB7BO15156 539 aaPredicted RBP6.81□□□□□ -1.32
SPTLC2-204ENST00000556264 AGERQ15109 404 aa6.81□□□□□ -1.32
SPTLC2-204ENST00000556264 LARGE2Q8N3Y3 721 aa6.81□□□□□ -1.32
SPTLC2-204ENST00000556264 MTRQ99707 1265 aa6.81□□□□□ -1.32
SPTLC2-204ENST00000556264 SCNN1AP37088 669 aa6.8□□□□□ -1.32
SPTLC2-204ENST00000556264 SWI5Q1ZZU3 235 aa6.8□□□□□ -1.32
SPTLC2-204ENST00000556264 SH3RF1Q7Z6J0 888 aa6.8□□□□□ -1.32
SPTLC2-204ENST00000556264 FOXJ1Q92949 421 aa6.8□□□□□ -1.32
SPTLC2-204ENST00000556264 KCTD12Q96CX2 325 aaKnown RBP6.8□□□□□ -1.32
SPTLC2-204ENST00000556264 SLC6A16Q9GZN6 736 aa6.8□□□□□ -1.32
SPTLC2-204ENST00000556264 MYT1LQ9UL68 1186 aa6.8□□□□□ -1.32
SPTLC2-204ENST00000556264 SOWAHDA6NJG2 315 aa6.79□□□□□ -1.32
SPTLC2-204ENST00000556264 SERPINB4P48594 390 aa6.79□□□□□ -1.32
SPTLC2-204ENST00000556264 GTF2IP78347 998 aa6.79□□□□□ -1.32
SPTLC2-204ENST00000556264 LINC01559Q495D7 138 aa6.79□□□□□ -1.32
SPTLC2-204ENST00000556264 ERFEQ4G0M1 354 aa6.79□□□□□ -1.32
SPTLC2-204ENST00000556264 LCE2DQ5TA82 110 aaPredicted RBP6.79□□□□□ -1.32
SPTLC2-204ENST00000556264 BPHLQ86WA6 291 aaPredicted RBP6.79□□□□□ -1.32
SPTLC2-204ENST00000556264 ZNF516Q92618 1163 aa6.79□□□□□ -1.32
SPTLC2-204ENST00000556264 KIAA1024Q9UPX6 916 aa6.79□□□□□ -1.32
SPTLC2-204ENST00000556264 RBM19Q9Y4C8 960 aaKnown RBP6.79□□□□□ -1.32
SPTLC2-204ENST00000556264 PRMT3O60678 531 aa6.78□□□□□ -1.32
SPTLC2-204ENST00000556264 DKK1O94907 266 aa6.78□□□□□ -1.32
SPTLC2-204ENST00000556264 SEC13P55735 322 aa6.78□□□□□ -1.32
SPTLC2-204ENST00000556264 RNF20Q5VTR2 975 aa6.78□□□□□ -1.32
SPTLC2-204ENST00000556264 CCDC102BQ68D86 513 aa6.78□□□□□ -1.32
SPTLC2-204ENST00000556264 NYAP1Q6ZVC0 841 aa6.78□□□□□ -1.32
SPTLC2-204ENST00000556264 SIX5Q8N196 739 aa6.78□□□□□ -1.32
SPTLC2-204ENST00000556264 SFI1A8K8P3 1242 aa6.77□□□□□ -1.33
SPTLC2-204ENST00000556264 C4orf48Q5BLP8 95 aa6.77□□□□□ -1.33
SPTLC2-204ENST00000556264 ZNF511Q8NB15 262 aa6.77□□□□□ -1.33
SPTLC2-204ENST00000556264 PRIMPOLQ96LW4 560 aa6.77□□□□□ -1.33
SPTLC2-204ENST00000556264 PSME1Q06323 249 aa6.76□□□□□ -1.33
SPTLC2-204ENST00000556264 TJAP1Q5JTD0 557 aa6.76□□□□□ -1.33
SPTLC2-204ENST00000556264 TPCN2Q8NHX9 752 aa6.76□□□□□ -1.33
SPTLC2-204ENST00000556264 C1orf216Q8TAB5 229 aa6.76□□□□□ -1.33
SPTLC2-204ENST00000556264 SLC10A4Q96EP9 437 aa6.76□□□□□ -1.33
SPTLC2-204ENST00000556264 IL21Q9HBE4 155 aa6.76□□□□□ -1.33
SPTLC2-204ENST00000556264 PCDHB11Q9Y5F2 797 aa6.76□□□□□ -1.33
SPTLC2-204ENST00000556264 PCDHGA11Q9Y5H2 935 aa6.76□□□□□ -1.33
SPTLC2-204ENST00000556264 LGR5O75473 907 aa6.75□□□□□ -1.33
SPTLC2-204ENST00000556264 S1PR4O95977 384 aa6.75□□□□□ -1.33
SPTLC2-204ENST00000556264 PTPN5P54829 565 aa6.75□□□□□ -1.33
SPTLC2-204ENST00000556264 USP4Q13107 963 aa6.75□□□□□ -1.33
SPTLC2-204ENST00000556264 DNAJC14Q6Y2X3 702 aaPredicted RBP6.75□□□□□ -1.33
SPTLC2-204ENST00000556264 NKX2-3Q8TAU0 364 aa6.75□□□□□ -1.33
SPTLC2-204ENST00000556264 SIRT1Q96EB6 747 aa6.75□□□□□ -1.33
SPTLC2-204ENST00000556264 HINFPQ9BQA5 517 aa6.75□□□□□ -1.33
SPTLC2-204ENST00000556264 BIN2Q9UBW5 565 aaPredicted RBP6.75□□□□□ -1.33
SPTLC2-204ENST00000556264 FCF1Q9Y324 198 aaKnown RBP6.75□□□□□ -1.33
SPTLC2-204ENST00000556264 UNCXA6NJT0 531 aa6.74□□□□□ -1.33
SPTLC2-204ENST00000556264 ESPNB1AK53 854 aa6.74□□□□□ -1.33
SPTLC2-204ENST00000556264 ABL1P00519 1130 aa6.74□□□□□ -1.33
SPTLC2-204ENST00000556264 MARSP56192 900 aaKnown RBP6.74□□□□□ -1.33
SPTLC2-204ENST00000556264 OCLNQ16625 522 aa6.74□□□□□ -1.33
SPTLC2-204ENST00000556264 NBPF20Q3BBV1 942 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms