RNA–Protein interactions for RNA: ENST00000556116.1

LINC00639-203, long intergenic non-protein coding RNA 639, humanhuman

TSL 4

Gene LINC00639, Length 552 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00639-203ENST00000556116 CARD11Q9BXL7 1154 aa12.4□□□□□ -0.42
LINC00639-203ENST00000556116 KTN1Q86UP2 1357 aaKnown RBP12.4□□□□□ -0.42
LINC00639-203ENST00000556116 FAM196AQ6ZSG2 479 aa12.39□□□□□ -0.43
LINC00639-203ENST00000556116 NME9Q86XW9 330 aa12.39□□□□□ -0.43
LINC00639-203ENST00000556116 SLC12A5Q9H2X9 1139 aa12.39□□□□□ -0.43
LINC00639-203ENST00000556116 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.38□□□□□ -0.43
LINC00639-203ENST00000556116 WDR17Q8IZU2 1322 aa12.37□□□□□ -0.43
LINC00639-203ENST00000556116 APBA3O96018 575 aa12.37□□□□□ -0.43
LINC00639-203ENST00000556116 PDE3BQ13370 1112 aa12.37□□□□□ -0.43
LINC00639-203ENST00000556116 TESK2Q96S53 571 aa12.37□□□□□ -0.43
LINC00639-203ENST00000556116 A0A1W2PP64 1363 aa12.37□□□□□ -0.43
LINC00639-203ENST00000556116 TONSLQ96HA7 1378 aa12.37□□□□□ -0.43
LINC00639-203ENST00000556116 TTC21AQ8NDW8 1320 aa12.37□□□□□ -0.43
LINC00639-203ENST00000556116 USP31Q70CQ4 1352 aa12.36□□□□□ -0.43
LINC00639-203ENST00000556116 TOM1L2Q6ZVM7 507 aa12.36□□□□□ -0.43
LINC00639-203ENST00000556116 ZNF692Q9BU19 519 aaPredicted RBP12.36□□□□□ -0.43
LINC00639-203ENST00000556116 THRAP3Q9Y2W1 955 aaKnown RBP12.36□□□□□ -0.43
LINC00639-203ENST00000556116 FBLN1P23142 703 aa12.35□□□□□ -0.43
LINC00639-203ENST00000556116 MARCH10Q8NA82 808 aaPredicted RBP12.35□□□□□ -0.43
LINC00639-203ENST00000556116 RGPD2P0DJD1 1756 aa12.35□□□□□ -0.43
LINC00639-203ENST00000556116 OVOS2A0A0J9YW53 1432 aa12.35□□□□□ -0.43
LINC00639-203ENST00000556116 OVOS2Q6IE36 1432 aa12.35□□□□□ -0.43
LINC00639-203ENST00000556116 ST20-MTHFSA0A0A6YYL1 179 aa12.34□□□□□ -0.43
LINC00639-203ENST00000556116 TMC1Q8TDI8 760 aa12.34□□□□□ -0.43
LINC00639-203ENST00000556116 OVOS2A0A0G2JMS6 1433 aa12.34□□□□□ -0.43
LINC00639-203ENST00000556116 RGPD3A6NKT7 1758 aaPredicted RBP12.33□□□□□ -0.44
LINC00639-203ENST00000556116 RGPD4Q7Z3J3 1758 aa12.33□□□□□ -0.44
LINC00639-203ENST00000556116 ABCC6O95255 1503 aa12.32□□□□□ -0.44
LINC00639-203ENST00000556116 EDC4Q6P2E9 1401 aaKnown RBP12.32□□□□□ -0.44
LINC00639-203ENST00000556116 DDB1Q16531 1140 aa12.32□□□□□ -0.44
LINC00639-203ENST00000556116 PROM2Q8N271 834 aa12.32□□□□□ -0.44
LINC00639-203ENST00000556116 KCNH5Q8NCM2 988 aa12.32□□□□□ -0.44
LINC00639-203ENST00000556116 ANO8Q9HCE9 1232 aaPredicted RBP12.32□□□□□ -0.44
LINC00639-203ENST00000556116 TRIM26Q12899 539 aaPredicted RBP12.31□□□□□ -0.44
LINC00639-203ENST00000556116 CARD10Q9BWT7 1032 aa12.31□□□□□ -0.44
LINC00639-203ENST00000556116 PDGFDQ9GZP0 370 aaPredicted RBP12.31□□□□□ -0.44
LINC00639-203ENST00000556116 ERBB3P21860 1342 aa12.31□□□□□ -0.44
LINC00639-203ENST00000556116 PARD3Q8TEW0 1356 aa12.3□□□□□ -0.44
LINC00639-203ENST00000556116 CASZ1Q86V15 1759 aa12.3□□□□□ -0.44
LINC00639-203ENST00000556116 MYOM1P52179 1685 aa12.3□□□□□ -0.44
LINC00639-203ENST00000556116 KCNQ2O43526 872 aa12.3□□□□□ -0.44
LINC00639-203ENST00000556116 CSB-PGBD3P0DP91 1061 aa12.3□□□□□ -0.44
LINC00639-203ENST00000556116 SHANK3Q9BYB0 1731 aa12.3□□□□□ -0.44
LINC00639-203ENST00000556116 TNS2Q63HR2 1409 aa12.29□□□□□ -0.44
LINC00639-203ENST00000556116 NHSQ6T4R5 1651 aa12.29□□□□□ -0.44
LINC00639-203ENST00000556116 FAM208AQ9UK61 1670 aaKnown RBP12.29□□□□□ -0.44
LINC00639-203ENST00000556116 BCL9O00512 1426 aa12.28□□□□□ -0.44
LINC00639-203ENST00000556116 HDGFL2Q7Z4V5 671 aaPredicted RBP12.27□□□□□ -0.45
LINC00639-203ENST00000556116 ANKRD24Q8TF21 1146 aa12.27□□□□□ -0.45
LINC00639-203ENST00000556116 BCL11BQ9C0K0 894 aaPredicted RBP12.27□□□□□ -0.45
LINC00639-203ENST00000556116 BTAF1O14981 1849 aa12.27□□□□□ -0.45
LINC00639-203ENST00000556116 USP47Q96K76 1375 aa12.27□□□□□ -0.45
LINC00639-203ENST00000556116 CCDC7Q96M83 1385 aa12.27□□□□□ -0.45
LINC00639-203ENST00000556116 PLSCR1O15162 318 aa12.26□□□□□ -0.45
LINC00639-203ENST00000556116 ACSBG1Q96GR2 724 aa12.26□□□□□ -0.45
LINC00639-203ENST00000556116 NLRP2Q9NX02 1062 aa12.26□□□□□ -0.45
LINC00639-203ENST00000556116 PAPPAQ13219 1627 aa12.26□□□□□ -0.45
LINC00639-203ENST00000556116 PUS7Q96PZ0 661 aaKnown RBP12.25□□□□□ -0.45
LINC00639-203ENST00000556116 UTRNP46939 3433 aa12.25□□□□□ -0.45
LINC00639-203ENST00000556116 KIF20BQ96Q89 1820 aa12.25□□□□□ -0.45
LINC00639-203ENST00000556116 MAP3K19Q56UN5 1328 aa12.24□□□□□ -0.45
LINC00639-203ENST00000556116 ANKRD36BQ8N2N9 1353 aa12.24□□□□□ -0.45
LINC00639-203ENST00000556116 LTV1Q96GA3 475 aaPredicted RBP12.24□□□□□ -0.45
LINC00639-203ENST00000556116 CDCA7Q9BWT1 371 aaPredicted RBP12.24□□□□□ -0.45
LINC00639-203ENST00000556116 TERF2IPQ9NYB0 399 aa12.24□□□□□ -0.45
LINC00639-203ENST00000556116 MEGF6O75095 1541 aa12.23□□□□□ -0.45
LINC00639-203ENST00000556116 EXOC5O00471 708 aa12.23□□□□□ -0.45
LINC00639-203ENST00000556116 RRS1Q15050 365 aaKnown RBP12.23□□□□□ -0.45
LINC00639-203ENST00000556116 IP6K1Q92551 441 aa12.23□□□□□ -0.45
LINC00639-203ENST00000556116 KAT6BQ8WYB5 2073 aa12.23□□□□□ -0.45
LINC00639-203ENST00000556116 DOT1LQ8TEK3 1739 aa12.23□□□□□ -0.45
LINC00639-203ENST00000556116 FYB1O15117 783 aa12.22□□□□□ -0.45
LINC00639-203ENST00000556116 IL2RBP14784 551 aa12.22□□□□□ -0.45
LINC00639-203ENST00000556116 HOXC9P31274 260 aa12.22□□□□□ -0.45
LINC00639-203ENST00000556116 TXNRD1Q16881 649 aa12.22□□□□□ -0.45
LINC00639-203ENST00000556116 GGNBP2Q9H3C7 697 aa12.22□□□□□ -0.45
LINC00639-203ENST00000556116 NINLQ9Y2I6 1382 aa12.21□□□□□ -0.45
LINC00639-203ENST00000556116 TUBGCP6Q96RT7 1819 aa12.21□□□□□ -0.45
LINC00639-203ENST00000556116 CARD14Q9BXL6 1004 aa12.21□□□□□ -0.45
LINC00639-203ENST00000556116 NBPF14Q5TI25 921 aa12.2□□□□□ -0.46
LINC00639-203ENST00000556116 COG3Q96JB2 828 aa12.2□□□□□ -0.46
LINC00639-203ENST00000556116 USHBP1Q8N6Y0 703 aa12.19□□□□□ -0.46
LINC00639-203ENST00000556116 LRRC4BQ9NT99 713 aa12.19□□□□□ -0.46
LINC00639-203ENST00000556116 NSD2O96028 1365 aa12.18□□□□□ -0.46
LINC00639-203ENST00000556116 C11orf95C9JLR9 678 aaPredicted RBP12.18□□□□□ -0.46
LINC00639-203ENST00000556116 ZBTB7AO95365 584 aa12.18□□□□□ -0.46
LINC00639-203ENST00000556116 PTGER2P43116 358 aa12.18□□□□□ -0.46
LINC00639-203ENST00000556116 KCNQ4P56696 695 aa12.18□□□□□ -0.46
LINC00639-203ENST00000556116 TMF1P82094 1093 aa12.18□□□□□ -0.46
LINC00639-203ENST00000556116 ZNF827Q17R98 1081 aa12.18□□□□□ -0.46
LINC00639-203ENST00000556116 NBPF6Q5VWK0 638 aa12.18□□□□□ -0.46
LINC00639-203ENST00000556116 NBPF4Q96M43 638 aa12.18□□□□□ -0.46
LINC00639-203ENST00000556116 LY75O60449 1722 aa12.17□□□□□ -0.46
LINC00639-203ENST00000556116 ANKRD26Q9UPS8 1709 aa12.17□□□□□ -0.46
LINC00639-203ENST00000556116 TOGARAM1Q9Y4F4 1720 aa12.17□□□□□ -0.46
LINC00639-203ENST00000556116 DDX54Q8TDD1 881 aaKnown RBP12.17□□□□□ -0.46
LINC00639-203ENST00000556116 PCGF6Q9BYE7 350 aa12.17□□□□□ -0.46
LINC00639-203ENST00000556116 AMPHP49418 695 aa12.16□□□□□ -0.46
LINC00639-203ENST00000556116 SLC15A2Q16348 729 aa12.16□□□□□ -0.46
LINC00639-203ENST00000556116 HSP90AB2PQ58FF8 381 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms