RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 THRAP3Q9Y2W1 955 aaKnown RBP15.61■□□□□ 0.09
CHGA-205ENST00000556098 CCDC61Q9Y6R9 512 aa15.61■□□□□ 0.09
CHGA-205ENST00000556098 COL18A1P39060 1754 aa15.61■□□□□ 0.09
CHGA-205ENST00000556098 GCP02774 474 aa15.6■□□□□ 0.09
CHGA-205ENST00000556098 DDB1Q16531 1140 aa15.6■□□□□ 0.09
CHGA-205ENST00000556098 ANO8Q9HCE9 1232 aaPredicted RBP15.6■□□□□ 0.09
CHGA-205ENST00000556098 ATF5Q9Y2D1 282 aaPredicted RBP15.6■□□□□ 0.09
CHGA-205ENST00000556098 CPDO75976 1380 aa15.6■□□□□ 0.09
CHGA-205ENST00000556098 PDGFDQ9GZP0 370 aaPredicted RBP15.59■□□□□ 0.09
CHGA-205ENST00000556098 CABP2Q9NPB3 220 aa15.59■□□□□ 0.09
CHGA-205ENST00000556098 USP19O94966 1318 aa15.59■□□□□ 0.09
CHGA-205ENST00000556098 NLRP6P59044 892 aa15.58■□□□□ 0.08
CHGA-205ENST00000556098 PTF1AQ7RTS3 328 aa15.58■□□□□ 0.08
CHGA-205ENST00000556098 LTN1O94822 1766 aa15.57■□□□□ 0.08
CHGA-205ENST00000556098 CSB-PGBD3P0DP91 1061 aa15.57■□□□□ 0.08
CHGA-205ENST00000556098 PLEKHG3A1L390 1219 aa15.56■□□□□ 0.08
CHGA-205ENST00000556098 BTAF1O14981 1849 aa15.56■□□□□ 0.08
CHGA-205ENST00000556098 NHSQ6T4R5 1651 aa15.55■□□□□ 0.08
CHGA-205ENST00000556098 SLIT3O75094 1523 aa15.55■□□□□ 0.08
CHGA-205ENST00000556098 STK32BQ9NY57 414 aa15.55■□□□□ 0.08
CHGA-205ENST00000556098 C11orf95C9JLR9 678 aaPredicted RBP15.54■□□□□ 0.08
CHGA-205ENST00000556098 CENPJQ9HC77 1338 aaPredicted RBP15.53■□□□□ 0.08
CHGA-205ENST00000556098 SENP3-EIF4A1A0A087X0R7 540 aa15.53■□□□□ 0.08
CHGA-205ENST00000556098 PLSCR1O15162 318 aa15.53■□□□□ 0.08
CHGA-205ENST00000556098 NBPF1Q3BBV0 1214 aa15.53■□□□□ 0.08
CHGA-205ENST00000556098 KLHL34Q8N239 644 aa15.53■□□□□ 0.08
CHGA-205ENST00000556098 USP6P35125 1406 aa15.52■□□□□ 0.08
CHGA-205ENST00000556098 MARCH10Q8NA82 808 aaPredicted RBP15.52■□□□□ 0.08
CHGA-205ENST00000556098 STAC3Q96MF2 364 aa15.52■□□□□ 0.08
CHGA-205ENST00000556098 CABP1Q9NZU7 370 aa15.52■□□□□ 0.08
CHGA-205ENST00000556098 TRPM1Q7Z4N2 1603 aa15.52■□□□□ 0.08
CHGA-205ENST00000556098 DIEXFQ68CQ4 756 aaKnown RBP15.51■□□□□ 0.07
CHGA-205ENST00000556098 ZNF784Q8NCA9 323 aaPredicted RBP15.51■□□□□ 0.07
CHGA-205ENST00000556098 FHDC1Q9C0D6 1143 aaPredicted RBP15.51■□□□□ 0.07
CHGA-205ENST00000556098 TUBGCP6Q96RT7 1819 aa15.51■□□□□ 0.07
CHGA-205ENST00000556098 AATKQ6ZMQ8 1374 aa15.5■□□□□ 0.07
CHGA-205ENST00000556098 WDR17Q8IZU2 1322 aa15.5■□□□□ 0.07
CHGA-205ENST00000556098 TXNRD1Q16881 649 aa15.5■□□□□ 0.07
CHGA-205ENST00000556098 L3MBTL2Q969R5 705 aa15.5■□□□□ 0.07
CHGA-205ENST00000556098 ACSBG1Q96GR2 724 aa15.5■□□□□ 0.07
CHGA-205ENST00000556098 CPSF1Q10570 1443 aaKnown RBP15.5■□□□□ 0.07
CHGA-205ENST00000556098 PELP1Q8IZL8 1130 aaKnown RBP15.49■□□□□ 0.07
CHGA-205ENST00000556098 AXIN2Q9Y2T1 843 aa15.49■□□□□ 0.07
CHGA-205ENST00000556098 MON2Q7Z3U7 1717 aa15.48■□□□□ 0.07
CHGA-205ENST00000556098 PROM2Q8N271 834 aa15.48■□□□□ 0.07
CHGA-205ENST00000556098 EXOC5O00471 708 aa15.47■□□□□ 0.07
CHGA-205ENST00000556098 PTGER2P43116 358 aa15.47■□□□□ 0.07
CHGA-205ENST00000556098 SLC15A2Q16348 729 aa15.47■□□□□ 0.07
CHGA-205ENST00000556098 SYT17Q9BSW7 474 aa15.46■□□□□ 0.07
CHGA-205ENST00000556098 CDCA7Q9BWT1 371 aaPredicted RBP15.45■□□□□ 0.06
CHGA-205ENST00000556098 BRD4O60885 1362 aaPredicted RBP15.45■□□□□ 0.06
CHGA-205ENST00000556098 TNS2Q63HR2 1409 aa15.44■□□□□ 0.06
CHGA-205ENST00000556098 PAPPAQ13219 1627 aa15.44■□□□□ 0.06
CHGA-205ENST00000556098 QSER1Q2KHR3 1735 aa15.44■□□□□ 0.06
CHGA-205ENST00000556098 DOT1LQ8TEK3 1739 aa15.44■□□□□ 0.06
CHGA-205ENST00000556098 GPR162Q16538 588 aa15.44■□□□□ 0.06
CHGA-205ENST00000556098 MTFR1LQ9H019 292 aa15.44■□□□□ 0.06
CHGA-205ENST00000556098 RGPD2P0DJD1 1756 aa15.44■□□□□ 0.06
CHGA-205ENST00000556098 KCNH5Q8NCM2 988 aa15.43■□□□□ 0.06
CHGA-205ENST00000556098 ARXQ96QS3 562 aa15.43■□□□□ 0.06
CHGA-205ENST00000556098 CARD10Q9BWT7 1032 aa15.43■□□□□ 0.06
CHGA-205ENST00000556098 NFAT5O94916 1531 aa15.43■□□□□ 0.06
CHGA-205ENST00000556098 EVC2Q86UK5 1308 aa15.43■□□□□ 0.06
CHGA-205ENST00000556098 ABCC6O95255 1503 aa15.42■□□□□ 0.06
CHGA-205ENST00000556098 TTC21BQ7Z4L5 1316 aa15.42■□□□□ 0.06
CHGA-205ENST00000556098 CCDC7Q96M83 1385 aa15.41■□□□□ 0.06
CHGA-205ENST00000556098 EIF4G2P78344 907 aaKnown RBP eCLIP15.41■□□□□ 0.06
CHGA-205ENST00000556098 ARHGEF25Q86VW2 580 aa15.41■□□□□ 0.06
CHGA-205ENST00000556098 NLRP2Q9NX02 1062 aa15.41■□□□□ 0.06
CHGA-205ENST00000556098 KTN1Q86UP2 1357 aaKnown RBP15.4■□□□□ 0.06
CHGA-205ENST00000556098 C1QTNF8P60827 252 aa15.4■□□□□ 0.06
CHGA-205ENST00000556098 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.4■□□□□ 0.06
CHGA-205ENST00000556098 FAM208AQ9UK61 1670 aaKnown RBP15.38■□□□□ 0.05
CHGA-205ENST00000556098 BCL9O00512 1426 aa15.38■□□□□ 0.05
CHGA-205ENST00000556098 ZNF827Q17R98 1081 aa15.37■□□□□ 0.05
CHGA-205ENST00000556098 TTC21AQ8NDW8 1320 aa15.37■□□□□ 0.05
CHGA-205ENST00000556098 USP54Q70EL1 1684 aa15.36■□□□□ 0.05
CHGA-205ENST00000556098 GIGYF1O75420 1035 aaPredicted RBP15.36■□□□□ 0.05
CHGA-205ENST00000556098 LY75O60449 1722 aa15.36■□□□□ 0.05
CHGA-205ENST00000556098 COL24A1Q17RW2 1714 aa15.35■□□□□ 0.05
CHGA-205ENST00000556098 MSH5O43196 834 aa15.35■□□□□ 0.05
CHGA-205ENST00000556098 IL2RBP14784 551 aa15.35■□□□□ 0.05
CHGA-205ENST00000556098 POLD1P28340 1107 aa15.35■□□□□ 0.05
CHGA-205ENST00000556098 SYTL4Q96C24 671 aaPredicted RBP15.35■□□□□ 0.05
CHGA-205ENST00000556098 SGIP1Q9BQI5 828 aa15.35■□□□□ 0.05
CHGA-205ENST00000556098 ZNF692Q9BU19 519 aaPredicted RBP15.35■□□□□ 0.05
CHGA-205ENST00000556098 SHANK3Q9BYB0 1731 aa15.34■□□□□ 0.05
CHGA-205ENST00000556098 KCNQ4P56696 695 aa15.34■□□□□ 0.05
CHGA-205ENST00000556098 DDX54Q8TDD1 881 aaKnown RBP15.34■□□□□ 0.05
CHGA-205ENST00000556098 LTV1Q96GA3 475 aaPredicted RBP15.34■□□□□ 0.05
CHGA-205ENST00000556098 ROCK2O75116 1388 aaKnown RBP15.34■□□□□ 0.05
CHGA-205ENST00000556098 TMC1Q8TDI8 760 aa15.33■□□□□ 0.04
CHGA-205ENST00000556098 ANKRD24Q8TF21 1146 aa15.33■□□□□ 0.04
CHGA-205ENST00000556098 NME9Q86XW9 330 aa15.32■□□□□ 0.04
CHGA-205ENST00000556098 LRRC4BQ9NT99 713 aa15.32■□□□□ 0.04
CHGA-205ENST00000556098 ERBB3P21860 1342 aa15.32■□□□□ 0.04
CHGA-205ENST00000556098 TFCP2L1Q9NZI6 479 aa15.31■□□□□ 0.04
CHGA-205ENST00000556098 USP47Q96K76 1375 aa15.31■□□□□ 0.04
CHGA-205ENST00000556098 C5P01031 1676 aa15.31■□□□□ 0.04
CHGA-205ENST00000556098 UTRNP46939 3433 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms