RNA–Protein interactions for RNA: ENST00000556079.1

TMEM260-209, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 596 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-209ENST00000556079 EVC2Q86UK5 1308 aa9.08□□□□□ -0.96
TMEM260-209ENST00000556079 SSH2Q76I76 1423 aa9.08□□□□□ -0.96
TMEM260-209ENST00000556079 LMO7Q8WWI1 1683 aa9.08□□□□□ -0.96
TMEM260-209ENST00000556079 HAX1O00165 279 aa9.08□□□□□ -0.96
TMEM260-209ENST00000556079 SOX12O15370 315 aa9.08□□□□□ -0.96
TMEM260-209ENST00000556079 CHADLQ6NUI6 762 aa9.08□□□□□ -0.96
TMEM260-209ENST00000556079 USP19O94966 1318 aa9.07□□□□□ -0.96
TMEM260-209ENST00000556079 CAMTA1Q9Y6Y1 1673 aa9.07□□□□□ -0.96
TMEM260-209ENST00000556079 ST20-MTHFSA0A0A6YYL1 179 aa9.07□□□□□ -0.96
TMEM260-209ENST00000556079 EN1Q05925 392 aaPredicted RBP9.07□□□□□ -0.96
TMEM260-209ENST00000556079 ABTB2Q8N961 1025 aa9.07□□□□□ -0.96
TMEM260-209ENST00000556079 TESK2Q96S53 571 aa9.07□□□□□ -0.96
TMEM260-209ENST00000556079 PRDM11Q9NQV5 511 aa9.07□□□□□ -0.96
TMEM260-209ENST00000556079 COL18A1P39060 1754 aa9.07□□□□□ -0.96
TMEM260-209ENST00000556079 SLIT3O75094 1523 aa9.06□□□□□ -0.96
TMEM260-209ENST00000556079 BAG6P46379 1132 aa9.06□□□□□ -0.96
TMEM260-209ENST00000556079 SLC12A5Q9H2X9 1139 aa9.06□□□□□ -0.96
TMEM260-209ENST00000556079 STRN4Q9NRL3 753 aa9.06□□□□□ -0.96
TMEM260-209ENST00000556079 CPSF1Q10570 1443 aaKnown RBP9.05□□□□□ -0.96
TMEM260-209ENST00000556079 THSD7AQ9UPZ6 1657 aa9.05□□□□□ -0.96
TMEM260-209ENST00000556079 USP47Q96K76 1375 aa9.05□□□□□ -0.96
TMEM260-209ENST00000556079 NME9Q86XW9 330 aa9.05□□□□□ -0.96
TMEM260-209ENST00000556079 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.05□□□□□ -0.96
TMEM260-209ENST00000556079 TMC1Q8TDI8 760 aa9.05□□□□□ -0.96
TMEM260-209ENST00000556079 TTC21BQ7Z4L5 1316 aa9.05□□□□□ -0.96
TMEM260-209ENST00000556079 MYOM1P52179 1685 aa9.04□□□□□ -0.96
TMEM260-209ENST00000556079 A0A1W2PP64 1363 aa9.04□□□□□ -0.96
TMEM260-209ENST00000556079 KTN1Q86UP2 1357 aaKnown RBP9.04□□□□□ -0.96
TMEM260-209ENST00000556079 SBNO2Q9Y2G9 1366 aa9.04□□□□□ -0.96
TMEM260-209ENST00000556079 NLRP6P59044 892 aa9.04□□□□□ -0.96
TMEM260-209ENST00000556079 R3HDM1Q15032 1099 aaKnown RBP9.04□□□□□ -0.96
TMEM260-209ENST00000556079 CCER1Q8TC90 406 aaPredicted RBP9.04□□□□□ -0.96
TMEM260-209ENST00000556079 NFAT5O94916 1531 aa9.04□□□□□ -0.96
TMEM260-209ENST00000556079 SPATA31A5Q5VU36 1347 aa9.04□□□□□ -0.96
TMEM260-209ENST00000556079 SPATA31A7Q8IWB4 1347 aa9.04□□□□□ -0.96
TMEM260-209ENST00000556079 UTRNP46939 3433 aa9.03□□□□□ -0.96
TMEM260-209ENST00000556079 LRP5O75197 1615 aa9.03□□□□□ -0.96
TMEM260-209ENST00000556079 GCP02774 474 aa9.03□□□□□ -0.96
TMEM260-209ENST00000556079 LARP1Q6PKG0 1096 aaKnown RBP9.03□□□□□ -0.96
TMEM260-209ENST00000556079 USP35Q9P2H5 1018 aa9.03□□□□□ -0.96
TMEM260-209ENST00000556079 LTN1O94822 1766 aa9.03□□□□□ -0.96
TMEM260-209ENST00000556079 FBLN1P23142 703 aa9.02□□□□□ -0.97
TMEM260-209ENST00000556079 EZH2Q15910 746 aaKnown RBP9.02□□□□□ -0.97
TMEM260-209ENST00000556079 AXIN2Q9Y2T1 843 aa9.02□□□□□ -0.97
TMEM260-209ENST00000556079 COL5A2P05997 1499 aaPredicted RBP9.02□□□□□ -0.97
TMEM260-209ENST00000556079 USP54Q70EL1 1684 aa9.01□□□□□ -0.97
TMEM260-209ENST00000556079 WNK3Q9BYP7 1800 aa9.01□□□□□ -0.97
TMEM260-209ENST00000556079 NLRP13Q86W25 1043 aa9.01□□□□□ -0.97
TMEM260-209ENST00000556079 SPATA31A1Q5TZJ5 1347 aa9.01□□□□□ -0.97
TMEM260-209ENST00000556079 CPDO75976 1380 aa9□□□□□ -0.97
TMEM260-209ENST00000556079 TRIM37O94972 964 aa9□□□□□ -0.97
TMEM260-209ENST00000556079 TNS1Q9HBL0 1735 aaKnown RBP9□□□□□ -0.97
TMEM260-209ENST00000556079 RGPD2P0DJD1 1756 aa8.99□□□□□ -0.97
TMEM260-209ENST00000556079 LRRC37A3O60309 1634 aa8.98□□□□□ -0.97
TMEM260-209ENST00000556079 OVOS2A0A0J9YW53 1432 aa8.98□□□□□ -0.97
TMEM260-209ENST00000556079 OVOS2Q6IE36 1432 aa8.98□□□□□ -0.97
TMEM260-209ENST00000556079 RGPD1P0DJD0 1748 aa8.98□□□□□ -0.97
TMEM260-209ENST00000556079 CAMKK2Q96RR4 588 aa8.98□□□□□ -0.97
TMEM260-209ENST00000556079 KIF20BQ96Q89 1820 aa8.98□□□□□ -0.97
TMEM260-209ENST00000556079 DISP2A7MBM2 1401 aa8.97□□□□□ -0.97
TMEM260-209ENST00000556079 EDC4Q6P2E9 1401 aaKnown RBP8.97□□□□□ -0.97
TMEM260-209ENST00000556079 APBA3O96018 575 aa8.97□□□□□ -0.97
TMEM260-209ENST00000556079 HSPA5P11021 654 aaKnown RBP8.97□□□□□ -0.97
TMEM260-209ENST00000556079 EVA1CP58658 441 aa8.97□□□□□ -0.97
TMEM260-209ENST00000556079 ARHGEF25Q86VW2 580 aa8.97□□□□□ -0.97
TMEM260-209ENST00000556079 SP7Q8TDD2 431 aaPredicted RBP8.97□□□□□ -0.97
TMEM260-209ENST00000556079 POLR3GLQ9BT43 218 aa8.97□□□□□ -0.97
TMEM260-209ENST00000556079 TTC21AQ8NDW8 1320 aa8.97□□□□□ -0.97
TMEM260-209ENST00000556079 BRD4O60885 1362 aaPredicted RBP8.97□□□□□ -0.97
TMEM260-209ENST00000556079 AATKQ6ZMQ8 1374 aa8.97□□□□□ -0.97
TMEM260-209ENST00000556079 PARP4Q9UKK3 1724 aaKnown RBP8.97□□□□□ -0.97
TMEM260-209ENST00000556079 FAM196AQ6ZSG2 479 aa8.96□□□□□ -0.98
TMEM260-209ENST00000556079 PTF1AQ7RTS3 328 aa8.96□□□□□ -0.98
TMEM260-209ENST00000556079 HDGFL2Q7Z4V5 671 aaPredicted RBP8.96□□□□□ -0.98
TMEM260-209ENST00000556079 PEAK1Q9H792 1746 aa8.96□□□□□ -0.98
TMEM260-209ENST00000556079 USP31Q70CQ4 1352 aa8.96□□□□□ -0.98
TMEM260-209ENST00000556079 C11orf95C9JLR9 678 aaPredicted RBP8.95□□□□□ -0.98
TMEM260-209ENST00000556079 EVX2Q03828 476 aa8.95□□□□□ -0.98
TMEM260-209ENST00000556079 CARD14Q9BXL6 1004 aa8.95□□□□□ -0.98
TMEM260-209ENST00000556079 GGNBP2Q9H3C7 697 aa8.95□□□□□ -0.98
TMEM260-209ENST00000556079 CLSPNQ9HAW4 1339 aa8.95□□□□□ -0.98
TMEM260-209ENST00000556079 CRB1P82279 1406 aa8.95□□□□□ -0.98
TMEM260-209ENST00000556079 SBF2Q86WG5 1849 aa8.94□□□□□ -0.98
TMEM260-209ENST00000556079 TMF1P82094 1093 aa8.94□□□□□ -0.98
TMEM260-209ENST00000556079 PDE3BQ13370 1112 aa8.94□□□□□ -0.98
TMEM260-209ENST00000556079 TOM1L2Q6ZVM7 507 aa8.94□□□□□ -0.98
TMEM260-209ENST00000556079 TCP11L2Q8N4U5 519 aa8.94□□□□□ -0.98
TMEM260-209ENST00000556079 LTV1Q96GA3 475 aaPredicted RBP8.94□□□□□ -0.98
TMEM260-209ENST00000556079 TERF2IPQ9NYB0 399 aa8.94□□□□□ -0.98
TMEM260-209ENST00000556079 ANKRD36BQ8N2N9 1353 aa8.94□□□□□ -0.98
TMEM260-209ENST00000556079 CSB-PGBD3P0DP91 1061 aa8.93□□□□□ -0.98
TMEM260-209ENST00000556079 WDR17Q8IZU2 1322 aa8.93□□□□□ -0.98
TMEM260-209ENST00000556079 NSD3Q9BZ95 1437 aa8.93□□□□□ -0.98
TMEM260-209ENST00000556079 FAM208AQ9UK61 1670 aaKnown RBP8.92□□□□□ -0.98
TMEM260-209ENST00000556079 MAP3K19Q56UN5 1328 aa8.92□□□□□ -0.98
TMEM260-209ENST00000556079 RRS1Q15050 365 aaKnown RBP8.92□□□□□ -0.98
TMEM260-209ENST00000556079 BARGINQ6ZT62 677 aa8.92□□□□□ -0.98
TMEM260-209ENST00000556079 PARD3Q8TEW0 1356 aa8.91□□□□□ -0.98
TMEM260-209ENST00000556079 FYB1O15117 783 aa8.91□□□□□ -0.98
TMEM260-209ENST00000556079 YY1P25490 414 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms