RNA–Protein interactions for RNA: ENST00000556078.1

EFCAB11-210, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-210ENST00000556078 FIGNL2A6NMB9 653 aa7.1□□□□□ -1.27
EFCAB11-210ENST00000556078 PHF20L1A8MW92 1017 aa7.1□□□□□ -1.27
EFCAB11-210ENST00000556078 TULP1O00294 542 aaPredicted RBP7.1□□□□□ -1.27
EFCAB11-210ENST00000556078 ADAMTS2O95450 1211 aa7.1□□□□□ -1.27
EFCAB11-210ENST00000556078 MAP10Q9P2G4 905 aa7.1□□□□□ -1.27
EFCAB11-210ENST00000556078 CECR2Q9BXF3 1484 aa7.1□□□□□ -1.27
EFCAB11-210ENST00000556078 AGERQ15109 404 aa7.09□□□□□ -1.27
EFCAB11-210ENST00000556078 SV2AQ7L0J3 742 aa7.09□□□□□ -1.27
EFCAB11-210ENST00000556078 BICRAQ9NZM4 1560 aa7.08□□□□□ -1.28
EFCAB11-210ENST00000556078 SLC35F4A4IF30 521 aa7.08□□□□□ -1.28
EFCAB11-210ENST00000556078 CFAP99D6REC4 459 aa7.08□□□□□ -1.28
EFCAB11-210ENST00000556078 FSHRP23945 695 aa7.08□□□□□ -1.28
EFCAB11-210ENST00000556078 TRMT44Q8IYL2 757 aaKnown RBP7.08□□□□□ -1.28
EFCAB11-210ENST00000556078 SPINT1O43278 529 aa7.07□□□□□ -1.28
EFCAB11-210ENST00000556078 CELA2BP08218 269 aaPredicted RBP7.07□□□□□ -1.28
EFCAB11-210ENST00000556078 SH3RF1Q7Z6J0 888 aa7.07□□□□□ -1.28
EFCAB11-210ENST00000556078 ENAMQ9NRM1 1142 aa7.07□□□□□ -1.28
EFCAB11-210ENST00000556078 ITGA6P23229 1130 aa7.06□□□□□ -1.28
EFCAB11-210ENST00000556078 DIXDC1Q155Q3 683 aa7.06□□□□□ -1.28
EFCAB11-210ENST00000556078 RSBN1LQ6PCB5 846 aaPredicted RBP7.06□□□□□ -1.28
EFCAB11-210ENST00000556078 Q6ZVU0 165 aa7.06□□□□□ -1.28
EFCAB11-210ENST00000556078 CCDC116Q8IYX3 515 aa7.06□□□□□ -1.28
EFCAB11-210ENST00000556078 ARMC2Q8NEN0 867 aa7.06□□□□□ -1.28
EFCAB11-210ENST00000556078 FURINP09958 794 aa7.05□□□□□ -1.28
EFCAB11-210ENST00000556078 BAG6P46379 1132 aa7.05□□□□□ -1.28
EFCAB11-210ENST00000556078 VASH1Q7L8A9 365 aaPredicted RBP7.05□□□□□ -1.28
EFCAB11-210ENST00000556078 PODNQ7Z5L7 613 aa7.05□□□□□ -1.28
EFCAB11-210ENST00000556078 BEND7Q8N7W2 519 aaPredicted RBP7.05□□□□□ -1.28
EFCAB11-210ENST00000556078 PCDHB15Q9Y5E8 787 aa7.05□□□□□ -1.28
EFCAB11-210ENST00000556078 PRPF38BQ5VTL8 546 aaKnown RBP7.04□□□□□ -1.28
EFCAB11-210ENST00000556078 ZBTB3Q9H5J0 574 aa7.04□□□□□ -1.28
EFCAB11-210ENST00000556078 HRCP23327 699 aa7.03□□□□□ -1.28
EFCAB11-210ENST00000556078 SRSF11Q05519 484 aaKnown RBP7.03□□□□□ -1.28
EFCAB11-210ENST00000556078 NBPF14Q5TI25 921 aa7.03□□□□□ -1.28
EFCAB11-210ENST00000556078 SH3BP5LQ7L8J4 393 aa7.03□□□□□ -1.28
EFCAB11-210ENST00000556078 TBC1D2Q9BYX2 928 aa7.03□□□□□ -1.28
EFCAB11-210ENST00000556078 AMHR2Q16671 573 aa7.02□□□□□ -1.29
EFCAB11-210ENST00000556078 BEGAINQ9BUH8 593 aa7.02□□□□□ -1.29
EFCAB11-210ENST00000556078 PGPEP1Q9NXJ5 209 aa7.02□□□□□ -1.29
EFCAB11-210ENST00000556078 PER1O15534 1290 aaPredicted RBP7.01□□□□□ -1.29
EFCAB11-210ENST00000556078 TTLL12Q14166 644 aaPredicted RBP7.01□□□□□ -1.29
EFCAB11-210ENST00000556078 PPP1R26Q5T8A7 1209 aaPredicted RBP7.01□□□□□ -1.29
EFCAB11-210ENST00000556078 NEDD1Q8NHV4 660 aa7.01□□□□□ -1.29
EFCAB11-210ENST00000556078 CBLBQ13191 982 aa7□□□□□ -1.29
EFCAB11-210ENST00000556078 GIGYF2Q6Y7W6 1299 aaKnown RBP7□□□□□ -1.29
EFCAB11-210ENST00000556078 KRTAP4-12Q9BQ66 201 aa7□□□□□ -1.29
EFCAB11-210ENST00000556078 BTBD11A6QL63 1104 aa6.99□□□□□ -1.29
EFCAB11-210ENST00000556078 GPKOWQ92917 476 aaPredicted RBP eCLIP6.99□□□□□ -1.29
EFCAB11-210ENST00000556078 SENP3-EIF4A1A0A087X0R7 540 aa6.98□□□□□ -1.29
EFCAB11-210ENST00000556078 PLCB2Q00722 1185 aa6.98□□□□□ -1.29
EFCAB11-210ENST00000556078 MAGEB6P1A0A0J9YX57 407 aa6.97□□□□□ -1.29
EFCAB11-210ENST00000556078 CTSOP43234 321 aaPredicted RBP6.97□□□□□ -1.29
EFCAB11-210ENST00000556078 ERFEQ4G0M1 354 aa6.97□□□□□ -1.29
EFCAB11-210ENST00000556078 CABLES1Q8TDN4 633 aa6.97□□□□□ -1.29
EFCAB11-210ENST00000556078 KRTAP9-9Q9BYP9 154 aa6.97□□□□□ -1.29
EFCAB11-210ENST00000556078 KRTAP9-4Q9BYQ2 154 aa6.97□□□□□ -1.29
EFCAB11-210ENST00000556078 DHX9Q08211 1270 aaKnown RBP6.96□□□□□ -1.3
EFCAB11-210ENST00000556078 GAS6Q14393 721 aa6.96□□□□□ -1.3
EFCAB11-210ENST00000556078 RIC3Q7Z5B4 369 aa6.96□□□□□ -1.3
EFCAB11-210ENST00000556078 RNF217Q8TC41 542 aa6.95□□□□□ -1.3
EFCAB11-210ENST00000556078 INSM2Q96T92 566 aaPredicted RBP6.95□□□□□ -1.3
EFCAB11-210ENST00000556078 CDV3Q9UKY7 258 aaKnown RBP6.95□□□□□ -1.3
EFCAB11-210ENST00000556078 CUX2O14529 1486 aa6.95□□□□□ -1.3
EFCAB11-210ENST00000556078 KRBA1A5PL33 1030 aa6.94□□□□□ -1.3
EFCAB11-210ENST00000556078 TUSC1Q2TAM9 212 aa6.94□□□□□ -1.3
EFCAB11-210ENST00000556078 BARGINQ6ZT62 677 aa6.93□□□□□ -1.3
EFCAB11-210ENST00000556078 AGBL1Q96MI9 1066 aa6.93□□□□□ -1.3
EFCAB11-210ENST00000556078 KCTD15Q96SI1 283 aaPredicted RBP6.93□□□□□ -1.3
EFCAB11-210ENST00000556078 CARD14Q9BXL6 1004 aa6.93□□□□□ -1.3
EFCAB11-210ENST00000556078 POLMQ9NP87 494 aaPredicted RBP6.93□□□□□ -1.3
EFCAB11-210ENST00000556078 BCRP11274 1271 aa6.92□□□□□ -1.3
EFCAB11-210ENST00000556078 RELBQ01201 579 aa6.92□□□□□ -1.3
EFCAB11-210ENST00000556078 GMCL1Q96IK5 515 aa6.92□□□□□ -1.3
EFCAB11-210ENST00000556078 LRRC4BQ9NT99 713 aa6.92□□□□□ -1.3
EFCAB11-210ENST00000556078 LILRB3O75022 631 aa6.91□□□□□ -1.3
EFCAB11-210ENST00000556078 PDXDC2PQ6P474 469 aa6.91□□□□□ -1.3
EFCAB11-210ENST00000556078 TSC1Q92574 1164 aa6.91□□□□□ -1.3
EFCAB11-210ENST00000556078 MBIPQ9NS73 344 aa6.91□□□□□ -1.3
EFCAB11-210ENST00000556078 KDM2AQ9Y2K7 1162 aa6.91□□□□□ -1.3
EFCAB11-210ENST00000556078 KRTAP4-8A0A0G2JLE6 195 aa6.9□□□□□ -1.3
EFCAB11-210ENST00000556078 QPCTQ16769 361 aa6.9□□□□□ -1.3
EFCAB11-210ENST00000556078 CSPP1Q1MSJ5 1256 aa6.9□□□□□ -1.3
EFCAB11-210ENST00000556078 INTS6LQ5JSJ4 861 aaKnown RBP6.9□□□□□ -1.3
EFCAB11-210ENST00000556078 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.9□□□□□ -1.3
EFCAB11-210ENST00000556078 HELBQ8NG08 1087 aaPredicted RBP6.9□□□□□ -1.3
EFCAB11-210ENST00000556078 SLC10A4Q96EP9 437 aa6.9□□□□□ -1.3
EFCAB11-210ENST00000556078 CUEDC1Q9NWM3 386 aaPredicted RBP6.9□□□□□ -1.3
EFCAB11-210ENST00000556078 IGF1RP08069 1367 aa6.9□□□□□ -1.31
EFCAB11-210ENST00000556078 NUTM2BA6NNL0 878 aaPredicted RBP6.89□□□□□ -1.31
EFCAB11-210ENST00000556078 NUTM2EB1AL46 878 aaPredicted RBP6.89□□□□□ -1.31
EFCAB11-210ENST00000556078 ZMYM1Q5SVZ6 1142 aa6.89□□□□□ -1.31
EFCAB11-210ENST00000556078 NUTM2DQ5VT03 806 aaPredicted RBP6.89□□□□□ -1.31
EFCAB11-210ENST00000556078 FOXD4L5Q5VV16 416 aaPredicted RBP6.89□□□□□ -1.31
EFCAB11-210ENST00000556078 NUTM2AQ8IVF1 878 aaPredicted RBP6.89□□□□□ -1.31
EFCAB11-210ENST00000556078 PARP9Q8IXQ6 854 aa6.89□□□□□ -1.31
EFCAB11-210ENST00000556078 ZNF395Q9H8N7 513 aaPredicted RBP6.89□□□□□ -1.31
EFCAB11-210ENST00000556078 NACADO15069 1562 aa6.88□□□□□ -1.31
EFCAB11-210ENST00000556078 EIF4G1Q04637 1599 aaKnown RBP6.88□□□□□ -1.31
EFCAB11-210ENST00000556078 ZMYND10O75800 440 aa6.88□□□□□ -1.31
EFCAB11-210ENST00000556078 TRIM22Q8IYM9 498 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms