RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 TERF2IPQ9NYB0 399 aa11.02□□□□□ -0.65
PTCSC3-201ENST00000556013 BCL9O00512 1426 aa11.01□□□□□ -0.65
PTCSC3-201ENST00000556013 RGPD1P0DJD0 1748 aa11.01□□□□□ -0.65
PTCSC3-201ENST00000556013 EXOC5O00471 708 aa11□□□□□ -0.65
PTCSC3-201ENST00000556013 BCL11BQ9C0K0 894 aaPredicted RBP11□□□□□ -0.65
PTCSC3-201ENST00000556013 SLC12A5Q9H2X9 1139 aa11□□□□□ -0.65
PTCSC3-201ENST00000556013 ZBTB7CA1YPR0 619 aa10.99□□□□□ -0.65
PTCSC3-201ENST00000556013 PSDA5PKW4 1024 aaPredicted RBP10.99□□□□□ -0.65
PTCSC3-201ENST00000556013 R3HDM1Q15032 1099 aaKnown RBP10.99□□□□□ -0.65
PTCSC3-201ENST00000556013 TMC1Q8TDI8 760 aa10.99□□□□□ -0.65
PTCSC3-201ENST00000556013 TIMELESSQ9UNS1 1208 aa10.99□□□□□ -0.65
PTCSC3-201ENST00000556013 CCDC7Q96M83 1385 aa10.99□□□□□ -0.65
PTCSC3-201ENST00000556013 NINLQ9Y2I6 1382 aa10.99□□□□□ -0.65
PTCSC3-201ENST00000556013 OVOS2A0A0G2JMS6 1433 aa10.99□□□□□ -0.65
PTCSC3-201ENST00000556013 OVOS2A0A0J9YW53 1432 aa10.99□□□□□ -0.65
PTCSC3-201ENST00000556013 OVOS2Q6IE36 1432 aa10.99□□□□□ -0.65
PTCSC3-201ENST00000556013 CSB-PGBD3P0DP91 1061 aa10.98□□□□□ -0.65
PTCSC3-201ENST00000556013 TESK2Q96S53 571 aa10.98□□□□□ -0.65
PTCSC3-201ENST00000556013 ABCC6O95255 1503 aa10.98□□□□□ -0.65
PTCSC3-201ENST00000556013 COL18A1P39060 1754 aa10.98□□□□□ -0.65
PTCSC3-201ENST00000556013 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.97□□□□□ -0.65
PTCSC3-201ENST00000556013 EDC4Q6P2E9 1401 aaKnown RBP10.97□□□□□ -0.65
PTCSC3-201ENST00000556013 PARP4Q9UKK3 1724 aaKnown RBP10.97□□□□□ -0.65
PTCSC3-201ENST00000556013 AKAP12Q02952 1782 aa10.96□□□□□ -0.65
PTCSC3-201ENST00000556013 PIK3C2AO00443 1686 aa10.96□□□□□ -0.65
PTCSC3-201ENST00000556013 CD163L1Q9NR16 1453 aa10.96□□□□□ -0.65
PTCSC3-201ENST00000556013 ST20-MTHFSA0A0A6YYL1 179 aa10.96□□□□□ -0.65
PTCSC3-201ENST00000556013 MARCH10Q8NA82 808 aaPredicted RBP10.96□□□□□ -0.65
PTCSC3-201ENST00000556013 LRP5O75197 1615 aa10.95□□□□□ -0.66
PTCSC3-201ENST00000556013 ERBB3P21860 1342 aa10.95□□□□□ -0.66
PTCSC3-201ENST00000556013 CDCA8Q53HL2 280 aa10.95□□□□□ -0.66
PTCSC3-201ENST00000556013 NME9Q86XW9 330 aa10.95□□□□□ -0.66
PTCSC3-201ENST00000556013 TNS1Q9HBL0 1735 aaKnown RBP10.95□□□□□ -0.66
PTCSC3-201ENST00000556013 SOX12O15370 315 aa10.94□□□□□ -0.66
PTCSC3-201ENST00000556013 IP6K1Q92551 441 aa10.94□□□□□ -0.66
PTCSC3-201ENST00000556013 NFAT5O94916 1531 aa10.94□□□□□ -0.66
PTCSC3-201ENST00000556013 CLSPNQ9HAW4 1339 aa10.93□□□□□ -0.66
PTCSC3-201ENST00000556013 IL2RBP14784 551 aa10.93□□□□□ -0.66
PTCSC3-201ENST00000556013 TMF1P82094 1093 aa10.93□□□□□ -0.66
PTCSC3-201ENST00000556013 A0A1W2PP64 1363 aa10.92□□□□□ -0.66
PTCSC3-201ENST00000556013 PROM2Q8N271 834 aa10.92□□□□□ -0.66
PTCSC3-201ENST00000556013 ANKRD24Q8TF21 1146 aa10.92□□□□□ -0.66
PTCSC3-201ENST00000556013 COG3Q96JB2 828 aa10.92□□□□□ -0.66
PTCSC3-201ENST00000556013 SPON1Q9HCB6 807 aa10.92□□□□□ -0.66
PTCSC3-201ENST00000556013 NLRP2Q9NX02 1062 aa10.92□□□□□ -0.66
PTCSC3-201ENST00000556013 MON2Q7Z3U7 1717 aa10.92□□□□□ -0.66
PTCSC3-201ENST00000556013 USP54Q70EL1 1684 aa10.92□□□□□ -0.66
PTCSC3-201ENST00000556013 KCNQ2O43526 872 aa10.91□□□□□ -0.66
PTCSC3-201ENST00000556013 PEAK1Q9H792 1746 aa10.91□□□□□ -0.66
PTCSC3-201ENST00000556013 ANKRD36BQ8N2N9 1353 aa10.9□□□□□ -0.66
PTCSC3-201ENST00000556013 TXNRD1Q16881 649 aa10.9□□□□□ -0.66
PTCSC3-201ENST00000556013 RREB1Q92766 1687 aa10.89□□□□□ -0.67
PTCSC3-201ENST00000556013 LRRC37A3O60309 1634 aa10.88□□□□□ -0.67
PTCSC3-201ENST00000556013 FYB1O15117 783 aa10.88□□□□□ -0.67
PTCSC3-201ENST00000556013 HMGB2P26583 209 aaKnown RBP10.88□□□□□ -0.67
PTCSC3-201ENST00000556013 AMPHP49418 695 aa10.88□□□□□ -0.67
PTCSC3-201ENST00000556013 TNS2Q63HR2 1409 aa10.88□□□□□ -0.67
PTCSC3-201ENST00000556013 PTF1AQ7RTS3 328 aa10.88□□□□□ -0.67
PTCSC3-201ENST00000556013 RGPD3A6NKT7 1758 aaPredicted RBP10.88□□□□□ -0.67
PTCSC3-201ENST00000556013 RGPD4Q7Z3J3 1758 aa10.88□□□□□ -0.67
PTCSC3-201ENST00000556013 CGNL1Q0VF96 1302 aa10.87□□□□□ -0.67
PTCSC3-201ENST00000556013 SBF2Q86WG5 1849 aa10.87□□□□□ -0.67
PTCSC3-201ENST00000556013 HOXC9P31274 260 aa10.87□□□□□ -0.67
PTCSC3-201ENST00000556013 SLC15A2Q16348 729 aa10.87□□□□□ -0.67
PTCSC3-201ENST00000556013 STK32BQ9NY57 414 aa10.87□□□□□ -0.67
PTCSC3-201ENST00000556013 RGPD5Q99666 1765 aa10.87□□□□□ -0.67
PTCSC3-201ENST00000556013 KIF24Q5T7B8 1368 aa10.87□□□□□ -0.67
PTCSC3-201ENST00000556013 USP47Q96K76 1375 aa10.87□□□□□ -0.67
PTCSC3-201ENST00000556013 MAP3K19Q56UN5 1328 aa10.86□□□□□ -0.67
PTCSC3-201ENST00000556013 NUP188Q5SRE5 1749 aa10.85□□□□□ -0.67
PTCSC3-201ENST00000556013 DCAF8L1A6NGE4 600 aa10.85□□□□□ -0.67
PTCSC3-201ENST00000556013 SLC27A3Q5K4L6 730 aa10.85□□□□□ -0.67
PTCSC3-201ENST00000556013 ANO8Q9HCE9 1232 aaPredicted RBP10.85□□□□□ -0.67
PTCSC3-201ENST00000556013 PPP1R1BQ9UD71 204 aaPredicted RBP10.85□□□□□ -0.67
PTCSC3-201ENST00000556013 RTL1A6NKG5 1358 aa10.85□□□□□ -0.67
PTCSC3-201ENST00000556013 ZCRB1Q8TBF4 217 aaKnown RBP10.84□□□□□ -0.67
PTCSC3-201ENST00000556013 SLC16A10Q8TF71 515 aa10.83□□□□□ -0.68
PTCSC3-201ENST00000556013 ACSBG1Q96GR2 724 aa10.83□□□□□ -0.68
PTCSC3-201ENST00000556013 MTFR1LQ9H019 292 aa10.83□□□□□ -0.68
PTCSC3-201ENST00000556013 WNK3Q9BYP7 1800 aa10.83□□□□□ -0.68
PTCSC3-201ENST00000556013 NBPF6Q5VWK0 638 aa10.82□□□□□ -0.68
PTCSC3-201ENST00000556013 DDX54Q8TDD1 881 aaKnown RBP10.82□□□□□ -0.68
PTCSC3-201ENST00000556013 LTV1Q96GA3 475 aaPredicted RBP10.82□□□□□ -0.68
PTCSC3-201ENST00000556013 NBPF4Q96M43 638 aa10.82□□□□□ -0.68
PTCSC3-201ENST00000556013 GGNBP2Q9H3C7 697 aa10.82□□□□□ -0.68
PTCSC3-201ENST00000556013 INSRP06213 1382 aa10.81□□□□□ -0.68
PTCSC3-201ENST00000556013 LTN1O94822 1766 aa10.81□□□□□ -0.68
PTCSC3-201ENST00000556013 FBLN1P23142 703 aa10.81□□□□□ -0.68
PTCSC3-201ENST00000556013 TATP17735 454 aaPredicted RBP10.8□□□□□ -0.68
PTCSC3-201ENST00000556013 PTGER2P43116 358 aa10.8□□□□□ -0.68
PTCSC3-201ENST00000556013 RRS1Q15050 365 aaKnown RBP10.8□□□□□ -0.68
PTCSC3-201ENST00000556013 RAPGEF4Q8WZA2 1011 aa10.8□□□□□ -0.68
PTCSC3-201ENST00000556013 CARD14Q9BXL6 1004 aa10.8□□□□□ -0.68
PTCSC3-201ENST00000556013 FAM208AQ9UK61 1670 aaKnown RBP10.79□□□□□ -0.68
PTCSC3-201ENST00000556013 FLT4P35916 1363 aa10.79□□□□□ -0.68
PTCSC3-201ENST00000556013 SMG6Q86US8 1419 aaKnown RBP10.79□□□□□ -0.68
PTCSC3-201ENST00000556013 PRIM1P49642 420 aaKnown RBP10.79□□□□□ -0.68
PTCSC3-201ENST00000556013 HSP90AB2PQ58FF8 381 aa10.79□□□□□ -0.68
PTCSC3-201ENST00000556013 AKT1S1Q96B36 256 aa10.79□□□□□ -0.68
PTCSC3-201ENST00000556013 SGIP1Q9BQI5 828 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms