RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 CCDC173Q0VFZ6 552 aa12.78□□□□□ -0.36
EFCAB11-208ENST00000555872 PLEKHH1Q9ULM0 1364 aa12.78□□□□□ -0.36
EFCAB11-208ENST00000555872 MROH1Q8NDA8 1641 aa12.78□□□□□ -0.36
EFCAB11-208ENST00000555872 UQCRHLA0A096LP55 91 aa12.77□□□□□ -0.36
EFCAB11-208ENST00000555872 UQCRHP07919 91 aa12.77□□□□□ -0.36
EFCAB11-208ENST00000555872 FAM177A1Q8N128 213 aaPredicted RBP12.77□□□□□ -0.36
EFCAB11-208ENST00000555872 DIP2CQ9Y2E4 1556 aa12.77□□□□□ -0.36
EFCAB11-208ENST00000555872 STRCQ7RTU9 1775 aa12.77□□□□□ -0.36
EFCAB11-208ENST00000555872 PKD2Q13563 968 aa12.77□□□□□ -0.37
EFCAB11-208ENST00000555872 IFFO2Q5TF58 517 aa12.77□□□□□ -0.37
EFCAB11-208ENST00000555872 BORCS6Q96GS4 357 aa12.77□□□□□ -0.37
EFCAB11-208ENST00000555872 TRIM6-TRIM34B2RNG4 842 aa12.76□□□□□ -0.37
EFCAB11-208ENST00000555872 SATB1Q01826 763 aa12.76□□□□□ -0.37
EFCAB11-208ENST00000555872 DNAJC14Q6Y2X3 702 aaPredicted RBP12.76□□□□□ -0.37
EFCAB11-208ENST00000555872 IFNLR1Q8IU57 520 aaPredicted RBP12.76□□□□□ -0.37
EFCAB11-208ENST00000555872 ZNF513Q8N8E2 541 aaPredicted RBP12.76□□□□□ -0.37
EFCAB11-208ENST00000555872 TRIM34Q9BYJ4 488 aa12.76□□□□□ -0.37
EFCAB11-208ENST00000555872 PER1O15534 1290 aaPredicted RBP12.76□□□□□ -0.37
EFCAB11-208ENST00000555872 NBPF9Q3BBW0 867 aa12.76□□□□□ -0.37
EFCAB11-208ENST00000555872 CAPN2P17655 700 aa12.75□□□□□ -0.37
EFCAB11-208ENST00000555872 NASPP49321 788 aaPredicted RBP12.75□□□□□ -0.37
EFCAB11-208ENST00000555872 REREQ9P2R6 1566 aa12.75□□□□□ -0.37
EFCAB11-208ENST00000555872 LMTK2Q8IWU2 1503 aa12.75□□□□□ -0.37
EFCAB11-208ENST00000555872 E9PCH4 1651 aa12.75□□□□□ -0.37
EFCAB11-208ENST00000555872 SIRT1Q96EB6 747 aa12.75□□□□□ -0.37
EFCAB11-208ENST00000555872 PPP1R9BQ96SB3 815 aa12.75□□□□□ -0.37
EFCAB11-208ENST00000555872 ARID4AP29374 1257 aaPredicted RBP12.75□□□□□ -0.37
EFCAB11-208ENST00000555872 OTUD6BQ8N6M0 293 aa12.75□□□□□ -0.37
EFCAB11-208ENST00000555872 INSRP06213 1382 aa12.74□□□□□ -0.37
EFCAB11-208ENST00000555872 KANK1Q14678 1352 aa12.74□□□□□ -0.37
EFCAB11-208ENST00000555872 CLUAP1Q96AJ1 413 aa12.74□□□□□ -0.37
EFCAB11-208ENST00000555872 MADDQ8WXG6 1647 aa12.73□□□□□ -0.37
EFCAB11-208ENST00000555872 FOXD4L6Q3SYB3 417 aaPredicted RBP12.73□□□□□ -0.37
EFCAB11-208ENST00000555872 FOXD4L3Q6VB84 417 aaPredicted RBP12.73□□□□□ -0.37
EFCAB11-208ENST00000555872 XPCQ01831 940 aaPredicted RBP12.73□□□□□ -0.37
EFCAB11-208ENST00000555872 SPHKAPQ2M3C7 1700 aa12.73□□□□□ -0.37
EFCAB11-208ENST00000555872 COG6Q9Y2V7 657 aa12.73□□□□□ -0.37
EFCAB11-208ENST00000555872 SLFN5Q08AF3 891 aa12.72□□□□□ -0.37
EFCAB11-208ENST00000555872 TNPO1Q92973 898 aaKnown RBP12.72□□□□□ -0.37
EFCAB11-208ENST00000555872 C22orf23Q9BZE7 217 aa12.72□□□□□ -0.37
EFCAB11-208ENST00000555872 ZC3H13Q5T200 1668 aaKnown RBP12.72□□□□□ -0.37
EFCAB11-208ENST00000555872 CCDC96Q2M329 555 aa12.72□□□□□ -0.37
EFCAB11-208ENST00000555872 CEP83Q9Y592 693 aa12.72□□□□□ -0.37
EFCAB11-208ENST00000555872 RALGAPBQ86X10 1494 aa12.72□□□□□ -0.37
EFCAB11-208ENST00000555872 MFAP1P55081 439 aaKnown RBP12.71□□□□□ -0.37
EFCAB11-208ENST00000555872 WDR43Q15061 677 aaKnown RBP eCLIP12.71□□□□□ -0.37
EFCAB11-208ENST00000555872 HSCBQ8IWL3 235 aa12.71□□□□□ -0.37
EFCAB11-208ENST00000555872 PANK1Q8TE04 598 aa12.71□□□□□ -0.37
EFCAB11-208ENST00000555872 CGNL1Q0VF96 1302 aa12.71□□□□□ -0.37
EFCAB11-208ENST00000555872 ZNF521Q96K83 1311 aa12.71□□□□□ -0.38
EFCAB11-208ENST00000555872 SPINK5Q9NQ38 1064 aaPredicted RBP12.7□□□□□ -0.38
EFCAB11-208ENST00000555872 NEURL4Q96JN8 1562 aa12.7□□□□□ -0.38
EFCAB11-208ENST00000555872 DYNC1I1O14576 645 aa12.7□□□□□ -0.38
EFCAB11-208ENST00000555872 RAPGEF3O95398 923 aa12.7□□□□□ -0.38
EFCAB11-208ENST00000555872 ARMCX6Q7L4S7 300 aa12.7□□□□□ -0.38
EFCAB11-208ENST00000555872 GBP4Q96PP9 640 aa12.7□□□□□ -0.38
EFCAB11-208ENST00000555872 TRPM2O94759 1503 aa12.7□□□□□ -0.38
EFCAB11-208ENST00000555872 EFCAB6Q5THR3 1501 aa12.7□□□□□ -0.38
EFCAB11-208ENST00000555872 CEP152O94986 1710 aa12.7□□□□□ -0.38
EFCAB11-208ENST00000555872 FER1L4A9Z1Z3 1794 aa12.69□□□□□ -0.38
EFCAB11-208ENST00000555872 SKOR2Q2VWA4 1001 aaPredicted RBP12.69□□□□□ -0.38
EFCAB11-208ENST00000555872 NBPF10Q6P3W6 841 aaKnown RBP12.69□□□□□ -0.38
EFCAB11-208ENST00000555872 CBX1P83916 185 aa12.69□□□□□ -0.38
EFCAB11-208ENST00000555872 RAI14Q9P0K7 980 aa12.69□□□□□ -0.38
EFCAB11-208ENST00000555872 PDZRN3Q9UPQ7 1066 aa12.69□□□□□ -0.38
EFCAB11-208ENST00000555872 PLA2R1Q13018 1463 aa12.69□□□□□ -0.38
EFCAB11-208ENST00000555872 KIF3BO15066 747 aa12.68□□□□□ -0.38
EFCAB11-208ENST00000555872 CT47B1P0C2W7 299 aaPredicted RBP12.68□□□□□ -0.38
EFCAB11-208ENST00000555872 PANK3Q9H999 370 aa12.68□□□□□ -0.38
EFCAB11-208ENST00000555872 TERF2IPQ9NYB0 399 aa12.68□□□□□ -0.38
EFCAB11-208ENST00000555872 PCDH10Q9P2E7 1040 aa12.68□□□□□ -0.38
EFCAB11-208ENST00000555872 AGLP35573 1532 aa12.68□□□□□ -0.38
EFCAB11-208ENST00000555872 LRP5O75197 1615 aa12.68□□□□□ -0.38
EFCAB11-208ENST00000555872 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.68□□□□□ -0.38
EFCAB11-208ENST00000555872 CCDC144AA2RUR9 1427 aa12.68□□□□□ -0.38
EFCAB11-208ENST00000555872 UHRF1BP1Q6BDS2 1440 aa12.68□□□□□ -0.38
EFCAB11-208ENST00000555872 ARHGEF40Q8TER5 1519 aa12.67□□□□□ -0.38
EFCAB11-208ENST00000555872 DCAF8L1A6NGE4 600 aa12.67□□□□□ -0.38
EFCAB11-208ENST00000555872 PDE3AQ14432 1141 aa12.67□□□□□ -0.38
EFCAB11-208ENST00000555872 CCDC146Q8IYE0 955 aa12.67□□□□□ -0.38
EFCAB11-208ENST00000555872 NOL7Q9UMY1 257 aaKnown RBP12.67□□□□□ -0.38
EFCAB11-208ENST00000555872 RIMS1Q86UR5 1692 aaKnown RBP12.66□□□□□ -0.38
EFCAB11-208ENST00000555872 RINLQ6ZS11 566 aa12.66□□□□□ -0.38
EFCAB11-208ENST00000555872 CALR3Q96L12 384 aaKnown RBP12.66□□□□□ -0.38
EFCAB11-208ENST00000555872 COL17A1Q9UMD9 1497 aaPredicted RBP12.66□□□□□ -0.38
EFCAB11-208ENST00000555872 DDIT3P35638 169 aa12.66□□□□□ -0.38
EFCAB11-208ENST00000555872 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.66□□□□□ -0.38
EFCAB11-208ENST00000555872 CAMSAP1Q5T5Y3 1602 aa12.65□□□□□ -0.38
EFCAB11-208ENST00000555872 CCDC172P0C7W6 258 aa12.65□□□□□ -0.38
EFCAB11-208ENST00000555872 NBPF6Q5VWK0 638 aa12.65□□□□□ -0.38
EFCAB11-208ENST00000555872 NBPF5PQ86XG9 351 aaPredicted RBP12.65□□□□□ -0.38
EFCAB11-208ENST00000555872 TRMT2AQ8IZ69 625 aaKnown RBP12.65□□□□□ -0.38
EFCAB11-208ENST00000555872 PMFBP1Q8TBY8 1022 aa12.65□□□□□ -0.38
EFCAB11-208ENST00000555872 NBPF4Q96M43 638 aa12.65□□□□□ -0.38
EFCAB11-208ENST00000555872 PCDHB15Q9Y5E8 787 aa12.65□□□□□ -0.38
EFCAB11-208ENST00000555872 NKTRP30414 1462 aaKnown RBP12.65□□□□□ -0.38
EFCAB11-208ENST00000555872 ABCC3O15438 1527 aa12.65□□□□□ -0.38
EFCAB11-208ENST00000555872 BRPF1P55201 1214 aaPredicted RBP12.65□□□□□ -0.38
EFCAB11-208ENST00000555872 MYCBPQ99417 103 aaPredicted RBP12.65□□□□□ -0.38
EFCAB11-208ENST00000555872 VASPP50552 380 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms