RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 ZNF428Q96B54 188 aa5.03□□□□□ -1.6
MTHFD1-212ENST00000555858 CDCA7Q9BWT1 371 aaPredicted RBP5.03□□□□□ -1.6
MTHFD1-212ENST00000555858 CHIC2Q9UKJ5 165 aa5.03□□□□□ -1.6
MTHFD1-212ENST00000555858 E9PSI1 815 aa5.02□□□□□ -1.61
MTHFD1-212ENST00000555858 PHLDB3Q6NSJ2 640 aa5.02□□□□□ -1.61
MTHFD1-212ENST00000555858 TRIM50Q86XT4 487 aa5.02□□□□□ -1.61
MTHFD1-212ENST00000555858 ANKMY2Q8IV38 441 aa5.02□□□□□ -1.61
MTHFD1-212ENST00000555858 ADAM32Q8TC27 787 aa5.02□□□□□ -1.61
MTHFD1-212ENST00000555858 ARHGAP9Q9BRR9 750 aa5.02□□□□□ -1.61
MTHFD1-212ENST00000555858 ATP1A2P50993 1020 aa5.01□□□□□ -1.61
MTHFD1-212ENST00000555858 FAM69CQ0P6D2 419 aa5.01□□□□□ -1.61
MTHFD1-212ENST00000555858 SWI5Q1ZZU3 235 aa5.01□□□□□ -1.61
MTHFD1-212ENST00000555858 SH3BP5LQ7L8J4 393 aa5.01□□□□□ -1.61
MTHFD1-212ENST00000555858 ZBTB33Q86T24 672 aa5.01□□□□□ -1.61
MTHFD1-212ENST00000555858 OGFOD1Q8N543 542 aa5.01□□□□□ -1.61
MTHFD1-212ENST00000555858 PRDM9Q9NQV7 894 aa5.01□□□□□ -1.61
MTHFD1-212ENST00000555858 WBP1LQ9NX94 342 aa5.01□□□□□ -1.61
MTHFD1-212ENST00000555858 ADH1BP00325 375 aa5□□□□□ -1.61
MTHFD1-212ENST00000555858 COPS2P61201 443 aa5□□□□□ -1.61
MTHFD1-212ENST00000555858 LHX8Q68G74 356 aa5□□□□□ -1.61
MTHFD1-212ENST00000555858 TRAF7Q6Q0C0 670 aa5□□□□□ -1.61
MTHFD1-212ENST00000555858 ANKRD13DQ6ZTN6 518 aa5□□□□□ -1.61
MTHFD1-212ENST00000555858 DZIP3Q86Y13 1208 aaKnown RBP5□□□□□ -1.61
MTHFD1-212ENST00000555858 UNC93B1Q9H1C4 597 aa5□□□□□ -1.61
MTHFD1-212ENST00000555858 SLAIN2Q9P270 581 aa5□□□□□ -1.61
MTHFD1-212ENST00000555858 NOD1Q9Y239 953 aa5□□□□□ -1.61
MTHFD1-212ENST00000555858 ATP2B4P23634 1241 aa4.99□□□□□ -1.61
MTHFD1-212ENST00000555858 CLDN10P78369 228 aa4.99□□□□□ -1.61
MTHFD1-212ENST00000555858 DPYDQ12882 1025 aa4.99□□□□□ -1.61
MTHFD1-212ENST00000555858 LARGE2Q8N3Y3 721 aa4.99□□□□□ -1.61
MTHFD1-212ENST00000555858 DNAAF2Q9NVR5 837 aaKnown RBP4.99□□□□□ -1.61
MTHFD1-212ENST00000555858 DOLKQ9UPQ8 538 aa4.99□□□□□ -1.61
MTHFD1-212ENST00000555858 ZPR1O75312 459 aa4.98□□□□□ -1.61
MTHFD1-212ENST00000555858 ERCC3P19447 782 aa4.98□□□□□ -1.61
MTHFD1-212ENST00000555858 NYAP1Q6ZVC0 841 aa4.98□□□□□ -1.61
MTHFD1-212ENST00000555858 SH3RF1Q7Z6J0 888 aa4.98□□□□□ -1.61
MTHFD1-212ENST00000555858 SIX5Q8N196 739 aa4.98□□□□□ -1.61
MTHFD1-212ENST00000555858 CCDC24Q8N4L8 307 aa4.98□□□□□ -1.61
MTHFD1-212ENST00000555858 C1orf216Q8TAB5 229 aa4.98□□□□□ -1.61
MTHFD1-212ENST00000555858 FAM163AQ96GL9 167 aaPredicted RBP4.98□□□□□ -1.61
MTHFD1-212ENST00000555858 ZNF594Q96JF6 807 aaPredicted RBP4.98□□□□□ -1.61
MTHFD1-212ENST00000555858 MAGEB6P1A0A0J9YX57 407 aa4.97□□□□□ -1.61
MTHFD1-212ENST00000555858 SOWAHDA6NJG2 315 aa4.97□□□□□ -1.61
MTHFD1-212ENST00000555858 TLL1O43897 1013 aa4.97□□□□□ -1.61
MTHFD1-212ENST00000555858 TSGA10IPQ3SY00 556 aa4.97□□□□□ -1.61
MTHFD1-212ENST00000555858 RNF20Q5VTR2 975 aa4.97□□□□□ -1.61
MTHFD1-212ENST00000555858 PTCRAQ6ISU1 281 aaPredicted RBP4.97□□□□□ -1.61
MTHFD1-212ENST00000555858 THSD4Q6ZMP0 1018 aa4.97□□□□□ -1.61
MTHFD1-212ENST00000555858 BPHLQ86WA6 291 aaPredicted RBP4.97□□□□□ -1.61
MTHFD1-212ENST00000555858 CCDC85AQ96PX6 553 aaPredicted RBP4.97□□□□□ -1.61
MTHFD1-212ENST00000555858 CARD14Q9BXL6 1004 aa4.97□□□□□ -1.61
MTHFD1-212ENST00000555858 MYT1LQ9UL68 1186 aa4.97□□□□□ -1.61
MTHFD1-212ENST00000555858 RBM19Q9Y4C8 960 aaKnown RBP4.97□□□□□ -1.61
MTHFD1-212ENST00000555858 RBM47A0AV96 593 aaKnown RBP4.96□□□□□ -1.62
MTHFD1-212ENST00000555858 ZBTB7BO15156 539 aaPredicted RBP4.96□□□□□ -1.62
MTHFD1-212ENST00000555858 DKK1O94907 266 aa4.96□□□□□ -1.62
MTHFD1-212ENST00000555858 SERPINB4P48594 390 aa4.96□□□□□ -1.62
MTHFD1-212ENST00000555858 SEC13P55735 322 aa4.96□□□□□ -1.62
MTHFD1-212ENST00000555858 GTF2IP78347 998 aa4.96□□□□□ -1.62
MTHFD1-212ENST00000555858 OXLD1Q5BKU9 147 aa4.96□□□□□ -1.62
MTHFD1-212ENST00000555858 SIRT1Q96EB6 747 aa4.96□□□□□ -1.62
MTHFD1-212ENST00000555858 SLC6A16Q9GZN6 736 aa4.96□□□□□ -1.62
MTHFD1-212ENST00000555858 GIGYF1O75420 1035 aaPredicted RBP4.95□□□□□ -1.62
MTHFD1-212ENST00000555858 AGERQ15109 404 aa4.95□□□□□ -1.62
MTHFD1-212ENST00000555858 NBPF20Q3BBV1 942 aa4.95□□□□□ -1.62
MTHFD1-212ENST00000555858 ERFEQ4G0M1 354 aa4.95□□□□□ -1.62
MTHFD1-212ENST00000555858 CCDC102BQ68D86 513 aa4.95□□□□□ -1.62
MTHFD1-212ENST00000555858 DNAJC14Q6Y2X3 702 aaPredicted RBP4.95□□□□□ -1.62
MTHFD1-212ENST00000555858 CCDC125Q86Z20 511 aa4.95□□□□□ -1.62
MTHFD1-212ENST00000555858 BAP1Q92560 729 aa4.95□□□□□ -1.62
MTHFD1-212ENST00000555858 SLC10A4Q96EP9 437 aa4.95□□□□□ -1.62
MTHFD1-212ENST00000555858 MTRQ99707 1265 aa4.95□□□□□ -1.62
MTHFD1-212ENST00000555858 KIAA1024Q9UPX6 916 aa4.95□□□□□ -1.62
MTHFD1-212ENST00000555858 PRMT3O60678 531 aa4.94□□□□□ -1.62
MTHFD1-212ENST00000555858 PSME1Q06323 249 aa4.94□□□□□ -1.62
MTHFD1-212ENST00000555858 USP4Q13107 963 aa4.94□□□□□ -1.62
MTHFD1-212ENST00000555858 TAS1R3Q7RTX0 852 aa4.94□□□□□ -1.62
MTHFD1-212ENST00000555858 SEPT12Q8IYM1 358 aa4.94□□□□□ -1.62
MTHFD1-212ENST00000555858 ZNF511Q8NB15 262 aa4.94□□□□□ -1.62
MTHFD1-212ENST00000555858 IL21Q9HBE4 155 aa4.94□□□□□ -1.62
MTHFD1-212ENST00000555858 CXXC1Q9P0U4 656 aaPredicted RBP4.94□□□□□ -1.62
MTHFD1-212ENST00000555858 EGFL7Q9UHF1 273 aa4.94□□□□□ -1.62
MTHFD1-212ENST00000555858 CDV3Q9UKY7 258 aaKnown RBP4.94□□□□□ -1.62
MTHFD1-212ENST00000555858 ESPNB1AK53 854 aa4.93□□□□□ -1.62
MTHFD1-212ENST00000555858 MARSP56192 900 aaKnown RBP4.93□□□□□ -1.62
MTHFD1-212ENST00000555858 OCLNQ16625 522 aa4.93□□□□□ -1.62
MTHFD1-212ENST00000555858 LINC01559Q495D7 138 aa4.93□□□□□ -1.62
MTHFD1-212ENST00000555858 C4orf48Q5BLP8 95 aa4.93□□□□□ -1.62
MTHFD1-212ENST00000555858 TPCN2Q8NHX9 752 aa4.93□□□□□ -1.62
MTHFD1-212ENST00000555858 FOXJ1Q92949 421 aa4.93□□□□□ -1.62
MTHFD1-212ENST00000555858 KCTD12Q96CX2 325 aaKnown RBP4.93□□□□□ -1.62
MTHFD1-212ENST00000555858 C1QTNF2Q9BXJ5 285 aa4.93□□□□□ -1.62
MTHFD1-212ENST00000555858 PCDH10Q9P2E7 1040 aa4.93□□□□□ -1.62
MTHFD1-212ENST00000555858 BIN2Q9UBW5 565 aaPredicted RBP4.93□□□□□ -1.62
MTHFD1-212ENST00000555858 PCDHGA11Q9Y5H2 935 aa4.93□□□□□ -1.62
MTHFD1-212ENST00000555858 UNCXA6NJT0 531 aa4.92□□□□□ -1.62
MTHFD1-212ENST00000555858 SFI1A8K8P3 1242 aa4.92□□□□□ -1.62
MTHFD1-212ENST00000555858 SCNN1AP37088 669 aa4.92□□□□□ -1.62
MTHFD1-212ENST00000555858 TJAP1Q5JTD0 557 aa4.92□□□□□ -1.62
MTHFD1-212ENST00000555858 TRMT44Q8IYL2 757 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms