RNA–Protein interactions for RNA: ENST00000555855.5

FOXN3-211, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-211ENST00000555855 ARHGEF25Q86VW2 580 aa27.83■■■□□ 2.05
FOXN3-211ENST00000555855 TTC21BQ7Z4L5 1316 aa27.83■■■□□ 2.05
FOXN3-211ENST00000555855 SOX12O15370 315 aa27.81■■■□□ 2.04
FOXN3-211ENST00000555855 YY1P25490 414 aa27.81■■■□□ 2.04
FOXN3-211ENST00000555855 MARCH10Q8NA82 808 aaPredicted RBP27.8■■■□□ 2.04
FOXN3-211ENST00000555855 CARD10Q9BWT7 1032 aa27.8■■■□□ 2.04
FOXN3-211ENST00000555855 TTC21AQ8NDW8 1320 aa27.79■■■□□ 2.04
FOXN3-211ENST00000555855 EXOC5O00471 708 aa27.79■■■□□ 2.04
FOXN3-211ENST00000555855 SIN3AQ96ST3 1273 aa27.77■■■□□ 2.04
FOXN3-211ENST00000555855 CPSF1Q10570 1443 aaKnown RBP27.76■■■□□ 2.04
FOXN3-211ENST00000555855 SBF2Q86WG5 1849 aa27.76■■■□□ 2.04
FOXN3-211ENST00000555855 COL18A1P39060 1754 aa27.76■■■□□ 2.03
FOXN3-211ENST00000555855 ROCK2O75116 1388 aaKnown RBP27.76■■■□□ 2.03
FOXN3-211ENST00000555855 PEAK1Q9H792 1746 aa27.76■■■□□ 2.03
FOXN3-211ENST00000555855 NEUROD1Q13562 356 aa27.76■■■□□ 2.03
FOXN3-211ENST00000555855 PTF1AQ7RTS3 328 aa27.76■■■□□ 2.03
FOXN3-211ENST00000555855 PIK3C2AO00443 1686 aa27.75■■■□□ 2.03
FOXN3-211ENST00000555855 LRRC37A3O60309 1634 aa27.74■■■□□ 2.03
FOXN3-211ENST00000555855 NINLQ9Y2I6 1382 aa27.73■■■□□ 2.03
FOXN3-211ENST00000555855 PROM2Q8N271 834 aa27.73■■■□□ 2.03
FOXN3-211ENST00000555855 ANO8Q9HCE9 1232 aaPredicted RBP27.73■■■□□ 2.03
FOXN3-211ENST00000555855 TRPM1Q7Z4N2 1603 aa27.73■■■□□ 2.03
FOXN3-211ENST00000555855 KTN1Q86UP2 1357 aaKnown RBP27.73■■■□□ 2.03
FOXN3-211ENST00000555855 BCL9O00512 1426 aa27.72■■■□□ 2.03
FOXN3-211ENST00000555855 RGPD3A6NKT7 1758 aaPredicted RBP27.71■■■□□ 2.03
FOXN3-211ENST00000555855 RGPD4Q7Z3J3 1758 aa27.71■■■□□ 2.03
FOXN3-211ENST00000555855 STK32BQ9NY57 414 aa27.71■■■□□ 2.03
FOXN3-211ENST00000555855 CCDC7Q96M83 1385 aa27.7■■■□□ 2.02
FOXN3-211ENST00000555855 TXNRD1Q16881 649 aa27.69■■■□□ 2.02
FOXN3-211ENST00000555855 RGPD5Q99666 1765 aa27.68■■■□□ 2.02
FOXN3-211ENST00000555855 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.68■■■□□ 2.025e-7■■□□□ 13.1
FOXN3-211ENST00000555855 ZBTB7AO95365 584 aa27.67■■■□□ 2.02
FOXN3-211ENST00000555855 AKAP12Q02952 1782 aa27.65■■■□□ 2.02
FOXN3-211ENST00000555855 ATF5Q9Y2D1 282 aaPredicted RBP27.65■■■□□ 2.02
FOXN3-211ENST00000555855 SLC15A2Q16348 729 aa27.64■■■□□ 2.02
FOXN3-211ENST00000555855 PDGFDQ9GZP0 370 aaPredicted RBP27.64■■■□□ 2.02
FOXN3-211ENST00000555855 NLRP2Q9NX02 1062 aa27.64■■■□□ 2.02
FOXN3-211ENST00000555855 WNK3Q9BYP7 1800 aa27.63■■■□□ 2.01
FOXN3-211ENST00000555855 TMC1Q8TDI8 760 aa27.63■■■□□ 2.01
FOXN3-211ENST00000555855 HDGFL2Q7Z4V5 671 aaPredicted RBP27.61■■■□□ 2.01
FOXN3-211ENST00000555855 USP31Q70CQ4 1352 aa27.6■■■□□ 2.01
FOXN3-211ENST00000555855 ACSBG1Q96GR2 724 aa27.6■■■□□ 2.01
FOXN3-211ENST00000555855 NFAT5O94916 1531 aa27.59■■■□□ 2.01
FOXN3-211ENST00000555855 IL2RBP14784 551 aa27.59■■■□□ 2.01
FOXN3-211ENST00000555855 CARD11Q9BXL7 1154 aa27.59■■■□□ 2.01
FOXN3-211ENST00000555855 PTGER2P43116 358 aa27.58■■■□□ 2.01
FOXN3-211ENST00000555855 NME9Q86XW9 330 aa27.58■■■□□ 2.01
FOXN3-211ENST00000555855 CASZ1Q86V15 1759 aa27.58■■■□□ 2
FOXN3-211ENST00000555855 KAT6BQ8WYB5 2073 aa27.57■■■□□ 2
FOXN3-211ENST00000555855 MTFR1LQ9H019 292 aa27.57■■■□□ 2
FOXN3-211ENST00000555855 ERBB3P21860 1342 aa27.57■■■□□ 2
FOXN3-211ENST00000555855 TNS2Q63HR2 1409 aa27.57■■■□□ 2
FOXN3-211ENST00000555855 ABCC6O95255 1503 aa27.57■■■□□ 2
FOXN3-211ENST00000555855 ANKRD24Q8TF21 1146 aa27.55■■■□□ 2
FOXN3-211ENST00000555855 TERF2IPQ9NYB0 399 aa27.55■■■□□ 2
FOXN3-211ENST00000555855 SBNO2Q9Y2G9 1366 aa27.55■■■□□ 2
FOXN3-211ENST00000555855 SLC12A5Q9H2X9 1139 aa27.54■■■□□ 2
FOXN3-211ENST00000555855 SYT17Q9BSW7 474 aa27.53■■■□□ 2
FOXN3-211ENST00000555855 MON2Q7Z3U7 1717 aa27.52■■■□□ 2
FOXN3-211ENST00000555855 FHDC1Q9C0D6 1143 aaPredicted RBP27.51■■□□□ 1.99
FOXN3-211ENST00000555855 PUS7Q96PZ0 661 aaKnown RBP27.47■■□□□ 1.99
FOXN3-211ENST00000555855 NHSQ6T4R5 1651 aa27.46■■□□□ 1.99
FOXN3-211ENST00000555855 CD163L1Q9NR16 1453 aa27.46■■□□□ 1.99
FOXN3-211ENST00000555855 IP6K1Q92551 441 aa27.46■■□□□ 1.99
FOXN3-211ENST00000555855 ARXQ96QS3 562 aa27.46■■□□□ 1.99
FOXN3-211ENST00000555855 EDC4Q6P2E9 1401 aaKnown RBP27.46■■□□□ 1.99
FOXN3-211ENST00000555855 DDX54Q8TDD1 881 aaKnown RBP27.45■■□□□ 1.98
FOXN3-211ENST00000555855 SGIP1Q9BQI5 828 aa27.45■■□□□ 1.98
FOXN3-211ENST00000555855 MYOM1P52179 1685 aa27.45■■□□□ 1.98
FOXN3-211ENST00000555855 LTV1Q96GA3 475 aaPredicted RBP27.44■■□□□ 1.98
FOXN3-211ENST00000555855 LTN1O94822 1766 aa27.44■■□□□ 1.98
FOXN3-211ENST00000555855 USP54Q70EL1 1684 aa27.42■■□□□ 1.98
FOXN3-211ENST00000555855 A0A1W2PP64 1363 aa27.4■■□□□ 1.98
FOXN3-211ENST00000555855 SLC27A3Q5K4L6 730 aa27.4■■□□□ 1.98
FOXN3-211ENST00000555855 LRRC4BQ9NT99 713 aa27.4■■□□□ 1.98
FOXN3-211ENST00000555855 SLC24A1O60721 1099 aa27.39■■□□□ 1.98
FOXN3-211ENST00000555855 ZNF827Q17R98 1081 aa27.39■■□□□ 1.98
FOXN3-211ENST00000555855 ZNF784Q8NCA9 323 aaPredicted RBP27.39■■□□□ 1.98
FOXN3-211ENST00000555855 SLC16A10Q8TF71 515 aa27.39■■□□□ 1.98
FOXN3-211ENST00000555855 COG3Q96JB2 828 aa27.39■■□□□ 1.98
FOXN3-211ENST00000555855 BTAF1O14981 1849 aa27.39■■□□□ 1.97
FOXN3-211ENST00000555855 TONSLQ96HA7 1378 aa27.38■■□□□ 1.97
FOXN3-211ENST00000555855 AMPHP49418 695 aa27.37■■□□□ 1.97
FOXN3-211ENST00000555855 SYTL4Q96C24 671 aaPredicted RBP27.37■■□□□ 1.97
FOXN3-211ENST00000555855 POLD1P28340 1107 aa27.35■■□□□ 1.97
FOXN3-211ENST00000555855 AKT1S1Q96B36 256 aa27.35■■□□□ 1.97
FOXN3-211ENST00000555855 PRIM1P49642 420 aaKnown RBP27.34■■□□□ 1.97
FOXN3-211ENST00000555855 GPR162Q16538 588 aa27.33■■□□□ 1.97
FOXN3-211ENST00000555855 TFCP2L1Q9NZI6 479 aa27.33■■□□□ 1.97
FOXN3-211ENST00000555855 HOXC9P31274 260 aa27.32■■□□□ 1.96
FOXN3-211ENST00000555855 ZCRB1Q8TBF4 217 aaKnown RBP27.32■■□□□ 1.96
FOXN3-211ENST00000555855 MAP3K5Q99683 1374 aa27.32■■□□□ 1.96
FOXN3-211ENST00000555855 PAPPAQ13219 1627 aa27.31■■□□□ 1.96
FOXN3-211ENST00000555855 ST20-MTHFSA0A0A6YYL1 179 aa27.31■■□□□ 1.96
FOXN3-211ENST00000555855 KLHL34Q8N239 644 aa27.31■■□□□ 1.96
FOXN3-211ENST00000555855 MAP3K19Q56UN5 1328 aa27.31■■□□□ 1.96
FOXN3-211ENST00000555855 CHD4Q14839 1912 aa27.3■■□□□ 1.96
FOXN3-211ENST00000555855 FBLN1P23142 703 aa27.28■■□□□ 1.96
FOXN3-211ENST00000555855 TESK2Q96S53 571 aa27.28■■□□□ 1.96
FOXN3-211ENST00000555855 ANKRD36BQ8N2N9 1353 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms