RNA–Protein interactions for RNA: ENST00000555780.1

PCNX1-210, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 384 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-210ENST00000555780 NRKQ7Z2Y5 1582 aa9.52□□□□□ -0.89
PCNX1-210ENST00000555780 CDAN1Q8IWY9 1227 aa9.52□□□□□ -0.89
PCNX1-210ENST00000555780 NGLY1Q96IV0 654 aa9.52□□□□□ -0.89
PCNX1-210ENST00000555780 MARF1Q9Y4F3 1742 aaKnown RBP9.51□□□□□ -0.89
PCNX1-210ENST00000555780 ATRNO75882 1429 aa9.51□□□□□ -0.89
PCNX1-210ENST00000555780 NME9Q86XW9 330 aa9.51□□□□□ -0.89
PCNX1-210ENST00000555780 ABTB2Q8N961 1025 aa9.51□□□□□ -0.89
PCNX1-210ENST00000555780 TMC1Q8TDI8 760 aa9.51□□□□□ -0.89
PCNX1-210ENST00000555780 CARD14Q9BXL6 1004 aa9.51□□□□□ -0.89
PCNX1-210ENST00000555780 QTRT2Q9H974 415 aaKnown RBP9.51□□□□□ -0.89
PCNX1-210ENST00000555780 PIK3C2AO00443 1686 aa9.51□□□□□ -0.89
PCNX1-210ENST00000555780 AKAP12Q02952 1782 aa9.5□□□□□ -0.89
PCNX1-210ENST00000555780 ZC3H6P61129 1189 aaKnown RBP9.5□□□□□ -0.89
PCNX1-210ENST00000555780 CHRNA2Q15822 529 aa9.5□□□□□ -0.89
PCNX1-210ENST00000555780 USP21Q9UK80 565 aa9.5□□□□□ -0.89
PCNX1-210ENST00000555780 KTN1Q86UP2 1357 aaKnown RBP9.5□□□□□ -0.89
PCNX1-210ENST00000555780 KIAA0232Q92628 1395 aa9.5□□□□□ -0.89
PCNX1-210ENST00000555780 PHRF1Q9P1Y6 1649 aaKnown RBP9.49□□□□□ -0.89
PCNX1-210ENST00000555780 GCP02774 474 aa9.49□□□□□ -0.89
PCNX1-210ENST00000555780 FBLN1P23142 703 aa9.49□□□□□ -0.89
PCNX1-210ENST00000555780 ATN1P54259 1190 aaPredicted RBP9.49□□□□□ -0.89
PCNX1-210ENST00000555780 EIF4G2P78344 907 aaKnown RBP eCLIP9.49□□□□□ -0.89
PCNX1-210ENST00000555780 TMF1P82094 1093 aa9.49□□□□□ -0.89
PCNX1-210ENST00000555780 ZNF772Q68DY9 489 aaPredicted RBP9.49□□□□□ -0.89
PCNX1-210ENST00000555780 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.49□□□□□ -0.89
PCNX1-210ENST00000555780 SLIT3O75094 1523 aa9.49□□□□□ -0.89
PCNX1-210ENST00000555780 BRD4O60885 1362 aaPredicted RBP9.49□□□□□ -0.89
PCNX1-210ENST00000555780 USP31Q70CQ4 1352 aa9.49□□□□□ -0.89
PCNX1-210ENST00000555780 MON2Q7Z3U7 1717 aa9.48□□□□□ -0.89
PCNX1-210ENST00000555780 NLRP6P59044 892 aa9.48□□□□□ -0.89
PCNX1-210ENST00000555780 UNC5CLQ8IV45 518 aa9.48□□□□□ -0.89
PCNX1-210ENST00000555780 MYOM1P52179 1685 aa9.48□□□□□ -0.89
PCNX1-210ENST00000555780 GLI3P10071 1580 aa9.47□□□□□ -0.89
PCNX1-210ENST00000555780 BTG4Q9NY30 223 aa9.47□□□□□ -0.89
PCNX1-210ENST00000555780 AXIN2Q9Y2T1 843 aa9.47□□□□□ -0.89
PCNX1-210ENST00000555780 CAMTA1Q9Y6Y1 1673 aa9.47□□□□□ -0.89
PCNX1-210ENST00000555780 ANKRD36BQ8N2N9 1353 aa9.47□□□□□ -0.89
PCNX1-210ENST00000555780 RGS12O14924 1447 aa9.47□□□□□ -0.89
PCNX1-210ENST00000555780 NFAT5O94916 1531 aa9.46□□□□□ -0.89
PCNX1-210ENST00000555780 NRAPQ86VF7 1730 aa9.46□□□□□ -0.89
PCNX1-210ENST00000555780 SOCS7O14512 581 aa9.46□□□□□ -0.9
PCNX1-210ENST00000555780 FYB1O15117 783 aa9.46□□□□□ -0.9
PCNX1-210ENST00000555780 MNX1P50219 401 aaPredicted RBP9.46□□□□□ -0.9
PCNX1-210ENST00000555780 ARHGEF25Q86VW2 580 aa9.46□□□□□ -0.9
PCNX1-210ENST00000555780 NLRP13Q86W25 1043 aa9.46□□□□□ -0.9
PCNX1-210ENST00000555780 TTC21AQ8NDW8 1320 aa9.46□□□□□ -0.9
PCNX1-210ENST00000555780 CPDO75976 1380 aa9.46□□□□□ -0.9
PCNX1-210ENST00000555780 OVOS2A0A0J9YW53 1432 aa9.46□□□□□ -0.9
PCNX1-210ENST00000555780 OVOS2Q6IE36 1432 aa9.46□□□□□ -0.9
PCNX1-210ENST00000555780 EDC4Q6P2E9 1401 aaKnown RBP9.46□□□□□ -0.9
PCNX1-210ENST00000555780 LMO7Q8WWI1 1683 aa9.45□□□□□ -0.9
PCNX1-210ENST00000555780 RXRBP28702 533 aa9.45□□□□□ -0.9
PCNX1-210ENST00000555780 RBM6P78332 1123 aaKnown RBP9.45□□□□□ -0.9
PCNX1-210ENST00000555780 VPS72Q15906 364 aa9.45□□□□□ -0.9
PCNX1-210ENST00000555780 HDGFL2Q7Z4V5 671 aaPredicted RBP9.45□□□□□ -0.9
PCNX1-210ENST00000555780 GJD4Q96KN9 370 aaPredicted RBP9.45□□□□□ -0.9
PCNX1-210ENST00000555780 TRPC5Q9UL62 973 aaPredicted RBP9.45□□□□□ -0.9
PCNX1-210ENST00000555780 PLCH1Q4KWH8 1693 aa9.45□□□□□ -0.9
PCNX1-210ENST00000555780 COL18A1P39060 1754 aa9.45□□□□□ -0.9
PCNX1-210ENST00000555780 HAP1P54257 671 aaPredicted RBP9.44□□□□□ -0.9
PCNX1-210ENST00000555780 TSPYL2Q9H2G4 693 aaPredicted RBP9.44□□□□□ -0.9
PCNX1-210ENST00000555780 PRDM11Q9NQV5 511 aa9.44□□□□□ -0.9
PCNX1-210ENST00000555780 TERF2IPQ9NYB0 399 aa9.44□□□□□ -0.9
PCNX1-210ENST00000555780 KIF7Q2M1P5 1343 aa9.44□□□□□ -0.9
PCNX1-210ENST00000555780 NINLQ9Y2I6 1382 aa9.44□□□□□ -0.9
PCNX1-210ENST00000555780 COL14A1Q05707 1796 aaKnown RBP9.43□□□□□ -0.9
PCNX1-210ENST00000555780 USP54Q70EL1 1684 aa9.43□□□□□ -0.9
PCNX1-210ENST00000555780 CDK12Q9NYV4 1490 aaPredicted RBP9.43□□□□□ -0.9
PCNX1-210ENST00000555780 SOX12O15370 315 aa9.43□□□□□ -0.9
PCNX1-210ENST00000555780 ONECUT3O60422 494 aaPredicted RBP9.43□□□□□ -0.9
PCNX1-210ENST00000555780 LARP1Q6PKG0 1096 aaKnown RBP9.43□□□□□ -0.9
PCNX1-210ENST00000555780 GGNBP2Q9H3C7 697 aa9.43□□□□□ -0.9
PCNX1-210ENST00000555780 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.42□□□□□ -0.9
PCNX1-210ENST00000555780 AATKQ6ZMQ8 1374 aa9.42□□□□□ -0.9
PCNX1-210ENST00000555780 SPATA31A5Q5VU36 1347 aa9.42□□□□□ -0.9
PCNX1-210ENST00000555780 WASHC2AQ641Q2 1341 aa9.42□□□□□ -0.9
PCNX1-210ENST00000555780 SPATA31A7Q8IWB4 1347 aa9.42□□□□□ -0.9
PCNX1-210ENST00000555780 POTEFA5A3E0 1075 aa9.42□□□□□ -0.9
PCNX1-210ENST00000555780 SLC24A1O60721 1099 aa9.42□□□□□ -0.9
PCNX1-210ENST00000555780 POLR3GLQ9BT43 218 aa9.42□□□□□ -0.9
PCNX1-210ENST00000555780 PANK3Q9H999 370 aa9.42□□□□□ -0.9
PCNX1-210ENST00000555780 COL5A2P05997 1499 aaPredicted RBP9.41□□□□□ -0.9
PCNX1-210ENST00000555780 NSD3Q9BZ95 1437 aa9.41□□□□□ -0.9
PCNX1-210ENST00000555780 SPATA31A1Q5TZJ5 1347 aa9.41□□□□□ -0.9
PCNX1-210ENST00000555780 NWD2Q9ULI1 1742 aa9.41□□□□□ -0.9
PCNX1-210ENST00000555780 ZBTB7CA1YPR0 619 aa9.4□□□□□ -0.9
PCNX1-210ENST00000555780 PER1O15534 1290 aaPredicted RBP9.4□□□□□ -0.9
PCNX1-210ENST00000555780 CDCA8Q53HL2 280 aa9.4□□□□□ -0.9
PCNX1-210ENST00000555780 STRN4Q9NRL3 753 aa9.4□□□□□ -0.9
PCNX1-210ENST00000555780 CCDC7Q96M83 1385 aa9.39□□□□□ -0.91
PCNX1-210ENST00000555780 MAP3K19Q56UN5 1328 aa9.39□□□□□ -0.91
PCNX1-210ENST00000555780 FAM98CQ17RN3 349 aaKnown RBP9.39□□□□□ -0.91
PCNX1-210ENST00000555780 SEPT12Q8IYM1 358 aa9.39□□□□□ -0.91
PCNX1-210ENST00000555780 KCNH5Q8NCM2 988 aa9.39□□□□□ -0.91
PCNX1-210ENST00000555780 UPF1Q92900 1129 aaKnown RBP eCLIP9.39□□□□□ -0.91
PCNX1-210ENST00000555780 RRS1Q15050 365 aaKnown RBP9.38□□□□□ -0.91
PCNX1-210ENST00000555780 BMP2KQ9NSY1 1161 aaPredicted RBP9.38□□□□□ -0.91
PCNX1-210ENST00000555780 THSD7AQ9UPZ6 1657 aa9.37□□□□□ -0.91
PCNX1-210ENST00000555780 SPDYE4A6NLX3 237 aa9.37□□□□□ -0.91
PCNX1-210ENST00000555780 AMER1Q5JTC6 1135 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms