RNA–Protein interactions for RNA: ENST00000555688.1

LINC00641-202, long intergenic non-protein coding RNA 641, humanhuman

TSL 1 (best) BASIC

Gene LINC00641, Length 1,763 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-202ENST00000555688 C14orf93Q9H972 538 aaKnown RBP10.66□□□□□ -0.7
LINC00641-202ENST00000555688 ARHGEF40Q8TER5 1519 aa10.65□□□□□ -0.7
LINC00641-202ENST00000555688 C6orf132Q5T0Z8 1188 aa10.65□□□□□ -0.7
LINC00641-202ENST00000555688 NEXMIFQ5QGS0 1516 aa10.65□□□□□ -0.7
LINC00641-202ENST00000555688 CERKQ8TCT0 537 aa10.65□□□□□ -0.71
LINC00641-202ENST00000555688 SETBP1Q9Y6X0 1596 aa10.64□□□□□ -0.71
LINC00641-202ENST00000555688 OTUD5Q96G74 571 aa10.64□□□□□ -0.71
LINC00641-202ENST00000555688 GPBP1L1Q9HC44 474 aaPredicted RBP10.64□□□□□ -0.71
LINC00641-202ENST00000555688 LHX6Q9UPM6 363 aa10.64□□□□□ -0.71
LINC00641-202ENST00000555688 PSDA5PKW4 1024 aaPredicted RBP10.63□□□□□ -0.71
LINC00641-202ENST00000555688 AMHR2Q16671 573 aa10.63□□□□□ -0.71
LINC00641-202ENST00000555688 MRS2Q9HD23 443 aa10.63□□□□□ -0.71
LINC00641-202ENST00000555688 ERVK-7P63135 1459 aa10.63□□□□□ -0.71
LINC00641-202ENST00000555688 ADGRB1O14514 1584 aa10.63□□□□□ -0.71
LINC00641-202ENST00000555688 TMEM131LA2VDJ0 1609 aa10.63□□□□□ -0.71
LINC00641-202ENST00000555688 ZFYVE9O95405 1425 aa10.62□□□□□ -0.71
LINC00641-202ENST00000555688 HOXB1P14653 301 aaPredicted RBP10.62□□□□□ -0.71
LINC00641-202ENST00000555688 CLTCQ00610 1675 aaKnown RBP10.62□□□□□ -0.71
LINC00641-202ENST00000555688 ADAM33Q9BZ11 813 aa10.62□□□□□ -0.71
LINC00641-202ENST00000555688 KDM4CQ9H3R0 1056 aa10.62□□□□□ -0.71
LINC00641-202ENST00000555688 MYO5BQ9ULV0 1848 aa10.62□□□□□ -0.71
LINC00641-202ENST00000555688 EIF3AQ14152 1382 aaKnown RBP10.62□□□□□ -0.71
LINC00641-202ENST00000555688 PANK3Q9H999 370 aa10.62□□□□□ -0.71
LINC00641-202ENST00000555688 DAXXQ9UER7 740 aaPredicted RBP10.62□□□□□ -0.71
LINC00641-202ENST00000555688 KTN1Q86UP2 1357 aaKnown RBP10.61□□□□□ -0.71
LINC00641-202ENST00000555688 MYO3AQ8NEV4 1616 aa10.61□□□□□ -0.71
LINC00641-202ENST00000555688 MLECQ14165 292 aa10.6□□□□□ -0.71
LINC00641-202ENST00000555688 RALBP1Q15311 655 aa10.6□□□□□ -0.71
LINC00641-202ENST00000555688 PPP4R3BQ5MIZ7 849 aa10.6□□□□□ -0.71
LINC00641-202ENST00000555688 NUTM2DQ5VT03 806 aaPredicted RBP10.6□□□□□ -0.71
LINC00641-202ENST00000555688 SPATA31D1Q6ZQQ2 1576 aa10.6□□□□□ -0.71
LINC00641-202ENST00000555688 PARD3Q8TEW0 1356 aa10.6□□□□□ -0.71
LINC00641-202ENST00000555688 CNGB1Q14028 1251 aaPredicted RBP10.6□□□□□ -0.71
LINC00641-202ENST00000555688 CDCA8Q53HL2 280 aa10.6□□□□□ -0.71
LINC00641-202ENST00000555688 TMEM132EQ6IEE7 984 aa10.6□□□□□ -0.71
LINC00641-202ENST00000555688 SBNO2Q9Y2G9 1366 aa10.59□□□□□ -0.71
LINC00641-202ENST00000555688 HNRNPUQ00839 825 aaKnown RBP eCLIP10.59□□□□□ -0.71
LINC00641-202ENST00000555688 FAM9BQ8IZU0 186 aa10.59□□□□□ -0.71
LINC00641-202ENST00000555688 RBM27Q9P2N5 1060 aaKnown RBP10.59□□□□□ -0.71
LINC00641-202ENST00000555688 PNISRQ8TF01 805 aaKnown RBP10.58□□□□□ -0.72
LINC00641-202ENST00000555688 ZMYM3Q14202 1370 aa10.58□□□□□ -0.72
LINC00641-202ENST00000555688 MYBBP1AQ9BQG0 1328 aaKnown RBP10.58□□□□□ -0.72
LINC00641-202ENST00000555688 MYOM1P52179 1685 aa10.57□□□□□ -0.72
LINC00641-202ENST00000555688 POTEGQ6S5H5 508 aa10.57□□□□□ -0.72
LINC00641-202ENST00000555688 BCL2L12Q9HB09 334 aa10.57□□□□□ -0.72
LINC00641-202ENST00000555688 TRAK1Q9UPV9 953 aa10.57□□□□□ -0.72
LINC00641-202ENST00000555688 CENPJQ9HC77 1338 aaPredicted RBP10.57□□□□□ -0.72
LINC00641-202ENST00000555688 BRD4O60885 1362 aaPredicted RBP10.56□□□□□ -0.72
LINC00641-202ENST00000555688 A2ML1A8K2U0 1454 aa10.56□□□□□ -0.72
LINC00641-202ENST00000555688 KDM5AP29375 1690 aaKnown RBP10.55□□□□□ -0.72
LINC00641-202ENST00000555688 PARP9Q8IXQ6 854 aa10.55□□□□□ -0.72
LINC00641-202ENST00000555688 TTC13Q8NBP0 860 aa10.55□□□□□ -0.72
LINC00641-202ENST00000555688 ASXL1Q8IXJ9 1541 aa10.55□□□□□ -0.72
LINC00641-202ENST00000555688 PADI6Q6TGC4 694 aa10.54□□□□□ -0.72
LINC00641-202ENST00000555688 TMC1Q8TDI8 760 aa10.54□□□□□ -0.72
LINC00641-202ENST00000555688 PRSS12P56730 875 aa10.54□□□□□ -0.72
LINC00641-202ENST00000555688 CC2D1BQ5T0F9 858 aaKnown RBP10.54□□□□□ -0.72
LINC00641-202ENST00000555688 LRPPRCP42704 1394 aaKnown RBP10.54□□□□□ -0.72
LINC00641-202ENST00000555688 ARHGEF28Q8N1W1 1705 aaKnown RBP10.53□□□□□ -0.72
LINC00641-202ENST00000555688 QRICH2Q9H0J4 1663 aa10.53□□□□□ -0.72
LINC00641-202ENST00000555688 OATP04181 439 aa10.53□□□□□ -0.72
LINC00641-202ENST00000555688 NLRP13Q86W25 1043 aa10.53□□□□□ -0.72
LINC00641-202ENST00000555688 IL27Q8NEV9 243 aa10.52□□□□□ -0.72
LINC00641-202ENST00000555688 CARD14Q9BXL6 1004 aa10.52□□□□□ -0.72
LINC00641-202ENST00000555688 ZBED9Q6R2W3 1325 aa10.52□□□□□ -0.73
LINC00641-202ENST00000555688 NPC1L1Q9UHC9 1359 aa10.52□□□□□ -0.73
LINC00641-202ENST00000555688 ALKQ9UM73 1620 aa10.52□□□□□ -0.73
LINC00641-202ENST00000555688 PTPREP23469 700 aa10.52□□□□□ -0.73
LINC00641-202ENST00000555688 TTLL12Q14166 644 aaPredicted RBP10.52□□□□□ -0.73
LINC00641-202ENST00000555688 CDCA7LQ96GN5 454 aa10.52□□□□□ -0.73
LINC00641-202ENST00000555688 ESF1Q9H501 851 aaKnown RBP10.52□□□□□ -0.73
LINC00641-202ENST00000555688 KNSTRNQ9Y448 316 aa10.52□□□□□ -0.73
LINC00641-202ENST00000555688 PUS7Q96PZ0 661 aaKnown RBP10.51□□□□□ -0.73
LINC00641-202ENST00000555688 ADGRG1Q9Y653 693 aa10.51□□□□□ -0.73
LINC00641-202ENST00000555688 RIMS2Q9UQ26 1411 aa10.51□□□□□ -0.73
LINC00641-202ENST00000555688 PPP1R3GB7ZBB8 358 aa10.5□□□□□ -0.73
LINC00641-202ENST00000555688 COL9A1P20849 921 aa10.5□□□□□ -0.73
LINC00641-202ENST00000555688 METTL3Q86U44 580 aaKnown RBP10.5□□□□□ -0.73
LINC00641-202ENST00000555688 SUPT16HQ9Y5B9 1047 aaKnown RBP10.5□□□□□ -0.73
LINC00641-202ENST00000555688 YTHDC2Q9H6S0 1430 aaKnown RBP10.5□□□□□ -0.73
LINC00641-202ENST00000555688 CLCN1P35523 988 aa10.49□□□□□ -0.73
LINC00641-202ENST00000555688 DDRGK1Q96HY6 314 aa10.49□□□□□ -0.73
LINC00641-202ENST00000555688 PHOX2BQ99453 314 aa10.49□□□□□ -0.73
LINC00641-202ENST00000555688 TMUB1Q9BVT8 246 aa10.49□□□□□ -0.73
LINC00641-202ENST00000555688 FAM117AQ9C073 453 aa10.49□□□□□ -0.73
LINC00641-202ENST00000555688 PTPRMP28827 1452 aa10.49□□□□□ -0.73
LINC00641-202ENST00000555688 TNRQ92752 1358 aa10.49□□□□□ -0.73
LINC00641-202ENST00000555688 STK26Q9P289 416 aa10.49□□□□□ -0.73
LINC00641-202ENST00000555688 SETD1AO15047 1707 aaKnown RBP10.49□□□□□ -0.73
LINC00641-202ENST00000555688 TULP4Q9NRJ4 1543 aa10.49□□□□□ -0.73
LINC00641-202ENST00000555688 GIGYF2Q6Y7W6 1299 aaKnown RBP10.48□□□□□ -0.73
LINC00641-202ENST00000555688 PXYLP1Q8TE99 480 aa10.48□□□□□ -0.73
LINC00641-202ENST00000555688 REPIN1Q9BWE0 567 aaKnown RBP10.48□□□□□ -0.73
LINC00641-202ENST00000555688 SLC12A5Q9H2X9 1139 aa10.48□□□□□ -0.73
LINC00641-202ENST00000555688 PPP2R1AP30153 589 aa10.47□□□□□ -0.73
LINC00641-202ENST00000555688 FAM161AQ3B820 660 aa10.47□□□□□ -0.73
LINC00641-202ENST00000555688 GPCPD1Q9NPB8 672 aa10.47□□□□□ -0.73
LINC00641-202ENST00000555688 EVC2Q86UK5 1308 aa10.47□□□□□ -0.73
LINC00641-202ENST00000555688 NRXN3Q9Y4C0 1643 aa10.47□□□□□ -0.73
LINC00641-202ENST00000555688 UBR1Q8IWV7 1749 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms