RNA–Protein interactions for RNA: ENST00000555617.5

ABCD4-222, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-222ENST00000555617 USP19O94966 1318 aa18.01■□□□□ 0.47
ABCD4-222ENST00000555617 KIF1BO60333 1816 aa18■□□□□ 0.47
ABCD4-222ENST00000555617 BCL9O00512 1426 aa18■□□□□ 0.47
ABCD4-222ENST00000555617 FOXN1O15353 648 aa18■□□□□ 0.47
ABCD4-222ENST00000555617 RGS19P49795 217 aa18■□□□□ 0.47
ABCD4-222ENST00000555617 EVA1CP58658 441 aa18■□□□□ 0.47
ABCD4-222ENST00000555617 LRRC4BQ9NT99 713 aa18■□□□□ 0.47
ABCD4-222ENST00000555617 SLC16A10Q8TF71 515 aa17.99■□□□□ 0.47
ABCD4-222ENST00000555617 NHSQ6T4R5 1651 aa17.99■□□□□ 0.47
ABCD4-222ENST00000555617 PPLO60437 1756 aa17.99■□□□□ 0.47
ABCD4-222ENST00000555617 AKT1S1Q96B36 256 aa17.98■□□□□ 0.47
ABCD4-222ENST00000555617 THRAP3Q9Y2W1 955 aaKnown RBP17.98■□□□□ 0.47
ABCD4-222ENST00000555617 FSTL1Q12841 308 aa17.97■□□□□ 0.47
ABCD4-222ENST00000555617 BTAF1O14981 1849 aa17.96■□□□□ 0.47
ABCD4-222ENST00000555617 COL5A2P05997 1499 aaPredicted RBP17.95■□□□□ 0.46
ABCD4-222ENST00000555617 DDB1Q16531 1140 aa17.94■□□□□ 0.46
ABCD4-222ENST00000555617 ACIN1Q9UKV3 1341 aaKnown RBP17.94■□□□□ 0.46
ABCD4-222ENST00000555617 PRDM10Q9NQV6 1147 aa17.92■□□□□ 0.46
ABCD4-222ENST00000555617 VGFO15240 615 aaPredicted RBP17.9■□□□□ 0.46
ABCD4-222ENST00000555617 ABCC11Q96J66 1382 aa17.9■□□□□ 0.46
ABCD4-222ENST00000555617 CRB1P82279 1406 aa17.89■□□□□ 0.45
ABCD4-222ENST00000555617 NUTM2GQ5VZR2 741 aa17.88■□□□□ 0.45
ABCD4-222ENST00000555617 MSL1Q68DK7 614 aa17.88■□□□□ 0.45
ABCD4-222ENST00000555617 TMEM132EQ6IEE7 984 aa17.88■□□□□ 0.45
ABCD4-222ENST00000555617 PAK3O75914 559 aaPredicted RBP17.86■□□□□ 0.45
ABCD4-222ENST00000555617 CD2APQ9Y5K6 639 aa17.86■□□□□ 0.45
ABCD4-222ENST00000555617 IGSF1Q8N6C5 1336 aa17.86■□□□□ 0.45
ABCD4-222ENST00000555617 GPRASP1Q5JY77 1395 aa17.86■□□□□ 0.45
ABCD4-222ENST00000555617 CCDC85CA6NKD9 419 aa17.85■□□□□ 0.45
ABCD4-222ENST00000555617 NUP155O75694 1391 aa17.85■□□□□ 0.45
ABCD4-222ENST00000555617 KCPQ6ZWJ8 1503 aa17.85■□□□□ 0.45
ABCD4-222ENST00000555617 ANKARQ7Z5J8 1434 aa17.85■□□□□ 0.45
ABCD4-222ENST00000555617 C16orf71Q8IYS4 520 aaPredicted RBP17.85■□□□□ 0.45
ABCD4-222ENST00000555617 PKD1L3Q7Z443 1732 aa17.84■□□□□ 0.45
ABCD4-222ENST00000555617 PRR36Q9H6K5 1346 aa17.84■□□□□ 0.45
ABCD4-222ENST00000555617 KCNQ4P56696 695 aa17.84■□□□□ 0.45
ABCD4-222ENST00000555617 VPS8Q8N3P4 1428 aa17.83■□□□□ 0.45
ABCD4-222ENST00000555617 ACSBG1Q96GR2 724 aa17.83■□□□□ 0.44
ABCD4-222ENST00000555617 QRICH2Q9H0J4 1663 aa17.82■□□□□ 0.44
ABCD4-222ENST00000555617 C10orf71Q711Q0 1435 aa17.81■□□□□ 0.44
ABCD4-222ENST00000555617 CPDO75976 1380 aa17.8■□□□□ 0.44
ABCD4-222ENST00000555617 ADGRF5Q8IZF2 1346 aa17.8■□□□□ 0.44
ABCD4-222ENST00000555617 LBX1P52954 281 aa17.8■□□□□ 0.44
ABCD4-222ENST00000555617 TNRC6CQ9HCJ0 1690 aaKnown RBP17.8■□□□□ 0.44
ABCD4-222ENST00000555617 YTHDC2Q9H6S0 1430 aaKnown RBP17.8■□□□□ 0.44
ABCD4-222ENST00000555617 TRPM1Q7Z4N2 1603 aa17.8■□□□□ 0.44
ABCD4-222ENST00000555617 TFCP2L1Q9NZI6 479 aa17.79■□□□□ 0.44
ABCD4-222ENST00000555617 PIK3C2AO00443 1686 aa17.79■□□□□ 0.44
ABCD4-222ENST00000555617 KAT6BQ8WYB5 2073 aa17.79■□□□□ 0.44
ABCD4-222ENST00000555617 KIAA1551Q9HCM1 1747 aa17.78■□□□□ 0.44
ABCD4-222ENST00000555617 PXDNLA1KZ92 1463 aa17.78■□□□□ 0.44
ABCD4-222ENST00000555617 SAFB2Q14151 953 aaKnown RBP eCLIP17.78■□□□□ 0.44
ABCD4-222ENST00000555617 COL23A1Q86Y22 540 aaPredicted RBP17.78■□□□□ 0.44
ABCD4-222ENST00000555617 BRD4O60885 1362 aaPredicted RBP17.78■□□□□ 0.44
ABCD4-222ENST00000555617 SMC1BQ8NDV3 1235 aa17.77■□□□□ 0.44
ABCD4-222ENST00000555617 CTCFP49711 727 aaPredicted RBP17.76■□□□□ 0.43
ABCD4-222ENST00000555617 HIRIP3Q9BW71 556 aaPredicted RBP17.76■□□□□ 0.43
ABCD4-222ENST00000555617 RRAGCQ9HB90 399 aa17.76■□□□□ 0.43
ABCD4-222ENST00000555617 MKRN1Q9UHC7 482 aaKnown RBP17.76■□□□□ 0.43
ABCD4-222ENST00000555617 USP6P35125 1406 aa17.75■□□□□ 0.43
ABCD4-222ENST00000555617 COL18A1P39060 1754 aa17.74■□□□□ 0.43
ABCD4-222ENST00000555617 VIRMAQ69YN4 1812 aaKnown RBP17.72■□□□□ 0.43
ABCD4-222ENST00000555617 N4BP2Q86UW6 1770 aaPredicted RBP17.72■□□□□ 0.43
ABCD4-222ENST00000555617 ANKRD30BQ9BXX2 1392 aa17.71■□□□□ 0.43
ABCD4-222ENST00000555617 LY75O60449 1722 aa17.71■□□□□ 0.43
ABCD4-222ENST00000555617 RGPD5Q99666 1765 aa17.71■□□□□ 0.43
ABCD4-222ENST00000555617 MSH5O43196 834 aa17.7■□□□□ 0.42
ABCD4-222ENST00000555617 HSPA8P11142 646 aaKnown RBP17.7■□□□□ 0.42
ABCD4-222ENST00000555617 RPGRIP1LQ68CZ1 1315 aa17.7■□□□□ 0.42
ABCD4-222ENST00000555617 USP54Q70EL1 1684 aa17.69■□□□□ 0.42
ABCD4-222ENST00000555617 TOM1L2Q6ZVM7 507 aa17.69■□□□□ 0.42
ABCD4-222ENST00000555617 NGDNQ8NEJ9 315 aaKnown RBP17.69■□□□□ 0.42
ABCD4-222ENST00000555617 C9orf131Q5VYM1 1079 aa17.67■□□□□ 0.42
ABCD4-222ENST00000555617 SIRT1Q96EB6 747 aa17.67■□□□□ 0.42
ABCD4-222ENST00000555617 PRAM1Q96QH2 718 aa17.67■□□□□ 0.42
ABCD4-222ENST00000555617 ABCC6O95255 1503 aa17.66■□□□□ 0.42
ABCD4-222ENST00000555617 BRCA1P38398 1863 aaKnown RBP17.65■□□□□ 0.42
ABCD4-222ENST00000555617 SLC27A3Q5K4L6 730 aa17.64■□□□□ 0.41
ABCD4-222ENST00000555617 SMIM5Q71RC9 77 aa17.64■□□□□ 0.41
ABCD4-222ENST00000555617 WBP1LQ9NX94 342 aa17.64■□□□□ 0.41
ABCD4-222ENST00000555617 PLEKHG2Q9H7P9 1386 aa17.64■□□□□ 0.41
ABCD4-222ENST00000555617 AIDAQ96BJ3 306 aa17.63■□□□□ 0.41
ABCD4-222ENST00000555617 CFAP44Q96MT7 982 aa17.63■□□□□ 0.41
ABCD4-222ENST00000555617 KIF13BQ9NQT8 1826 aa17.63■□□□□ 0.41
ABCD4-222ENST00000555617 PIK3C2GO75747 1445 aa17.63■□□□□ 0.41
ABCD4-222ENST00000555617 SBF1O95248 1867 aa17.63■□□□□ 0.41
ABCD4-222ENST00000555617 ZBTB7CA1YPR0 619 aa17.62■□□□□ 0.41
ABCD4-222ENST00000555617 ARHGAP27Q6ZUM4 889 aa17.62■□□□□ 0.41
ABCD4-222ENST00000555617 AXIN2Q9Y2T1 843 aa17.62■□□□□ 0.41
ABCD4-222ENST00000555617 KDM2BQ8NHM5 1336 aa17.62■□□□□ 0.41
ABCD4-222ENST00000555617 CNTNAP1P78357 1384 aa17.62■□□□□ 0.41
ABCD4-222ENST00000555617 TOGARAM1Q9Y4F4 1720 aa17.61■□□□□ 0.41
ABCD4-222ENST00000555617 EXOC5O00471 708 aa17.61■□□□□ 0.41
ABCD4-222ENST00000555617 PRPF38BQ5VTL8 546 aaKnown RBP17.61■□□□□ 0.41
ABCD4-222ENST00000555617 CDCA7Q9BWT1 371 aaPredicted RBP17.61■□□□□ 0.41
ABCD4-222ENST00000555617 WDR17Q8IZU2 1322 aa17.61■□□□□ 0.41
ABCD4-222ENST00000555617 ITSN1Q15811 1721 aa17.61■□□□□ 0.41
ABCD4-222ENST00000555617 GCP02774 474 aa17.6■□□□□ 0.41
ABCD4-222ENST00000555617 BCS1LQ9Y276 419 aa17.59■□□□□ 0.41
ABCD4-222ENST00000555617 ERBB3P21860 1342 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms