RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 EVA1CP58658 441 aa13.41□□□□□ -0.26
PSEN1-213ENST00000555386 ZNF772Q68DY9 489 aaPredicted RBP13.41□□□□□ -0.26
PSEN1-213ENST00000555386 POTEAQ6S8J7 498 aa13.41□□□□□ -0.26
PSEN1-213ENST00000555386 MORC1Q86VD1 984 aa13.41□□□□□ -0.26
PSEN1-213ENST00000555386 QTRT2Q9H974 415 aaKnown RBP13.41□□□□□ -0.26
PSEN1-213ENST00000555386 NFAT5O94916 1531 aa13.41□□□□□ -0.26
PSEN1-213ENST00000555386 USP54Q70EL1 1684 aa13.4□□□□□ -0.26
PSEN1-213ENST00000555386 MAP2P11137 1827 aaKnown RBP13.4□□□□□ -0.26
PSEN1-213ENST00000555386 ARHGEF25Q86VW2 580 aa13.4□□□□□ -0.26
PSEN1-213ENST00000555386 UNC5CLQ8IV45 518 aa13.4□□□□□ -0.26
PSEN1-213ENST00000555386 FNBP4Q8N3X1 1017 aaPredicted RBP13.4□□□□□ -0.26
PSEN1-213ENST00000555386 ANKRD26Q9UPS8 1709 aa13.4□□□□□ -0.26
PSEN1-213ENST00000555386 AMPHP49418 695 aa13.39□□□□□ -0.27
PSEN1-213ENST00000555386 LTV1Q96GA3 475 aaPredicted RBP13.39□□□□□ -0.27
PSEN1-213ENST00000555386 AXIN2Q9Y2T1 843 aa13.39□□□□□ -0.27
PSEN1-213ENST00000555386 CPDO75976 1380 aa13.39□□□□□ -0.27
PSEN1-213ENST00000555386 NWD2Q9ULI1 1742 aa13.39□□□□□ -0.27
PSEN1-213ENST00000555386 BCL9LQ86UU0 1499 aa13.38□□□□□ -0.27
PSEN1-213ENST00000555386 PER1O15534 1290 aaPredicted RBP13.38□□□□□ -0.27
PSEN1-213ENST00000555386 AMER1Q5JTC6 1135 aaPredicted RBP13.38□□□□□ -0.27
PSEN1-213ENST00000555386 USP35Q9P2H5 1018 aa13.38□□□□□ -0.27
PSEN1-213ENST00000555386 SLIT2O94813 1529 aa13.38□□□□□ -0.27
PSEN1-213ENST00000555386 MAP3K19Q56UN5 1328 aa13.38□□□□□ -0.27
PSEN1-213ENST00000555386 CSB-PGBD3P0DP91 1061 aa13.37□□□□□ -0.27
PSEN1-213ENST00000555386 PELP1Q8IZL8 1130 aaKnown RBP13.37□□□□□ -0.27
PSEN1-213ENST00000555386 TRPC5Q9UL62 973 aaPredicted RBP13.37□□□□□ -0.27
PSEN1-213ENST00000555386 CAMTA1Q9Y6Y1 1673 aa13.37□□□□□ -0.27
PSEN1-213ENST00000555386 EMILIN1Q9Y6C2 1016 aa13.36□□□□□ -0.27
PSEN1-213ENST00000555386 COL18A1P39060 1754 aa13.36□□□□□ -0.27
PSEN1-213ENST00000555386 NRAPQ86VF7 1730 aa13.36□□□□□ -0.27
PSEN1-213ENST00000555386 A0A0G2JS52 829 aa13.36□□□□□ -0.27
PSEN1-213ENST00000555386 CCER2I3L3R5 266 aa13.36□□□□□ -0.27
PSEN1-213ENST00000555386 MYT1Q01538 1121 aa13.36□□□□□ -0.27
PSEN1-213ENST00000555386 LARP1Q6PKG0 1096 aaKnown RBP13.36□□□□□ -0.27
PSEN1-213ENST00000555386 NSD2O96028 1365 aa13.35□□□□□ -0.27
PSEN1-213ENST00000555386 AATKQ6ZMQ8 1374 aa13.35□□□□□ -0.27
PSEN1-213ENST00000555386 LMO7Q8WWI1 1683 aa13.35□□□□□ -0.27
PSEN1-213ENST00000555386 RXRBP28702 533 aa13.35□□□□□ -0.27
PSEN1-213ENST00000555386 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.34□□□□□ -0.27
PSEN1-213ENST00000555386 TOM1L2Q6ZVM7 507 aa13.34□□□□□ -0.27
PSEN1-213ENST00000555386 ATRNO75882 1429 aa13.33□□□□□ -0.27
PSEN1-213ENST00000555386 HOXC9P31274 260 aa13.33□□□□□ -0.28
PSEN1-213ENST00000555386 VPS72Q15906 364 aa13.33□□□□□ -0.28
PSEN1-213ENST00000555386 ANKRD24Q8TF21 1146 aa13.33□□□□□ -0.28
PSEN1-213ENST00000555386 IP6K1Q92551 441 aa13.33□□□□□ -0.28
PSEN1-213ENST00000555386 GJD4Q96KN9 370 aaPredicted RBP13.33□□□□□ -0.28
PSEN1-213ENST00000555386 PEAK1Q9H792 1746 aa13.33□□□□□ -0.28
PSEN1-213ENST00000555386 COL5A2P05997 1499 aaPredicted RBP13.32□□□□□ -0.28
PSEN1-213ENST00000555386 RBM6P78332 1123 aaKnown RBP13.32□□□□□ -0.28
PSEN1-213ENST00000555386 HSP90AB2PQ58FF8 381 aa13.32□□□□□ -0.28
PSEN1-213ENST00000555386 ILDR2Q71H61 639 aa13.32□□□□□ -0.28
PSEN1-213ENST00000555386 NLRP2Q9NX02 1062 aa13.32□□□□□ -0.28
PSEN1-213ENST00000555386 POLKQ9UBT6 870 aa13.32□□□□□ -0.28
PSEN1-213ENST00000555386 RGPD2P0DJD1 1756 aa13.32□□□□□ -0.28
PSEN1-213ENST00000555386 ANP32CO43423 234 aa13.31□□□□□ -0.28
PSEN1-213ENST00000555386 FAM98CQ17RN3 349 aaKnown RBP13.31□□□□□ -0.28
PSEN1-213ENST00000555386 SPATA31A5Q5VU36 1347 aa13.3□□□□□ -0.28
PSEN1-213ENST00000555386 SPATA31A7Q8IWB4 1347 aa13.3□□□□□ -0.28
PSEN1-213ENST00000555386 GLI3P10071 1580 aa13.3□□□□□ -0.28
PSEN1-213ENST00000555386 WDR17Q8IZU2 1322 aa13.29□□□□□ -0.28
PSEN1-213ENST00000555386 FLT4P35916 1363 aa13.29□□□□□ -0.28
PSEN1-213ENST00000555386 MTHFSP49914 203 aa13.29□□□□□ -0.28
PSEN1-213ENST00000555386 USHBP1Q8N6Y0 703 aa13.29□□□□□ -0.28
PSEN1-213ENST00000555386 ERBB3P21860 1342 aa13.28□□□□□ -0.28
PSEN1-213ENST00000555386 SPATA31A1Q5TZJ5 1347 aa13.28□□□□□ -0.28
PSEN1-213ENST00000555386 BLMP54132 1417 aaPredicted RBP13.28□□□□□ -0.28
PSEN1-213ENST00000555386 CRB1P82279 1406 aa13.28□□□□□ -0.28
PSEN1-213ENST00000555386 RTL1A6NKG5 1358 aa13.27□□□□□ -0.28
PSEN1-213ENST00000555386 NPC1L1Q9UHC9 1359 aa13.27□□□□□ -0.28
PSEN1-213ENST00000555386 SMG6Q86US8 1419 aaKnown RBP13.27□□□□□ -0.28
PSEN1-213ENST00000555386 SLC4A2P04920 1241 aa13.27□□□□□ -0.29
PSEN1-213ENST00000555386 TCP11L2Q8N4U5 519 aa13.27□□□□□ -0.29
PSEN1-213ENST00000555386 KAT6BQ8WYB5 2073 aa13.26□□□□□ -0.29
PSEN1-213ENST00000555386 BRWD3Q6RI45 1802 aa13.26□□□□□ -0.29
PSEN1-213ENST00000555386 ABCC6O95255 1503 aa13.26□□□□□ -0.29
PSEN1-213ENST00000555386 SEPT12Q8IYM1 358 aa13.26□□□□□ -0.29
PSEN1-213ENST00000555386 INSRP06213 1382 aa13.26□□□□□ -0.29
PSEN1-213ENST00000555386 RGS12O14924 1447 aa13.26□□□□□ -0.29
PSEN1-213ENST00000555386 ATXN8OSP0DMR3 200 aa13.25□□□□□ -0.29
PSEN1-213ENST00000555386 CARD10Q9BWT7 1032 aa13.25□□□□□ -0.29
PSEN1-213ENST00000555386 EP400Q96L91 3159 aa13.25□□□□□ -0.29
PSEN1-213ENST00000555386 PPP2R1AP30153 589 aa13.24□□□□□ -0.29
PSEN1-213ENST00000555386 EIF4A2Q14240 407 aaKnown RBP13.24□□□□□ -0.29
PSEN1-213ENST00000555386 NBPF6Q5VWK0 638 aa13.24□□□□□ -0.29
PSEN1-213ENST00000555386 NBPF4Q96M43 638 aa13.24□□□□□ -0.29
PSEN1-213ENST00000555386 FAM182BQ5T319 152 aa13.23□□□□□ -0.29
PSEN1-213ENST00000555386 KIF24Q5T7B8 1368 aa13.23□□□□□ -0.29
PSEN1-213ENST00000555386 FAM208AQ9UK61 1670 aaKnown RBP13.23□□□□□ -0.29
PSEN1-213ENST00000555386 CDK12Q9NYV4 1490 aaPredicted RBP13.22□□□□□ -0.29
PSEN1-213ENST00000555386 THRAP3Q9Y2W1 955 aaKnown RBP13.22□□□□□ -0.29
PSEN1-213ENST00000555386 WNK3Q9BYP7 1800 aa13.21□□□□□ -0.29
PSEN1-213ENST00000555386 PARD3Q8TEW0 1356 aa13.21□□□□□ -0.29
PSEN1-213ENST00000555386 U2SURPO15042 1029 aaKnown RBP13.21□□□□□ -0.3
PSEN1-213ENST00000555386 MYCNP04198 464 aaPredicted RBP13.21□□□□□ -0.3
PSEN1-213ENST00000555386 CFAP53Q96M91 514 aa13.21□□□□□ -0.3
PSEN1-213ENST00000555386 EYA1Q99502 592 aa13.21□□□□□ -0.3
PSEN1-213ENST00000555386 DIAPH1O60610 1272 aaKnown RBP13.2□□□□□ -0.3
PSEN1-213ENST00000555386 IL2RBP14784 551 aa13.2□□□□□ -0.3
PSEN1-213ENST00000555386 PDE3BQ13370 1112 aa13.2□□□□□ -0.3
PSEN1-213ENST00000555386 RALBP1Q15311 655 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms