RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 WASHC2AQ641Q2 1341 aa28.19■■■□□ 2.1
FOXN3-209ENST00000555353 RGS12O14924 1447 aa28.18■■■□□ 2.1
FOXN3-209ENST00000555353 COL5A2P05997 1499 aaPredicted RBP28.18■■■□□ 2.1
FOXN3-209ENST00000555353 RGPD5Q99666 1765 aa28.18■■■□□ 2.1
FOXN3-209ENST00000555353 ABCC6O95255 1503 aa28.17■■■□□ 2.1
FOXN3-209ENST00000555353 SPATA31A5Q5VU36 1347 aa28.16■■■□□ 2.1
FOXN3-209ENST00000555353 SPATA31A7Q8IWB4 1347 aa28.16■■■□□ 2.1
FOXN3-209ENST00000555353 AXIN2Q9Y2T1 843 aa28.16■■■□□ 2.1
FOXN3-209ENST00000555353 LARP1Q6PKG0 1096 aaKnown RBP28.14■■■□□ 2.1
FOXN3-209ENST00000555353 KNSTRNQ9Y448 316 aa28.14■■■□□ 2.1
FOXN3-209ENST00000555353 SOCS7O14512 581 aa28.12■■■□□ 2.09
FOXN3-209ENST00000555353 ANKRD26Q9UPS8 1709 aa28.12■■■□□ 2.09
FOXN3-209ENST00000555353 SPATA31A1Q5TZJ5 1347 aa28.12■■■□□ 2.09
FOXN3-209ENST00000555353 USP35Q9P2H5 1018 aa28.11■■■□□ 2.09
FOXN3-209ENST00000555353 A0A0G2JS52 829 aa28.1■■■□□ 2.09
FOXN3-209ENST00000555353 FBLN1P23142 703 aa28.1■■■□□ 2.09
FOXN3-209ENST00000555353 MYT1Q01538 1121 aa28.1■■■□□ 2.09
FOXN3-209ENST00000555353 FAM98CQ17RN3 349 aaKnown RBP28.1■■■□□ 2.09
FOXN3-209ENST00000555353 MAP3K19Q56UN5 1328 aa28.1■■■□□ 2.09
FOXN3-209ENST00000555353 CSB-PGBD3P0DP91 1061 aa28.09■■■□□ 2.09
FOXN3-209ENST00000555353 AMPHP49418 695 aa28.09■■■□□ 2.09
FOXN3-209ENST00000555353 NSD2O96028 1365 aa28.09■■■□□ 2.09
FOXN3-209ENST00000555353 CRB1P82279 1406 aa28.09■■■□□ 2.09
FOXN3-209ENST00000555353 TOM1L2Q6ZVM7 507 aa28.08■■■□□ 2.09
FOXN3-209ENST00000555353 WDR17Q8IZU2 1322 aa28.08■■■□□ 2.09
FOXN3-209ENST00000555353 ONECUT3O60422 494 aaPredicted RBP28.07■■■□□ 2.08
FOXN3-209ENST00000555353 RRS1Q15050 365 aaKnown RBP28.07■■■□□ 2.08
FOXN3-209ENST00000555353 SEPT12Q8IYM1 358 aa28.07■■■□□ 2.08
FOXN3-209ENST00000555353 IP6K1Q92551 441 aa28.07■■■□□ 2.08
FOXN3-209ENST00000555353 BLMP54132 1417 aaPredicted RBP28.06■■■□□ 2.08
FOXN3-209ENST00000555353 TCP11L2Q8N4U5 519 aa28.06■■■□□ 2.08
FOXN3-209ENST00000555353 BRWD3Q6RI45 1802 aa28.04■■■□□ 2.08
FOXN3-209ENST00000555353 RTL1A6NKG5 1358 aa28.04■■■□□ 2.08
FOXN3-209ENST00000555353 ERBB3P21860 1342 aa28.04■■■□□ 2.08
FOXN3-209ENST00000555353 HOXC9P31274 260 aa28.03■■■□□ 2.08
FOXN3-209ENST00000555353 THRAP3Q9Y2W1 955 aaKnown RBP28.03■■■□□ 2.08
FOXN3-209ENST00000555353 MAP2P11137 1827 aaKnown RBP28.03■■■□□ 2.08
FOXN3-209ENST00000555353 BARGINQ6ZT62 677 aa28.02■■■□□ 2.08
FOXN3-209ENST00000555353 ANKRD24Q8TF21 1146 aa28.02■■■□□ 2.08
FOXN3-209ENST00000555353 PER1O15534 1290 aaPredicted RBP28.01■■■□□ 2.07
FOXN3-209ENST00000555353 TNNT2P45379 298 aaPredicted RBP28.01■■■□□ 2.07
FOXN3-209ENST00000555353 THSD7AQ9UPZ6 1657 aa28.01■■■□□ 2.07
FOXN3-209ENST00000555353 AMER1Q5JTC6 1135 aaPredicted RBP28■■■□□ 2.07
FOXN3-209ENST00000555353 MORC1Q86VD1 984 aa27.99■■■□□ 2.07
FOXN3-209ENST00000555353 LTV1Q96GA3 475 aaPredicted RBP27.99■■■□□ 2.07
FOXN3-209ENST00000555353 KIF24Q5T7B8 1368 aa27.99■■■□□ 2.07
FOXN3-209ENST00000555353 CARD10Q9BWT7 1032 aa27.99■■■□□ 2.07
FOXN3-209ENST00000555353 NLRP2Q9NX02 1062 aa27.99■■■□□ 2.07
FOXN3-209ENST00000555353 FLT4P35916 1363 aa27.98■■■□□ 2.07
FOXN3-209ENST00000555353 PPM1GO15355 546 aaPredicted RBP27.98■■■□□ 2.07
FOXN3-209ENST00000555353 PEAK1Q9H792 1746 aa27.97■■■□□ 2.07
FOXN3-209ENST00000555353 FAM208AQ9UK61 1670 aaKnown RBP27.97■■■□□ 2.07
FOXN3-209ENST00000555353 EMILIN1Q9Y6C2 1016 aa27.97■■■□□ 2.07
FOXN3-209ENST00000555353 KRT27Q7Z3Y8 459 aa27.96■■■□□ 2.07
FOXN3-209ENST00000555353 SMG6Q86US8 1419 aaKnown RBP27.94■■■□□ 2.06
FOXN3-209ENST00000555353 WNK3Q9BYP7 1800 aa27.94■■■□□ 2.06
FOXN3-209ENST00000555353 CC2D1BQ5T0F9 858 aaKnown RBP27.94■■■□□ 2.06
FOXN3-209ENST00000555353 INSRP06213 1382 aa27.93■■■□□ 2.06
FOXN3-209ENST00000555353 HSP90AB2PQ58FF8 381 aa27.93■■■□□ 2.06
FOXN3-209ENST00000555353 POLKQ9UBT6 870 aa27.93■■■□□ 2.06
FOXN3-209ENST00000555353 PARP4Q9UKK3 1724 aaKnown RBP27.91■■■□□ 2.06
FOXN3-209ENST00000555353 CDCA7Q9BWT1 371 aaPredicted RBP27.91■■■□□ 2.06
FOXN3-209ENST00000555353 NPC1L1Q9UHC9 1359 aa27.91■■■□□ 2.06
FOXN3-209ENST00000555353 EP400Q96L91 3159 aa27.91■■■□□ 2.06
FOXN3-209ENST00000555353 RGPD2P0DJD1 1756 aa27.89■■■□□ 2.06
FOXN3-209ENST00000555353 CNGB1Q14028 1251 aaPredicted RBP27.89■■■□□ 2.05
FOXN3-209ENST00000555353 PDE3BQ13370 1112 aa27.88■■■□□ 2.05
FOXN3-209ENST00000555353 UPF1Q92900 1129 aaKnown RBP eCLIP27.86■■■□□ 2.05
FOXN3-209ENST00000555353 DDB1Q16531 1140 aa27.86■■■□□ 2.05
FOXN3-209ENST00000555353 LRRC37A3O60309 1634 aa27.85■■■□□ 2.05
FOXN3-209ENST00000555353 DISP2A7MBM2 1401 aa27.84■■■□□ 2.05
FOXN3-209ENST00000555353 IL2RBP14784 551 aa27.83■■■□□ 2.05
FOXN3-209ENST00000555353 DDX10Q13206 875 aaKnown RBP27.83■■■□□ 2.05
FOXN3-209ENST00000555353 NBPF6Q5VWK0 638 aa27.82■■■□□ 2.04
FOXN3-209ENST00000555353 NBPF4Q96M43 638 aa27.82■■■□□ 2.04
FOXN3-209ENST00000555353 FAM182BQ5T319 152 aa27.82■■■□□ 2.04
FOXN3-209ENST00000555353 EXOC5O00471 708 aa27.79■■■□□ 2.04
FOXN3-209ENST00000555353 USHBP1Q8N6Y0 703 aa27.78■■■□□ 2.04
FOXN3-209ENST00000555353 FAM196AQ6ZSG2 479 aa27.77■■■□□ 2.04
FOXN3-209ENST00000555353 TNS2Q63HR2 1409 aa27.76■■■□□ 2.03
FOXN3-209ENST00000555353 MTHFSP49914 203 aa27.76■■■□□ 2.03
FOXN3-209ENST00000555353 EIF4A2Q14240 407 aaKnown RBP27.76■■■□□ 2.03
FOXN3-209ENST00000555353 CCDC125Q86Z20 511 aa27.76■■■□□ 2.03
FOXN3-209ENST00000555353 RAPGEF4Q8WZA2 1011 aa27.74■■■□□ 2.03
FOXN3-209ENST00000555353 OVOS2A0A0G2JMS6 1433 aa27.73■■■□□ 2.03
FOXN3-209ENST00000555353 EYA1Q99502 592 aa27.73■■■□□ 2.03
FOXN3-209ENST00000555353 SF3B2Q13435 895 aaKnown RBP27.72■■■□□ 2.03
FOXN3-209ENST00000555353 MEGF6O75095 1541 aa27.72■■■□□ 2.03
FOXN3-209ENST00000555353 MARCH10Q8NA82 808 aaPredicted RBP27.71■■■□□ 2.03
FOXN3-209ENST00000555353 TATP17735 454 aaPredicted RBP27.69■■■□□ 2.02
FOXN3-209ENST00000555353 RGPD1P0DJD0 1748 aa27.69■■■□□ 2.02
FOXN3-209ENST00000555353 DIEXFQ68CQ4 756 aaKnown RBP27.69■■■□□ 2.02
FOXN3-209ENST00000555353 NCAPD2Q15021 1401 aa27.68■■■□□ 2.02
FOXN3-209ENST00000555353 ZCRB1Q8TBF4 217 aaKnown RBP27.67■■■□□ 2.02
FOXN3-209ENST00000555353 TRIM37O94972 964 aa27.66■■■□□ 2.02
FOXN3-209ENST00000555353 IGSF1Q8N6C5 1336 aa27.65■■■□□ 2.02
FOXN3-209ENST00000555353 DDX54Q8TDD1 881 aaKnown RBP27.65■■■□□ 2.02
FOXN3-209ENST00000555353 KAT6BQ8WYB5 2073 aa27.65■■■□□ 2.02
FOXN3-209ENST00000555353 SBF2Q86WG5 1849 aa27.64■■■□□ 2.02
FOXN3-209ENST00000555353 PPP2R1AP30153 589 aa27.64■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms