RNA–Protein interactions for RNA: ENST00000555244.1

CPSF2-204, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 3

Gene CPSF2, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-204ENST00000555244 TSC1Q92574 1164 aa6.79□□□□□ -1.32
CPSF2-204ENST00000555244 FCF1Q9Y324 198 aaKnown RBP6.79□□□□□ -1.32
CPSF2-204ENST00000555244 SALL2Q9Y467 1007 aaPredicted RBP6.79□□□□□ -1.32
CPSF2-204ENST00000555244 MAGI3Q5TCQ9 1506 aa6.78□□□□□ -1.32
CPSF2-204ENST00000555244 A6NJR5 290 aa6.78□□□□□ -1.32
CPSF2-204ENST00000555244 SOCS7O14512 581 aa6.78□□□□□ -1.32
CPSF2-204ENST00000555244 TRAF7Q6Q0C0 670 aa6.78□□□□□ -1.32
CPSF2-204ENST00000555244 ZNF598Q86UK7 904 aaKnown RBP6.78□□□□□ -1.32
CPSF2-204ENST00000555244 RETREG3Q86VR2 466 aa6.78□□□□□ -1.32
CPSF2-204ENST00000555244 MAP3K4Q9Y6R4 1608 aa6.78□□□□□ -1.32
CPSF2-204ENST00000555244 PPRC1Q5VV67 1664 aaKnown RBP6.77□□□□□ -1.32
CPSF2-204ENST00000555244 TTBK1Q5TCY1 1321 aaPredicted RBP6.77□□□□□ -1.32
CPSF2-204ENST00000555244 TNFRSF10AO00220 468 aa6.77□□□□□ -1.33
CPSF2-204ENST00000555244 USP17L8P0C7I0 530 aa6.77□□□□□ -1.33
CPSF2-204ENST00000555244 TRIM67Q6ZTA4 783 aa6.77□□□□□ -1.33
CPSF2-204ENST00000555244 PRR7Q8TB68 274 aa6.77□□□□□ -1.33
CPSF2-204ENST00000555244 SNRKQ9NRH2 765 aa6.77□□□□□ -1.33
CPSF2-204ENST00000555244 NUP153P49790 1475 aaKnown RBP6.77□□□□□ -1.33
CPSF2-204ENST00000555244 TEX14Q8IWB6 1497 aa6.77□□□□□ -1.33
CPSF2-204ENST00000555244 LCE2BO14633 110 aa6.76□□□□□ -1.33
CPSF2-204ENST00000555244 FOXC1Q12948 553 aa6.76□□□□□ -1.33
CPSF2-204ENST00000555244 WWC1Q8IX03 1113 aa6.76□□□□□ -1.33
CPSF2-204ENST00000555244 SYMPKQ92797 1274 aaKnown RBP6.76□□□□□ -1.33
CPSF2-204ENST00000555244 PHLDB1Q86UU1 1377 aa6.76□□□□□ -1.33
CPSF2-204ENST00000555244 RAPGEF6Q8TEU7 1601 aa6.76□□□□□ -1.33
CPSF2-204ENST00000555244 FHOD3Q2V2M9 1422 aa6.76□□□□□ -1.33
CPSF2-204ENST00000555244 CD109Q6YHK3 1445 aa6.76□□□□□ -1.33
CPSF2-204ENST00000555244 COL17A1Q9UMD9 1497 aaPredicted RBP6.75□□□□□ -1.33
CPSF2-204ENST00000555244 CFAP99D6REC4 459 aa6.75□□□□□ -1.33
CPSF2-204ENST00000555244 DESI1Q6ICB0 168 aa6.75□□□□□ -1.33
CPSF2-204ENST00000555244 MTMR14Q8NCE2 650 aa6.75□□□□□ -1.33
CPSF2-204ENST00000555244 CLUAP1Q96AJ1 413 aa6.75□□□□□ -1.33
CPSF2-204ENST00000555244 USB1Q9BQ65 265 aaKnown RBP6.75□□□□□ -1.33
CPSF2-204ENST00000555244 CFAP43Q8NDM7 1665 aa6.74□□□□□ -1.33
CPSF2-204ENST00000555244 ARHGAP35Q9NRY4 1499 aa6.74□□□□□ -1.33
CPSF2-204ENST00000555244 CTDSPL2Q05D32 466 aa6.74□□□□□ -1.33
CPSF2-204ENST00000555244 KDM6BO15054 1643 aa6.74□□□□□ -1.33
CPSF2-204ENST00000555244 FMN1Q68DA7 1419 aa6.74□□□□□ -1.33
CPSF2-204ENST00000555244 ARAP3Q8WWN8 1544 aa6.73□□□□□ -1.33
CPSF2-204ENST00000555244 ZBTB24O43167 697 aaPredicted RBP6.73□□□□□ -1.33
CPSF2-204ENST00000555244 MSS51Q4VC12 460 aa6.73□□□□□ -1.33
CPSF2-204ENST00000555244 CCDC24Q8N4L8 307 aa6.73□□□□□ -1.33
CPSF2-204ENST00000555244 COG6Q9Y2V7 657 aa6.73□□□□□ -1.33
CPSF2-204ENST00000555244 ABCA9Q8IUA7 1624 aa6.72□□□□□ -1.33
CPSF2-204ENST00000555244 PLEKHD1A6NEE1 506 aa6.72□□□□□ -1.33
CPSF2-204ENST00000555244 FAM187AA6NFU0 413 aa6.72□□□□□ -1.33
CPSF2-204ENST00000555244 GDF9O60383 454 aa6.72□□□□□ -1.33
CPSF2-204ENST00000555244 CD2BP2O95400 341 aaKnown RBP6.72□□□□□ -1.33
CPSF2-204ENST00000555244 PKDCCQ504Y2 493 aa6.72□□□□□ -1.33
CPSF2-204ENST00000555244 PROSER2Q86WR7 435 aaPredicted RBP6.72□□□□□ -1.33
CPSF2-204ENST00000555244 PNMA1Q8ND90 353 aa6.72□□□□□ -1.33
CPSF2-204ENST00000555244 NDUFB9Q9Y6M9 179 aa6.72□□□□□ -1.33
CPSF2-204ENST00000555244 TSPOAP1O95153 1857 aa6.72□□□□□ -1.33
CPSF2-204ENST00000555244 TRAK2O60296 914 aa6.71□□□□□ -1.34
CPSF2-204ENST00000555244 POM121Q96HA1 1249 aa6.71□□□□□ -1.34
CPSF2-204ENST00000555244 NEO1Q92859 1461 aa6.71□□□□□ -1.34
CPSF2-204ENST00000555244 JUNDP17535 347 aa6.7□□□□□ -1.34
CPSF2-204ENST00000555244 ABL2P42684 1182 aa6.7□□□□□ -1.34
CPSF2-204ENST00000555244 RPIAP49247 311 aa6.7□□□□□ -1.34
CPSF2-204ENST00000555244 PRR20EP86478 221 aa6.7□□□□□ -1.34
CPSF2-204ENST00000555244 PRR20CP86479 221 aa6.7□□□□□ -1.34
CPSF2-204ENST00000555244 PRR20DP86480 221 aa6.7□□□□□ -1.34
CPSF2-204ENST00000555244 PRR20BP86481 221 aa6.7□□□□□ -1.34
CPSF2-204ENST00000555244 PRR20AP86496 221 aa6.7□□□□□ -1.34
CPSF2-204ENST00000555244 LRRN4Q8WUT4 740 aa6.7□□□□□ -1.34
CPSF2-204ENST00000555244 GDPD2Q9HCC8 539 aa6.7□□□□□ -1.34
CPSF2-204ENST00000555244 MMP16P51512 607 aa6.69□□□□□ -1.34
CPSF2-204ENST00000555244 PTPRNQ16849 979 aa6.69□□□□□ -1.34
CPSF2-204ENST00000555244 LYPD8Q6UX82 237 aa6.69□□□□□ -1.34
CPSF2-204ENST00000555244 PKD2L1Q9P0L9 805 aa6.69□□□□□ -1.34
CPSF2-204ENST00000555244 CASKIN1Q8WXD9 1431 aa6.68□□□□□ -1.34
CPSF2-204ENST00000555244 FNBP4Q8N3X1 1017 aaPredicted RBP6.68□□□□□ -1.34
CPSF2-204ENST00000555244 GJD4Q96KN9 370 aaPredicted RBP6.68□□□□□ -1.34
CPSF2-204ENST00000555244 HMX1Q9NP08 348 aaPredicted RBP6.68□□□□□ -1.34
CPSF2-204ENST00000555244 TBC1D2BQ9UPU7 963 aa6.68□□□□□ -1.34
CPSF2-204ENST00000555244 ZNF330Q9Y3S2 320 aaPredicted RBP6.68□□□□□ -1.34
CPSF2-204ENST00000555244 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.67□□□□□ -1.34
CPSF2-204ENST00000555244 PER1O15534 1290 aaPredicted RBP6.67□□□□□ -1.34
CPSF2-204ENST00000555244 DGAT1O75907 488 aa6.67□□□□□ -1.34
CPSF2-204ENST00000555244 DXOO77932 396 aaKnown RBP6.67□□□□□ -1.34
CPSF2-204ENST00000555244 RANGAP1P46060 587 aaPredicted RBP6.67□□□□□ -1.34
CPSF2-204ENST00000555244 MYT1Q01538 1121 aa6.67□□□□□ -1.34
CPSF2-204ENST00000555244 CDK11AQ9UQ88 783 aaPredicted RBP6.67□□□□□ -1.34
CPSF2-204ENST00000555244 PLCH2O75038 1416 aa6.67□□□□□ -1.34
CPSF2-204ENST00000555244 TROQ12816 1431 aaPredicted RBP6.67□□□□□ -1.34
CPSF2-204ENST00000555244 HECW1Q76N89 1606 aa6.66□□□□□ -1.34
CPSF2-204ENST00000555244 ARID3CA6NKF2 412 aa6.66□□□□□ -1.34
CPSF2-204ENST00000555244 TRIM32Q13049 653 aa6.66□□□□□ -1.34
CPSF2-204ENST00000555244 NR6A1Q15406 480 aa6.66□□□□□ -1.34
CPSF2-204ENST00000555244 WASHC4Q2M389 1173 aa6.66□□□□□ -1.34
CPSF2-204ENST00000555244 ZNF787Q6DD87 383 aa6.66□□□□□ -1.34
CPSF2-204ENST00000555244 CYP4X1Q8N118 509 aa6.66□□□□□ -1.34
CPSF2-204ENST00000555244 TRIM34Q9BYJ4 488 aa6.66□□□□□ -1.34
CPSF2-204ENST00000555244 CLIP1P30622 1438 aa6.66□□□□□ -1.34
CPSF2-204ENST00000555244 CDK13Q14004 1512 aaKnown RBP6.66□□□□□ -1.34
CPSF2-204ENST00000555244 CCNYL3P0C7X3 344 aa6.65□□□□□ -1.34
CPSF2-204ENST00000555244 CTHP32929 405 aa6.65□□□□□ -1.34
CPSF2-204ENST00000555244 NUDT12Q9BQG2 462 aa6.65□□□□□ -1.34
CPSF2-204ENST00000555244 ZNF777Q9ULD5 760 aaPredicted RBP6.65□□□□□ -1.34
CPSF2-204ENST00000555244 AKNAQ7Z591 1439 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms