RNA–Protein interactions for RNA: ENST00000555241.5

SYNE2-218, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-218ENST00000555241 NME9Q86XW9 330 aa30.19■■■□□ 2.42
SYNE2-218ENST00000555241 PARP4Q9UKK3 1724 aaKnown RBP30.19■■■□□ 2.42
SYNE2-218ENST00000555241 SOX12O15370 315 aa30.18■■■□□ 2.42
SYNE2-218ENST00000555241 TCP11L2Q8N4U5 519 aa30.18■■■□□ 2.42
SYNE2-218ENST00000555241 THRAP3Q9Y2W1 955 aaKnown RBP30.18■■■□□ 2.42
SYNE2-218ENST00000555241 WNK3Q9BYP7 1800 aa30.17■■■□□ 2.42
SYNE2-218ENST00000555241 RGPD1P0DJD0 1748 aa30.17■■■□□ 2.42
SYNE2-218ENST00000555241 ZRANB1Q9UGI0 708 aa30.17■■■□□ 2.42
SYNE2-218ENST00000555241 CDCA8Q53HL2 280 aa30.16■■■□□ 2.42
SYNE2-218ENST00000555241 ANKRD36BQ8N2N9 1353 aa30.15■■■□□ 2.42
SYNE2-218ENST00000555241 OVOS2A0A0J9YW53 1432 aa30.14■■■□□ 2.42
SYNE2-218ENST00000555241 OVOS2Q6IE36 1432 aa30.14■■■□□ 2.42
SYNE2-218ENST00000555241 SF3B2Q13435 895 aaKnown RBP30.14■■■□□ 2.42
SYNE2-218ENST00000555241 AXIN2Q9Y2T1 843 aa30.14■■■□□ 2.42
SYNE2-218ENST00000555241 MYOM1P52179 1685 aa30.12■■■□□ 2.41
SYNE2-218ENST00000555241 WDR17Q8IZU2 1322 aa30.12■■■□□ 2.41
SYNE2-218ENST00000555241 TOM1L2Q6ZVM7 507 aa30.1■■■□□ 2.41
SYNE2-218ENST00000555241 FAM182BQ5T319 152 aa30.09■■■□□ 2.41
SYNE2-218ENST00000555241 TNS1Q9HBL0 1735 aaKnown RBP30.09■■■□□ 2.41
SYNE2-218ENST00000555241 KIF20BQ96Q89 1820 aa30.07■■■□□ 2.4
SYNE2-218ENST00000555241 LRRC37A3O60309 1634 aa30.07■■■□□ 2.4
SYNE2-218ENST00000555241 PDE3BQ13370 1112 aa30.06■■■□□ 2.4
SYNE2-218ENST00000555241 FAM196AQ6ZSG2 479 aa30.05■■■□□ 2.4
SYNE2-218ENST00000555241 DEFB132Q7Z7B7 95 aa30.05■■■□□ 2.4
SYNE2-218ENST00000555241 CSB-PGBD3P0DP91 1061 aa30.03■■■□□ 2.4
SYNE2-218ENST00000555241 COG3Q96JB2 828 aa30.02■■■□□ 2.4
SYNE2-218ENST00000555241 CARD10Q9BWT7 1032 aa30.02■■■□□ 2.4
SYNE2-218ENST00000555241 BAG6P46379 1132 aa30.01■■■□□ 2.39
SYNE2-218ENST00000555241 FAM208AQ9UK61 1670 aaKnown RBP29.99■■■□□ 2.39
SYNE2-218ENST00000555241 CDCA7Q9BWT1 371 aaPredicted RBP29.99■■■□□ 2.39
SYNE2-218ENST00000555241 CCDC7Q96M83 1385 aa29.99■■■□□ 2.39
SYNE2-218ENST00000555241 PEAK1Q9H792 1746 aa29.99■■■□□ 2.39
SYNE2-218ENST00000555241 ERBB3P21860 1342 aa29.98■■■□□ 2.39
SYNE2-218ENST00000555241 DISP2A7MBM2 1401 aa29.98■■■□□ 2.39
SYNE2-218ENST00000555241 EIF4G2P78344 907 aaKnown RBP eCLIP29.98■■■□□ 2.39
SYNE2-218ENST00000555241 SBF2Q86WG5 1849 aa29.98■■■□□ 2.39
SYNE2-218ENST00000555241 DDB1Q16531 1140 aa29.96■■■□□ 2.39
SYNE2-218ENST00000555241 C11orf95C9JLR9 678 aaPredicted RBP29.95■■■□□ 2.39
SYNE2-218ENST00000555241 FYB1O15117 783 aa29.95■■■□□ 2.39
SYNE2-218ENST00000555241 OVOS2A0A0G2JMS6 1433 aa29.94■■■□□ 2.38
SYNE2-218ENST00000555241 TRIM37O94972 964 aa29.93■■■□□ 2.38
SYNE2-218ENST00000555241 HSPA5P11021 654 aaKnown RBP29.92■■■□□ 2.38
SYNE2-218ENST00000555241 ANKRD24Q8TF21 1146 aa29.92■■■□□ 2.38
SYNE2-218ENST00000555241 IP6K1Q92551 441 aa29.92■■■□□ 2.38
SYNE2-218ENST00000555241 GGNBP2Q9H3C7 697 aa29.91■■■□□ 2.38
SYNE2-218ENST00000555241 NSD3Q9BZ95 1437 aa29.9■■■□□ 2.38
SYNE2-218ENST00000555241 EN1Q05925 392 aaPredicted RBP29.9■■■□□ 2.38
SYNE2-218ENST00000555241 MAP3K19Q56UN5 1328 aa29.9■■■□□ 2.38
SYNE2-218ENST00000555241 NLRP2Q9NX02 1062 aa29.89■■■□□ 2.38
SYNE2-218ENST00000555241 CARD14Q9BXL6 1004 aa29.88■■■□□ 2.37
SYNE2-218ENST00000555241 RTL1A6NKG5 1358 aa29.87■■■□□ 2.37
SYNE2-218ENST00000555241 RGPD2P0DJD1 1756 aa29.87■■■□□ 2.37
SYNE2-218ENST00000555241 TNS2Q63HR2 1409 aa29.86■■■□□ 2.37
SYNE2-218ENST00000555241 RREB1Q92766 1687 aa29.85■■■□□ 2.37
SYNE2-218ENST00000555241 FBLN1P23142 703 aa29.85■■■□□ 2.37
SYNE2-218ENST00000555241 HOXC9P31274 260 aa29.85■■■□□ 2.37
SYNE2-218ENST00000555241 AMPHP49418 695 aa29.85■■■□□ 2.37
SYNE2-218ENST00000555241 EXOC5O00471 708 aa29.84■■■□□ 2.37
SYNE2-218ENST00000555241 APBA3O96018 575 aa29.84■■■□□ 2.37
SYNE2-218ENST00000555241 POLR3GLQ9BT43 218 aa29.84■■■□□ 2.37
SYNE2-218ENST00000555241 PARD3Q8TEW0 1356 aa29.84■■■□□ 2.37
SYNE2-218ENST00000555241 BCL9O00512 1426 aa29.84■■■□□ 2.37
SYNE2-218ENST00000555241 ANKRD26Q9UPS8 1709 aa29.83■■■□□ 2.37
SYNE2-218ENST00000555241 RGPD3A6NKT7 1758 aaPredicted RBP29.82■■■□□ 2.36
SYNE2-218ENST00000555241 RGPD4Q7Z3J3 1758 aa29.82■■■□□ 2.36
SYNE2-218ENST00000555241 MARCH10Q8NA82 808 aaPredicted RBP29.82■■■□□ 2.36
SYNE2-218ENST00000555241 IL2RBP14784 551 aa29.81■■■□□ 2.36
SYNE2-218ENST00000555241 EZH2Q15910 746 aaKnown RBP29.81■■■□□ 2.36
SYNE2-218ENST00000555241 CAMKK2Q96RR4 588 aa29.81■■■□□ 2.36
SYNE2-218ENST00000555241 RRS1Q15050 365 aaKnown RBP29.8■■■□□ 2.36
SYNE2-218ENST00000555241 LTV1Q96GA3 475 aaPredicted RBP29.8■■■□□ 2.36
SYNE2-218ENST00000555241 MAP2P11137 1827 aaKnown RBP29.8■■■□□ 2.36
SYNE2-218ENST00000555241 NUP188Q5SRE5 1749 aa29.79■■■□□ 2.36
SYNE2-218ENST00000555241 KIF24Q5T7B8 1368 aa29.78■■■□□ 2.36
SYNE2-218ENST00000555241 CGNL1Q0VF96 1302 aa29.78■■■□□ 2.36
SYNE2-218ENST00000555241 SRCAPQ6ZRS2 3230 aa29.78■■■□□ 2.36
SYNE2-218ENST00000555241 KAT6BQ8WYB5 2073 aa29.76■■■□□ 2.36
SYNE2-218ENST00000555241 FLT4P35916 1363 aa29.75■■■□□ 2.35
SYNE2-218ENST00000555241 SMG6Q86US8 1419 aaKnown RBP29.74■■■□□ 2.35
SYNE2-218ENST00000555241 NHSQ6T4R5 1651 aa29.73■■■□□ 2.35
SYNE2-218ENST00000555241 BCL11BQ9C0K0 894 aaPredicted RBP29.73■■■□□ 2.35
SYNE2-218ENST00000555241 INSRP06213 1382 aa29.72■■■□□ 2.35
SYNE2-218ENST00000555241 SHANK3Q9BYB0 1731 aa29.7■■■□□ 2.34
SYNE2-218ENST00000555241 PANK3Q9H999 370 aa29.69■■■□□ 2.34
SYNE2-218ENST00000555241 PLSCR1O15162 318 aa29.68■■■□□ 2.34
SYNE2-218ENST00000555241 HSP90AB2PQ58FF8 381 aa29.68■■■□□ 2.34
SYNE2-218ENST00000555241 PSDA5PKW4 1024 aaPredicted RBP29.67■■■□□ 2.34
SYNE2-218ENST00000555241 PTF1AQ7RTS3 328 aa29.66■■■□□ 2.34
SYNE2-218ENST00000555241 EMILIN1Q9Y6C2 1016 aa29.66■■■□□ 2.34
SYNE2-218ENST00000555241 LRP5O75197 1615 aa29.66■■■□□ 2.34
SYNE2-218ENST00000555241 NBPF6Q5VWK0 638 aa29.65■■■□□ 2.34
SYNE2-218ENST00000555241 NBPF4Q96M43 638 aa29.65■■■□□ 2.34
SYNE2-218ENST00000555241 MEGF6O75095 1541 aa29.65■■■□□ 2.34
SYNE2-218ENST00000555241 BTAF1O14981 1849 aa29.64■■■□□ 2.33
SYNE2-218ENST00000555241 NSD2O96028 1365 aa29.64■■■□□ 2.33
SYNE2-218ENST00000555241 R3HDM1Q15032 1099 aaKnown RBP29.62■■■□□ 2.33
SYNE2-218ENST00000555241 NBPF14Q5TI25 921 aa29.6■■■□□ 2.33
SYNE2-218ENST00000555241 KIF7Q2M1P5 1343 aa29.6■■■□□ 2.33
SYNE2-218ENST00000555241 WASHC2AQ641Q2 1341 aa29.59■■■□□ 2.33
SYNE2-218ENST00000555241 DOT1LQ8TEK3 1739 aa29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms