RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 CNTNAP3Q9BZ76 1288 aa6.09□□□□□ -1.43
KTN1-220ENST00000555172 ADAMTS8Q9UP79 889 aa6.09□□□□□ -1.43
KTN1-220ENST00000555172 DNMT3AQ9Y6K1 912 aaPredicted RBP6.09□□□□□ -1.43
KTN1-220ENST00000555172 MFAP1P55081 439 aaKnown RBP6.08□□□□□ -1.44
KTN1-220ENST00000555172 TMCO4Q5TGY1 634 aa6.08□□□□□ -1.44
KTN1-220ENST00000555172 PRR7Q8TB68 274 aa6.08□□□□□ -1.44
KTN1-220ENST00000555172 GPAT2Q6NUI2 795 aa6.07□□□□□ -1.44
KTN1-220ENST00000555172 TRAIPQ9BWF2 469 aa6.07□□□□□ -1.44
KTN1-220ENST00000555172 CHMP4AQ9BY43 222 aa6.07□□□□□ -1.44
KTN1-220ENST00000555172 DNMT3LQ9UJW3 386 aa6.07□□□□□ -1.44
KTN1-220ENST00000555172 BMP2P12643 396 aa6.07□□□□□ -1.44
KTN1-220ENST00000555172 DIXDC1Q155Q3 683 aa6.07□□□□□ -1.44
KTN1-220ENST00000555172 MOXD2PA6NHM9 499 aa6.06□□□□□ -1.44
KTN1-220ENST00000555172 HSP90B1P14625 803 aaKnown RBP6.06□□□□□ -1.44
KTN1-220ENST00000555172 MPNDQ8N594 471 aa6.06□□□□□ -1.44
KTN1-220ENST00000555172 GZF1Q9H116 711 aaPredicted RBP6.06□□□□□ -1.44
KTN1-220ENST00000555172 POLR3EQ9NVU0 708 aa6.06□□□□□ -1.44
KTN1-220ENST00000555172 TRAK2O60296 914 aa6.06□□□□□ -1.44
KTN1-220ENST00000555172 CTHP32929 405 aa6.06□□□□□ -1.44
KTN1-220ENST00000555172 SPIRE2Q8WWL2 714 aa6.06□□□□□ -1.44
KTN1-220ENST00000555172 PSMG3-AS1Q96PY0 264 aa6.06□□□□□ -1.44
KTN1-220ENST00000555172 A6NJR5 290 aa6.05□□□□□ -1.44
KTN1-220ENST00000555172 C4orf48Q5BLP8 95 aa6.05□□□□□ -1.44
KTN1-220ENST00000555172 WHAMMQ8TF30 809 aa6.05□□□□□ -1.44
KTN1-220ENST00000555172 GRM5P41594 1212 aa6.04□□□□□ -1.44
KTN1-220ENST00000555172 FAM174AQ8TBP5 190 aa6.04□□□□□ -1.44
KTN1-220ENST00000555172 MCM6Q14566 821 aa6.04□□□□□ -1.44
KTN1-220ENST00000555172 RNFT1Q5M7Z0 435 aa6.04□□□□□ -1.44
KTN1-220ENST00000555172 MYSM1Q5VVJ2 828 aa6.04□□□□□ -1.44
KTN1-220ENST00000555172 LINC00528Q8N1L1 170 aa6.04□□□□□ -1.44
KTN1-220ENST00000555172 PROCA1Q8NCQ7 364 aaPredicted RBP6.04□□□□□ -1.44
KTN1-220ENST00000555172 CDK15Q96Q40 435 aa6.04□□□□□ -1.44
KTN1-220ENST00000555172 MAP10Q9P2G4 905 aa6.04□□□□□ -1.44
KTN1-220ENST00000555172 SOS2Q07890 1332 aaPredicted RBP6.03□□□□□ -1.44
KTN1-220ENST00000555172 CLK2P49760 499 aaKnown RBP6.03□□□□□ -1.44
KTN1-220ENST00000555172 ZNF385CQ66K41 422 aaPredicted RBP6.03□□□□□ -1.44
KTN1-220ENST00000555172 RETREG2Q8NC44 543 aa6.03□□□□□ -1.44
KTN1-220ENST00000555172 COL25A1Q9BXS0 654 aaPredicted RBP6.03□□□□□ -1.44
KTN1-220ENST00000555172 TBC1D2Q9BYX2 928 aa6.03□□□□□ -1.44
KTN1-220ENST00000555172 FIGNL2A6NMB9 653 aa6.02□□□□□ -1.45
KTN1-220ENST00000555172 IRS1P35568 1242 aa6.02□□□□□ -1.45
KTN1-220ENST00000555172 IRF5Q13568 498 aa6.02□□□□□ -1.45
KTN1-220ENST00000555172 MTMR2Q13614 643 aa6.02□□□□□ -1.45
KTN1-220ENST00000555172 ZNF777Q9ULD5 760 aaPredicted RBP6.02□□□□□ -1.45
KTN1-220ENST00000555172 PTSQ03393 145 aa6.01□□□□□ -1.45
KTN1-220ENST00000555172 AGERQ15109 404 aa6.01□□□□□ -1.45
KTN1-220ENST00000555172 KANK3Q6NY19 840 aa6.01□□□□□ -1.45
KTN1-220ENST00000555172 MEIOBQ8N635 442 aa6.01□□□□□ -1.45
KTN1-220ENST00000555172 PUS7Q96PZ0 661 aaKnown RBP6.01□□□□□ -1.45
KTN1-220ENST00000555172 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.01□□□□□ -1.45
KTN1-220ENST00000555172 KRTAP9-2Q9BYQ4 174 aa6.01□□□□□ -1.45
KTN1-220ENST00000555172 KRTAP9-1A8MXZ3 250 aaPredicted RBP6□□□□□ -1.45
KTN1-220ENST00000555172 HMGB1P09429 215 aaKnown RBP6□□□□□ -1.45
KTN1-220ENST00000555172 SVOPQ8N4V2 548 aa6□□□□□ -1.45
KTN1-220ENST00000555172 PCDHB15Q9Y5E8 787 aa6□□□□□ -1.45
KTN1-220ENST00000555172 CFAP99D6REC4 459 aa6□□□□□ -1.45
KTN1-220ENST00000555172 UPP2O95045 317 aa6□□□□□ -1.45
KTN1-220ENST00000555172 NR5A1Q13285 461 aa6□□□□□ -1.45
KTN1-220ENST00000555172 LYPD8Q6UX82 237 aa6□□□□□ -1.45
KTN1-220ENST00000555172 SPDYE5A6NIY4 337 aa5.99□□□□□ -1.45
KTN1-220ENST00000555172 RIC3Q7Z5B4 369 aa5.99□□□□□ -1.45
KTN1-220ENST00000555172 BANK1Q8NDB2 785 aa5.99□□□□□ -1.45
KTN1-220ENST00000555172 ADAM23O75077 832 aa5.98□□□□□ -1.45
KTN1-220ENST00000555172 TMEM259Q4ZIN3 620 aa5.98□□□□□ -1.45
KTN1-220ENST00000555172 DESI1Q6ICB0 168 aa5.98□□□□□ -1.45
KTN1-220ENST00000555172 PROSER2Q86WR7 435 aaPredicted RBP5.98□□□□□ -1.45
KTN1-220ENST00000555172 USP35Q9P2H5 1018 aa5.98□□□□□ -1.45
KTN1-220ENST00000555172 PER1O15534 1290 aaPredicted RBP5.98□□□□□ -1.45
KTN1-220ENST00000555172 RFC5P40937 340 aa5.98□□□□□ -1.45
KTN1-220ENST00000555172 KRTAP9-6A0A140TA67 174 aa5.97□□□□□ -1.45
KTN1-220ENST00000555172 TTLL8A6PVC2 850 aa5.97□□□□□ -1.45
KTN1-220ENST00000555172 E9PSI1 815 aa5.97□□□□□ -1.45
KTN1-220ENST00000555172 F12P00748 615 aaPredicted RBP5.97□□□□□ -1.45
KTN1-220ENST00000555172 FSHRP23945 695 aa5.97□□□□□ -1.45
KTN1-220ENST00000555172 VWA5B2Q8N398 1253 aa5.97□□□□□ -1.45
KTN1-220ENST00000555172 SPTLC1O15269 473 aa5.97□□□□□ -1.45
KTN1-220ENST00000555172 ARHGEF15O94989 841 aa5.97□□□□□ -1.45
KTN1-220ENST00000555172 CBLBQ13191 982 aa5.97□□□□□ -1.45
KTN1-220ENST00000555172 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.97□□□□□ -1.453e-7■□□□□ 11.2
KTN1-220ENST00000555172 CCDC155Q8N6L0 562 aa5.97□□□□□ -1.45
KTN1-220ENST00000555172 LIMD1Q9UGP4 676 aa5.97□□□□□ -1.45
KTN1-220ENST00000555172 TUSC1Q2TAM9 212 aa5.96□□□□□ -1.46
KTN1-220ENST00000555172 POM121Q96HA1 1249 aa5.96□□□□□ -1.46
KTN1-220ENST00000555172 CDC14CA4D256 554 aa5.95□□□□□ -1.46
KTN1-220ENST00000555172 PPP2R2DQ66LE6 453 aa5.95□□□□□ -1.46
KTN1-220ENST00000555172 KRTAP1-3Q8IUG1 177 aa5.95□□□□□ -1.46
KTN1-220ENST00000555172 CABLES1Q8TDN4 633 aa5.95□□□□□ -1.46
KTN1-220ENST00000555172 GJA5P36382 358 aa5.95□□□□□ -1.46
KTN1-220ENST00000555172 RSBN1LQ6PCB5 846 aaPredicted RBP5.95□□□□□ -1.46
KTN1-220ENST00000555172 WWC1Q8IX03 1113 aa5.95□□□□□ -1.46
KTN1-220ENST00000555172 CCDC97Q96F63 343 aaPredicted RBP5.95□□□□□ -1.46
KTN1-220ENST00000555172 TSEN34Q9BSV6 310 aaKnown RBP5.95□□□□□ -1.46
KTN1-220ENST00000555172 PRM3Q9NNZ6 103 aa5.95□□□□□ -1.46
KTN1-220ENST00000555172 MARSP56192 900 aaKnown RBP5.94□□□□□ -1.46
KTN1-220ENST00000555172 CSPP1Q1MSJ5 1256 aa5.94□□□□□ -1.46
KTN1-220ENST00000555172 VASH1Q7L8A9 365 aaPredicted RBP5.94□□□□□ -1.46
KTN1-220ENST00000555172 BPHLQ86WA6 291 aaPredicted RBP5.94□□□□□ -1.46
KTN1-220ENST00000555172 NANOS1Q8WY41 292 aaKnown RBP5.94□□□□□ -1.46
KTN1-220ENST00000555172 SNRKQ9NRH2 765 aa5.94□□□□□ -1.46
KTN1-220ENST00000555172 MSTNO14793 375 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms