RNA–Protein interactions for RNA: ENST00000555052.1

ARHGEF40-205, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 3

Gene ARHGEF40, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-205ENST00000555052 WDR17Q8IZU2 1322 aa22.39■■□□□ 1.18
ARHGEF40-205ENST00000555052 KCNH5Q8NCM2 988 aa22.39■■□□□ 1.17
ARHGEF40-205ENST00000555052 OVOS2A0A0G2JMS6 1433 aa22.39■■□□□ 1.17
ARHGEF40-205ENST00000555052 OVOS2A0A0J9YW53 1432 aa22.39■■□□□ 1.17
ARHGEF40-205ENST00000555052 OVOS2Q6IE36 1432 aa22.39■■□□□ 1.17
ARHGEF40-205ENST00000555052 KTN1Q86UP2 1357 aaKnown RBP22.38■■□□□ 1.17
ARHGEF40-205ENST00000555052 CD163L1Q9NR16 1453 aa22.37■■□□□ 1.17
ARHGEF40-205ENST00000555052 C11orf95C9JLR9 678 aaPredicted RBP22.37■■□□□ 1.17
ARHGEF40-205ENST00000555052 TOM1L2Q6ZVM7 507 aa22.37■■□□□ 1.17
ARHGEF40-205ENST00000555052 RGPD5Q99666 1765 aa22.37■■□□□ 1.17
ARHGEF40-205ENST00000555052 ABCC6O95255 1503 aa22.36■■□□□ 1.17
ARHGEF40-205ENST00000555052 USP54Q70EL1 1684 aa22.36■■□□□ 1.17
ARHGEF40-205ENST00000555052 SBF2Q86WG5 1849 aa22.36■■□□□ 1.17
ARHGEF40-205ENST00000555052 CARD11Q9BXL7 1154 aa22.35■■□□□ 1.17
ARHGEF40-205ENST00000555052 DDB1Q16531 1140 aa22.34■■□□□ 1.17
ARHGEF40-205ENST00000555052 USP31Q70CQ4 1352 aa22.34■■□□□ 1.17
ARHGEF40-205ENST00000555052 RGPD3A6NKT7 1758 aaPredicted RBP22.33■■□□□ 1.17
ARHGEF40-205ENST00000555052 RGPD4Q7Z3J3 1758 aa22.33■■□□□ 1.17
ARHGEF40-205ENST00000555052 BCL9O00512 1426 aa22.32■■□□□ 1.16
ARHGEF40-205ENST00000555052 SOX12O15370 315 aa22.32■■□□□ 1.16
ARHGEF40-205ENST00000555052 CARD10Q9BWT7 1032 aa22.32■■□□□ 1.16
ARHGEF40-205ENST00000555052 CDCA7Q9BWT1 371 aaPredicted RBP22.31■■□□□ 1.16
ARHGEF40-205ENST00000555052 TONSLQ96HA7 1378 aa22.3■■□□□ 1.16
ARHGEF40-205ENST00000555052 MARCH10Q8NA82 808 aaPredicted RBP22.29■■□□□ 1.16
ARHGEF40-205ENST00000555052 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.28■■□□□ 1.16
ARHGEF40-205ENST00000555052 CCDC7Q96M83 1385 aa22.27■■□□□ 1.16
ARHGEF40-205ENST00000555052 PLSCR1O15162 318 aa22.27■■□□□ 1.16
ARHGEF40-205ENST00000555052 CSB-PGBD3P0DP91 1061 aa22.27■■□□□ 1.16
ARHGEF40-205ENST00000555052 NBPF14Q5TI25 921 aa22.27■■□□□ 1.16
ARHGEF40-205ENST00000555052 EDC4Q6P2E9 1401 aaKnown RBP22.27■■□□□ 1.16
ARHGEF40-205ENST00000555052 PTF1AQ7RTS3 328 aa22.27■■□□□ 1.16
ARHGEF40-205ENST00000555052 NME9Q86XW9 330 aa22.27■■□□□ 1.16
ARHGEF40-205ENST00000555052 PUS7Q96PZ0 661 aaKnown RBP22.26■■□□□ 1.15
ARHGEF40-205ENST00000555052 BCL11BQ9C0K0 894 aaPredicted RBP22.26■■□□□ 1.15
ARHGEF40-205ENST00000555052 SLC12A5Q9H2X9 1139 aa22.26■■□□□ 1.15
ARHGEF40-205ENST00000555052 TMC1Q8TDI8 760 aa22.25■■□□□ 1.15
ARHGEF40-205ENST00000555052 LTN1O94822 1766 aa22.25■■□□□ 1.15
ARHGEF40-205ENST00000555052 A0A1W2PP64 1363 aa22.25■■□□□ 1.15
ARHGEF40-205ENST00000555052 TNS2Q63HR2 1409 aa22.24■■□□□ 1.15
ARHGEF40-205ENST00000555052 HDGFL2Q7Z4V5 671 aaPredicted RBP22.24■■□□□ 1.15
ARHGEF40-205ENST00000555052 ERBB3P21860 1342 aa22.24■■□□□ 1.15
ARHGEF40-205ENST00000555052 TESK2Q96S53 571 aa22.22■■□□□ 1.15
ARHGEF40-205ENST00000555052 TERF2IPQ9NYB0 399 aa22.21■■□□□ 1.15
ARHGEF40-205ENST00000555052 EXOC5O00471 708 aa22.2■■□□□ 1.14
ARHGEF40-205ENST00000555052 ANO8Q9HCE9 1232 aaPredicted RBP22.2■■□□□ 1.14
ARHGEF40-205ENST00000555052 PROM2Q8N271 834 aa22.19■■□□□ 1.14
ARHGEF40-205ENST00000555052 NINLQ9Y2I6 1382 aa22.19■■□□□ 1.14
ARHGEF40-205ENST00000555052 ST20-MTHFSA0A0A6YYL1 179 aa22.17■■□□□ 1.14
ARHGEF40-205ENST00000555052 CASZ1Q86V15 1759 aa22.17■■□□□ 1.14
ARHGEF40-205ENST00000555052 NLRP2Q9NX02 1062 aa22.16■■□□□ 1.14
ARHGEF40-205ENST00000555052 NHSQ6T4R5 1651 aa22.16■■□□□ 1.14
ARHGEF40-205ENST00000555052 ANKRD24Q8TF21 1146 aa22.15■■□□□ 1.14
ARHGEF40-205ENST00000555052 SPON1Q9HCB6 807 aa22.15■■□□□ 1.14
ARHGEF40-205ENST00000555052 KCNQ2O43526 872 aa22.14■■□□□ 1.13
ARHGEF40-205ENST00000555052 UTRNP46939 3433 aa22.13■■□□□ 1.13
ARHGEF40-205ENST00000555052 IL2RBP14784 551 aa22.13■■□□□ 1.13
ARHGEF40-205ENST00000555052 TXNRD1Q16881 649 aa22.12■■□□□ 1.13
ARHGEF40-205ENST00000555052 SLC24A1O60721 1099 aa22.11■■□□□ 1.13
ARHGEF40-205ENST00000555052 IP6K1Q92551 441 aa22.11■■□□□ 1.13
ARHGEF40-205ENST00000555052 FAM208AQ9UK61 1670 aaKnown RBP22.11■■□□□ 1.13
ARHGEF40-205ENST00000555052 PDGFDQ9GZP0 370 aaPredicted RBP22.09■■□□□ 1.13
ARHGEF40-205ENST00000555052 ANKRD36BQ8N2N9 1353 aa22.09■■□□□ 1.13
ARHGEF40-205ENST00000555052 KAT6BQ8WYB5 2073 aa22.08■■□□□ 1.12
ARHGEF40-205ENST00000555052 TRIM26Q12899 539 aaPredicted RBP22.07■■□□□ 1.12
ARHGEF40-205ENST00000555052 ACSBG1Q96GR2 724 aa22.07■■□□□ 1.12
ARHGEF40-205ENST00000555052 COG3Q96JB2 828 aa22.07■■□□□ 1.12
ARHGEF40-205ENST00000555052 BTAF1O14981 1849 aa22.07■■□□□ 1.12
ARHGEF40-205ENST00000555052 MAP3K19Q56UN5 1328 aa22.06■■□□□ 1.12
ARHGEF40-205ENST00000555052 PAPPAQ13219 1627 aa22.06■■□□□ 1.12
ARHGEF40-205ENST00000555052 PPP1R1BQ9UD71 204 aaPredicted RBP22.06■■□□□ 1.12
ARHGEF40-205ENST00000555052 USP47Q96K76 1375 aa22.06■■□□□ 1.12
ARHGEF40-205ENST00000555052 SLC15A2Q16348 729 aa22.05■■□□□ 1.12
ARHGEF40-205ENST00000555052 STK32BQ9NY57 414 aa22.05■■□□□ 1.12
ARHGEF40-205ENST00000555052 HOXC9P31274 260 aa22.04■■□□□ 1.12
ARHGEF40-205ENST00000555052 RTL1A6NKG5 1358 aa22.02■■□□□ 1.12
ARHGEF40-205ENST00000555052 ZBTB7AO95365 584 aa22.02■■□□□ 1.12
ARHGEF40-205ENST00000555052 FBLN1P23142 703 aa22.02■■□□□ 1.12
ARHGEF40-205ENST00000555052 PTGER2P43116 358 aa22.02■■□□□ 1.12
ARHGEF40-205ENST00000555052 LTV1Q96GA3 475 aaPredicted RBP22.02■■□□□ 1.12
ARHGEF40-205ENST00000555052 TMF1P82094 1093 aa22.01■■□□□ 1.11
ARHGEF40-205ENST00000555052 MYOM1P52179 1685 aa22.01■■□□□ 1.11
ARHGEF40-205ENST00000555052 RGPD2P0DJD1 1756 aa22■■□□□ 1.11
ARHGEF40-205ENST00000555052 GOLGB1Q14789 3259 aaKnown RBP22■■□□□ 1.11
ARHGEF40-205ENST00000555052 SHANK3Q9BYB0 1731 aa22■■□□□ 1.11
ARHGEF40-205ENST00000555052 FYB1O15117 783 aa21.99■■□□□ 1.11
ARHGEF40-205ENST00000555052 AMPHP49418 695 aa21.99■■□□□ 1.11
ARHGEF40-205ENST00000555052 MEGF6O75095 1541 aa21.98■■□□□ 1.11
ARHGEF40-205ENST00000555052 LRRC4BQ9NT99 713 aa21.97■■□□□ 1.11
ARHGEF40-205ENST00000555052 RRS1Q15050 365 aaKnown RBP21.96■■□□□ 1.11
ARHGEF40-205ENST00000555052 DDX54Q8TDD1 881 aaKnown RBP21.96■■□□□ 1.11
ARHGEF40-205ENST00000555052 SGIP1Q9BQI5 828 aa21.96■■□□□ 1.11
ARHGEF40-205ENST00000555052 GGNBP2Q9H3C7 697 aa21.96■■□□□ 1.11
ARHGEF40-205ENST00000555052 ATF5Q9Y2D1 282 aaPredicted RBP21.96■■□□□ 1.11
ARHGEF40-205ENST00000555052 KIF20BQ96Q89 1820 aa21.95■■□□□ 1.1
ARHGEF40-205ENST00000555052 ZNF827Q17R98 1081 aa21.95■■□□□ 1.1
ARHGEF40-205ENST00000555052 MTFR1LQ9H019 292 aa21.95■■□□□ 1.1
ARHGEF40-205ENST00000555052 DOT1LQ8TEK3 1739 aa21.94■■□□□ 1.1
ARHGEF40-205ENST00000555052 NSD2O96028 1365 aa21.94■■□□□ 1.1
ARHGEF40-205ENST00000555052 CDCA8Q53HL2 280 aa21.93■■□□□ 1.1
ARHGEF40-205ENST00000555052 NBPF6Q5VWK0 638 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms