RNA–Protein interactions for RNA: ENST00000554981.1

TMEM260-205, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-205ENST00000554981 EN1Q05925 392 aaPredicted RBP8.21□□□□□ -1.1
TMEM260-205ENST00000554981 SEPT12Q8IYM1 358 aa8.21□□□□□ -1.1
TMEM260-205ENST00000554981 ORAI2Q96SN7 254 aa8.21□□□□□ -1.1
TMEM260-205ENST00000554981 SOS2Q07890 1332 aaPredicted RBP8.21□□□□□ -1.1
TMEM260-205ENST00000554981 COL22A1Q8NFW1 1626 aaPredicted RBP8.21□□□□□ -1.1
TMEM260-205ENST00000554981 NALCNQ8IZF0 1738 aa8.2□□□□□ -1.1
TMEM260-205ENST00000554981 MYOM2P54296 1465 aa8.2□□□□□ -1.1
TMEM260-205ENST00000554981 PLPP6Q8IY26 295 aa8.2□□□□□ -1.1
TMEM260-205ENST00000554981 CAMTA1Q9Y6Y1 1673 aa8.2□□□□□ -1.1
TMEM260-205ENST00000554981 PIK3R4Q99570 1358 aa8.2□□□□□ -1.1
TMEM260-205ENST00000554981 PPLO60437 1756 aa8.2□□□□□ -1.1
TMEM260-205ENST00000554981 C1orf167Q5SNV9 1468 aa8.19□□□□□ -1.1
TMEM260-205ENST00000554981 LAMC1P11047 1609 aa8.19□□□□□ -1.1
TMEM260-205ENST00000554981 KRT27Q7Z3Y8 459 aa8.19□□□□□ -1.1
TMEM260-205ENST00000554981 ZNF784Q8NCA9 323 aaPredicted RBP8.19□□□□□ -1.1
TMEM260-205ENST00000554981 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.19□□□□□ -1.1
TMEM260-205ENST00000554981 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.19□□□□□ -1.1
TMEM260-205ENST00000554981 METP08581 1390 aa8.19□□□□□ -1.1
TMEM260-205ENST00000554981 ADGRL3Q9HAR2 1447 aa8.19□□□□□ -1.1
TMEM260-205ENST00000554981 XPCQ01831 940 aaPredicted RBP8.18□□□□□ -1.1
TMEM260-205ENST00000554981 FAM182BQ5T319 152 aa8.18□□□□□ -1.1
TMEM260-205ENST00000554981 UNC5CLQ8IV45 518 aa8.18□□□□□ -1.1
TMEM260-205ENST00000554981 MPHOSPH9Q99550 1183 aa8.18□□□□□ -1.1
TMEM260-205ENST00000554981 C1QTNF8P60827 252 aa8.17□□□□□ -1.1
TMEM260-205ENST00000554981 CAMK2BQ13554 666 aa8.17□□□□□ -1.1
TMEM260-205ENST00000554981 RGL3Q3MIN7 710 aa8.17□□□□□ -1.1
TMEM260-205ENST00000554981 RAB3GAP2Q9H2M9 1393 aa8.17□□□□□ -1.1
TMEM260-205ENST00000554981 CCDC144AA2RUR9 1427 aa8.17□□□□□ -1.1
TMEM260-205ENST00000554981 A0A0G2JS52 829 aa8.16□□□□□ -1.1
TMEM260-205ENST00000554981 KIF3CO14782 793 aa8.16□□□□□ -1.1
TMEM260-205ENST00000554981 SLIT2O94813 1529 aa8.16□□□□□ -1.1
TMEM260-205ENST00000554981 MYT1Q01538 1121 aa8.16□□□□□ -1.1
TMEM260-205ENST00000554981 EZH2Q15910 746 aaKnown RBP8.16□□□□□ -1.1
TMEM260-205ENST00000554981 TPRNQ4KMQ1 711 aa8.16□□□□□ -1.1
TMEM260-205ENST00000554981 IFT172Q9UG01 1749 aa8.16□□□□□ -1.1
TMEM260-205ENST00000554981 CCDC9Q9Y3X0 531 aaKnown RBP8.15□□□□□ -1.1
TMEM260-205ENST00000554981 ADGRF5Q8IZF2 1346 aa8.14□□□□□ -1.11
TMEM260-205ENST00000554981 MAP3K9P80192 1104 aa8.14□□□□□ -1.11
TMEM260-205ENST00000554981 TMEM92Q6UXU6 159 aa8.14□□□□□ -1.11
TMEM260-205ENST00000554981 MAMSTRQ6ZN01 415 aa8.14□□□□□ -1.11
TMEM260-205ENST00000554981 PPP1R1BQ9UD71 204 aaPredicted RBP8.14□□□□□ -1.11
TMEM260-205ENST00000554981 RGPD1P0DJD0 1748 aa8.14□□□□□ -1.11
TMEM260-205ENST00000554981 SPATA31E1Q6ZUB1 1445 aa8.13□□□□□ -1.11
TMEM260-205ENST00000554981 TNS1Q9HBL0 1735 aaKnown RBP8.13□□□□□ -1.11
TMEM260-205ENST00000554981 DPYSL4O14531 572 aa8.13□□□□□ -1.11
TMEM260-205ENST00000554981 SEMA3EO15041 775 aa8.13□□□□□ -1.11
TMEM260-205ENST00000554981 SMYD5Q6GMV2 418 aa8.13□□□□□ -1.11
TMEM260-205ENST00000554981 ARIH1Q9Y4X5 557 aaPredicted RBP8.13□□□□□ -1.11
TMEM260-205ENST00000554981 PXDNQ92626 1479 aa8.13□□□□□ -1.11
TMEM260-205ENST00000554981 ROBO2Q9HCK4 1378 aa8.12□□□□□ -1.11
TMEM260-205ENST00000554981 VPS72Q15906 364 aa8.12□□□□□ -1.11
TMEM260-205ENST00000554981 STK26Q9P289 416 aa8.12□□□□□ -1.11
TMEM260-205ENST00000554981 PLCH1Q4KWH8 1693 aa8.11□□□□□ -1.11
TMEM260-205ENST00000554981 RPGRIP1LQ68CZ1 1315 aa8.11□□□□□ -1.11
TMEM260-205ENST00000554981 FOXO3O43524 673 aa8.11□□□□□ -1.11
TMEM260-205ENST00000554981 ONECUT3O60422 494 aaPredicted RBP8.11□□□□□ -1.11
TMEM260-205ENST00000554981 PRKCSHP14314 528 aaPredicted RBP8.11□□□□□ -1.11
TMEM260-205ENST00000554981 FAM98CQ17RN3 349 aaKnown RBP8.11□□□□□ -1.11
TMEM260-205ENST00000554981 CAMKK2Q96RR4 588 aa8.11□□□□□ -1.11
TMEM260-205ENST00000554981 SCUBE2Q9NQ36 999 aa8.11□□□□□ -1.11
TMEM260-205ENST00000554981 EMILIN3Q9NT22 766 aa8.11□□□□□ -1.11
TMEM260-205ENST00000554981 USP32Q8NFA0 1604 aa8.11□□□□□ -1.11
TMEM260-205ENST00000554981 SPDYE16A6NNV3 312 aaPredicted RBP8.1□□□□□ -1.11
TMEM260-205ENST00000554981 TBC1D12O60347 775 aa8.1□□□□□ -1.11
TMEM260-205ENST00000554981 ESCO1Q5FWF5 840 aa8.1□□□□□ -1.11
TMEM260-205ENST00000554981 TMEM132EQ6IEE7 984 aa8.1□□□□□ -1.11
TMEM260-205ENST00000554981 ANKRD30BQ9BXX2 1392 aa8.1□□□□□ -1.11
TMEM260-205ENST00000554981 NINLQ9Y2I6 1382 aa8.1□□□□□ -1.11
TMEM260-205ENST00000554981 KNDC1Q76NI1 1749 aa8.09□□□□□ -1.11
TMEM260-205ENST00000554981 NPHP3Q7Z494 1330 aa8.09□□□□□ -1.11
TMEM260-205ENST00000554981 CABLES1Q8TDN4 633 aa8.09□□□□□ -1.11
TMEM260-205ENST00000554981 SPON1Q9HCB6 807 aa8.09□□□□□ -1.11
TMEM260-205ENST00000554981 DISP2A7MBM2 1401 aa8.09□□□□□ -1.11
TMEM260-205ENST00000554981 PIK3C2GO75747 1445 aa8.09□□□□□ -1.11
TMEM260-205ENST00000554981 PLEKHH1Q9ULM0 1364 aa8.09□□□□□ -1.12
TMEM260-205ENST00000554981 NUTM2FA1L443 756 aa8.08□□□□□ -1.12
TMEM260-205ENST00000554981 TESPA1A2RU30 521 aaPredicted RBP8.08□□□□□ -1.12
TMEM260-205ENST00000554981 KCNQ2O43526 872 aa8.08□□□□□ -1.12
TMEM260-205ENST00000554981 TRIM37O94972 964 aa8.08□□□□□ -1.12
TMEM260-205ENST00000554981 NUP188Q5SRE5 1749 aa8.08□□□□□ -1.12
TMEM260-205ENST00000554981 CDC42BPGQ6DT37 1551 aa8.07□□□□□ -1.12
TMEM260-205ENST00000554981 PRAG1Q86YV5 1406 aa8.07□□□□□ -1.12
TMEM260-205ENST00000554981 APBA3O96018 575 aa8.07□□□□□ -1.12
TMEM260-205ENST00000554981 LMOD2Q6P5Q4 547 aa8.07□□□□□ -1.12
TMEM260-205ENST00000554981 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.07□□□□□ -1.12
TMEM260-205ENST00000554981 WAPLQ7Z5K2 1190 aa8.07□□□□□ -1.12
TMEM260-205ENST00000554981 RREB1Q92766 1687 aa8.07□□□□□ -1.12
TMEM260-205ENST00000554981 LRPPRCP42704 1394 aaKnown RBP8.07□□□□□ -1.12
TMEM260-205ENST00000554981 YTHDC2Q9H6S0 1430 aaKnown RBP8.06□□□□□ -1.12
TMEM260-205ENST00000554981 ZNF316A6NFI3 1004 aaPredicted RBP8.06□□□□□ -1.12
TMEM260-205ENST00000554981 SAFB2Q14151 953 aaKnown RBP eCLIP8.06□□□□□ -1.12
TMEM260-205ENST00000554981 CFAP70Q5T0N1 1121 aa8.06□□□□□ -1.12
TMEM260-205ENST00000554981 SLAIN1Q8ND83 568 aa8.06□□□□□ -1.12
TMEM260-205ENST00000554981 NWD2Q9ULI1 1742 aa8.06□□□□□ -1.12
TMEM260-205ENST00000554981 NRXN1Q9ULB1 1477 aa8.06□□□□□ -1.12
TMEM260-205ENST00000554981 NRKQ7Z2Y5 1582 aa8.05□□□□□ -1.12
TMEM260-205ENST00000554981 PDIA6Q15084 440 aa8.05□□□□□ -1.12
TMEM260-205ENST00000554981 OXER1Q8TDS5 423 aa8.05□□□□□ -1.12
TMEM260-205ENST00000554981 FMN2Q9NZ56 1722 aa8.05□□□□□ -1.12
TMEM260-205ENST00000554981 ADGRB2O60241 1585 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms