RNA–Protein interactions for RNA: ENST00000554877.1

CCDC85C-202, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 4

Gene CCDC85C, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-202ENST00000554877 PIK3C2AO00443 1686 aa17.25■□□□□ 0.35
CCDC85C-202ENST00000554877 AKAP12Q02952 1782 aa17.25■□□□□ 0.35
CCDC85C-202ENST00000554877 WDR17Q8IZU2 1322 aa17.24■□□□□ 0.35
CCDC85C-202ENST00000554877 TMF1P82094 1093 aa17.24■□□□□ 0.35
CCDC85C-202ENST00000554877 SLIT3O75094 1523 aa17.24■□□□□ 0.35
CCDC85C-202ENST00000554877 THSD7AQ9UPZ6 1657 aa17.23■□□□□ 0.35
CCDC85C-202ENST00000554877 LTV1Q96GA3 475 aaPredicted RBP17.23■□□□□ 0.35
CCDC85C-202ENST00000554877 POLR3GLQ9BT43 218 aa17.23■□□□□ 0.35
CCDC85C-202ENST00000554877 LMO7Q8WWI1 1683 aa17.23■□□□□ 0.35
CCDC85C-202ENST00000554877 R3HDM1Q15032 1099 aaKnown RBP17.22■□□□□ 0.35
CCDC85C-202ENST00000554877 PUS7Q96PZ0 661 aaKnown RBP17.22■□□□□ 0.35
CCDC85C-202ENST00000554877 A0A1W2PP64 1363 aa17.22■□□□□ 0.35
CCDC85C-202ENST00000554877 CD163L1Q9NR16 1453 aa17.21■□□□□ 0.35
CCDC85C-202ENST00000554877 USP47Q96K76 1375 aa17.21■□□□□ 0.35
CCDC85C-202ENST00000554877 SLC24A1O60721 1099 aa17.21■□□□□ 0.35
CCDC85C-202ENST00000554877 FBLN1P23142 703 aa17.21■□□□□ 0.35
CCDC85C-202ENST00000554877 CARD10Q9BWT7 1032 aa17.21■□□□□ 0.35
CCDC85C-202ENST00000554877 EXOC5O00471 708 aa17.2■□□□□ 0.34
CCDC85C-202ENST00000554877 COG3Q96JB2 828 aa17.2■□□□□ 0.34
CCDC85C-202ENST00000554877 CAMKK2Q96RR4 588 aa17.2■□□□□ 0.34
CCDC85C-202ENST00000554877 MON2Q7Z3U7 1717 aa17.19■□□□□ 0.34
CCDC85C-202ENST00000554877 USP31Q70CQ4 1352 aa17.19■□□□□ 0.34
CCDC85C-202ENST00000554877 ANKRD24Q8TF21 1146 aa17.19■□□□□ 0.34
CCDC85C-202ENST00000554877 EDC4Q6P2E9 1401 aaKnown RBP17.19■□□□□ 0.34
CCDC85C-202ENST00000554877 MARCH10Q8NA82 808 aaPredicted RBP17.18■□□□□ 0.34
CCDC85C-202ENST00000554877 AMPHP49418 695 aa17.17■□□□□ 0.34
CCDC85C-202ENST00000554877 PTF1AQ7RTS3 328 aa17.17■□□□□ 0.34
CCDC85C-202ENST00000554877 CDCA7Q9BWT1 371 aaPredicted RBP17.17■□□□□ 0.34
CCDC85C-202ENST00000554877 GGNBP2Q9H3C7 697 aa17.17■□□□□ 0.34
CCDC85C-202ENST00000554877 COL18A1P39060 1754 aa17.15■□□□□ 0.34
CCDC85C-202ENST00000554877 CDCA8Q53HL2 280 aa17.15■□□□□ 0.34
CCDC85C-202ENST00000554877 NBPF14Q5TI25 921 aa17.15■□□□□ 0.34
CCDC85C-202ENST00000554877 RGPD1P0DJD0 1748 aa17.15■□□□□ 0.34
CCDC85C-202ENST00000554877 NFAT5O94916 1531 aa17.15■□□□□ 0.34
CCDC85C-202ENST00000554877 RGPD5Q99666 1765 aa17.15■□□□□ 0.34
CCDC85C-202ENST00000554877 MYOM1P52179 1685 aa17.14■□□□□ 0.33
CCDC85C-202ENST00000554877 USP54Q70EL1 1684 aa17.14■□□□□ 0.33
CCDC85C-202ENST00000554877 ACSBG1Q96GR2 724 aa17.14■□□□□ 0.33
CCDC85C-202ENST00000554877 C11orf95C9JLR9 678 aaPredicted RBP17.13■□□□□ 0.33
CCDC85C-202ENST00000554877 RRS1Q15050 365 aaKnown RBP17.13■□□□□ 0.33
CCDC85C-202ENST00000554877 IP6K1Q92551 441 aa17.13■□□□□ 0.33
CCDC85C-202ENST00000554877 ERBB3P21860 1342 aa17.13■□□□□ 0.33
CCDC85C-202ENST00000554877 CCDC7Q96M83 1385 aa17.13■□□□□ 0.33
CCDC85C-202ENST00000554877 NINLQ9Y2I6 1382 aa17.13■□□□□ 0.33
CCDC85C-202ENST00000554877 OVOS2A0A0G2JMS6 1433 aa17.13■□□□□ 0.33
CCDC85C-202ENST00000554877 OVOS2A0A0J9YW53 1432 aa17.13■□□□□ 0.33
CCDC85C-202ENST00000554877 OVOS2Q6IE36 1432 aa17.13■□□□□ 0.33
CCDC85C-202ENST00000554877 IL2RBP14784 551 aa17.12■□□□□ 0.33
CCDC85C-202ENST00000554877 FYB1O15117 783 aa17.11■□□□□ 0.33
CCDC85C-202ENST00000554877 DDX54Q8TDD1 881 aaKnown RBP17.11■□□□□ 0.33
CCDC85C-202ENST00000554877 BCL11BQ9C0K0 894 aaPredicted RBP17.11■□□□□ 0.33
CCDC85C-202ENST00000554877 MAP3K19Q56UN5 1328 aa17.11■□□□□ 0.33
CCDC85C-202ENST00000554877 ANKRD36BQ8N2N9 1353 aa17.11■□□□□ 0.33
CCDC85C-202ENST00000554877 DISP2A7MBM2 1401 aa17.1■□□□□ 0.33
CCDC85C-202ENST00000554877 KCNQ2O43526 872 aa17.09■□□□□ 0.33
CCDC85C-202ENST00000554877 HOXC9P31274 260 aa17.09■□□□□ 0.33
CCDC85C-202ENST00000554877 TNS1Q9HBL0 1735 aaKnown RBP17.09■□□□□ 0.33
CCDC85C-202ENST00000554877 PARP4Q9UKK3 1724 aaKnown RBP17.08■□□□□ 0.32
CCDC85C-202ENST00000554877 PPM1GO15355 546 aaPredicted RBP17.07■□□□□ 0.32
CCDC85C-202ENST00000554877 CARD14Q9BXL6 1004 aa17.07■□□□□ 0.32
CCDC85C-202ENST00000554877 PARD3Q8TEW0 1356 aa17.06■□□□□ 0.32
CCDC85C-202ENST00000554877 HSPA5P11021 654 aaKnown RBP17.06■□□□□ 0.32
CCDC85C-202ENST00000554877 USHBP1Q8N6Y0 703 aa17.06■□□□□ 0.32
CCDC85C-202ENST00000554877 LRRC37A3O60309 1634 aa17.06■□□□□ 0.32
CCDC85C-202ENST00000554877 PLSCR1O15162 318 aa17.05■□□□□ 0.32
CCDC85C-202ENST00000554877 EIF4G2P78344 907 aaKnown RBP eCLIP17.05■□□□□ 0.32
CCDC85C-202ENST00000554877 LTN1O94822 1766 aa17.05■□□□□ 0.32
CCDC85C-202ENST00000554877 SYTL4Q96C24 671 aaPredicted RBP17.04■□□□□ 0.32
CCDC85C-202ENST00000554877 TNNT2P45379 298 aaPredicted RBP17.03■□□□□ 0.32
CCDC85C-202ENST00000554877 PROM2Q8N271 834 aa17.03■□□□□ 0.32
CCDC85C-202ENST00000554877 TXNRD1Q16881 649 aa17.02■□□□□ 0.32
CCDC85C-202ENST00000554877 HSP90AB2PQ58FF8 381 aa17.02■□□□□ 0.32
CCDC85C-202ENST00000554877 NBPF6Q5VWK0 638 aa17.02■□□□□ 0.32
CCDC85C-202ENST00000554877 NBPF4Q96M43 638 aa17.02■□□□□ 0.32
CCDC85C-202ENST00000554877 NSD3Q9BZ95 1437 aa17.02■□□□□ 0.31
CCDC85C-202ENST00000554877 TNS2Q63HR2 1409 aa17.01■□□□□ 0.31
CCDC85C-202ENST00000554877 KAT6BQ8WYB5 2073 aa17.01■□□□□ 0.31
CCDC85C-202ENST00000554877 ABCC6O95255 1503 aa17.01■□□□□ 0.31
CCDC85C-202ENST00000554877 SRCAPQ6ZRS2 3230 aa17■□□□□ 0.31
CCDC85C-202ENST00000554877 ZCRB1Q8TBF4 217 aaKnown RBP17■□□□□ 0.31
CCDC85C-202ENST00000554877 ANO8Q9HCE9 1232 aaPredicted RBP17■□□□□ 0.31
CCDC85C-202ENST00000554877 STK32BQ9NY57 414 aa17■□□□□ 0.31
CCDC85C-202ENST00000554877 PPP1R1BQ9UD71 204 aaPredicted RBP17■□□□□ 0.31
CCDC85C-202ENST00000554877 EMILIN1Q9Y6C2 1016 aa17■□□□□ 0.31
CCDC85C-202ENST00000554877 PEAK1Q9H792 1746 aa16.99■□□□□ 0.31
CCDC85C-202ENST00000554877 RAPGEF4Q8WZA2 1011 aa16.99■□□□□ 0.31
CCDC85C-202ENST00000554877 TATP17735 454 aaPredicted RBP16.97■□□□□ 0.31
CCDC85C-202ENST00000554877 PRIM1P49642 420 aaKnown RBP16.97■□□□□ 0.31
CCDC85C-202ENST00000554877 PDGFDQ9GZP0 370 aaPredicted RBP16.97■□□□□ 0.31
CCDC85C-202ENST00000554877 PANK3Q9H999 370 aa16.97■□□□□ 0.31
CCDC85C-202ENST00000554877 SPON1Q9HCB6 807 aa16.97■□□□□ 0.31
CCDC85C-202ENST00000554877 WNK3Q9BYP7 1800 aa16.97■□□□□ 0.31
CCDC85C-202ENST00000554877 CGNL1Q0VF96 1302 aa16.96■□□□□ 0.31
CCDC85C-202ENST00000554877 SBF2Q86WG5 1849 aa16.96■□□□□ 0.31
CCDC85C-202ENST00000554877 ZBTB7AO95365 584 aa16.96■□□□□ 0.31
CCDC85C-202ENST00000554877 ATF5Q9Y2D1 282 aaPredicted RBP16.96■□□□□ 0.31
CCDC85C-202ENST00000554877 BCL9O00512 1426 aa16.96■□□□□ 0.3
CCDC85C-202ENST00000554877 SMG6Q86US8 1419 aaKnown RBP16.96■□□□□ 0.3
CCDC85C-202ENST00000554877 KCNQ4P56696 695 aa16.95■□□□□ 0.3
CCDC85C-202ENST00000554877 KIF20BQ96Q89 1820 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms