RNA–Protein interactions for RNA: ENST00000554844.1

TMEM253-204, Transcript of transmembrane protein 253, humanhuman

TSL 4

Gene TMEM253, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-204ENST00000554844 AATKQ6ZMQ8 1374 aa13.89□□□□□ -0.19
TMEM253-204ENST00000554844 KCNQ2O43526 872 aa13.89□□□□□ -0.19
TMEM253-204ENST00000554844 CDCA7Q9BWT1 371 aaPredicted RBP13.89□□□□□ -0.19
TMEM253-204ENST00000554844 CABP1Q9NZU7 370 aa13.89□□□□□ -0.19
TMEM253-204ENST00000554844 EVC2Q86UK5 1308 aa13.89□□□□□ -0.19
TMEM253-204ENST00000554844 CSB-PGBD3P0DP91 1061 aa13.88□□□□□ -0.19
TMEM253-204ENST00000554844 NINLQ9Y2I6 1382 aa13.87□□□□□ -0.19
TMEM253-204ENST00000554844 RGPD3A6NKT7 1758 aaPredicted RBP13.87□□□□□ -0.19
TMEM253-204ENST00000554844 RGPD4Q7Z3J3 1758 aa13.87□□□□□ -0.19
TMEM253-204ENST00000554844 SLIT3O75094 1523 aa13.87□□□□□ -0.19
TMEM253-204ENST00000554844 BCL11BQ9C0K0 894 aaPredicted RBP13.87□□□□□ -0.19
TMEM253-204ENST00000554844 LRRC37A3O60309 1634 aa13.86□□□□□ -0.19
TMEM253-204ENST00000554844 PLSCR1O15162 318 aa13.86□□□□□ -0.19
TMEM253-204ENST00000554844 KCNH5Q8NCM2 988 aa13.86□□□□□ -0.19
TMEM253-204ENST00000554844 WDR17Q8IZU2 1322 aa13.86□□□□□ -0.19
TMEM253-204ENST00000554844 CPSF1Q10570 1443 aaKnown RBP13.85□□□□□ -0.19
TMEM253-204ENST00000554844 ZNF692Q9BU19 519 aaPredicted RBP13.85□□□□□ -0.19
TMEM253-204ENST00000554844 AKAP12Q02952 1782 aa13.84□□□□□ -0.19
TMEM253-204ENST00000554844 TRPM1Q7Z4N2 1603 aa13.84□□□□□ -0.19
TMEM253-204ENST00000554844 SOX12O15370 315 aa13.84□□□□□ -0.19
TMEM253-204ENST00000554844 PEAK1Q9H792 1746 aa13.84□□□□□ -0.19
TMEM253-204ENST00000554844 WNK3Q9BYP7 1800 aa13.83□□□□□ -0.2
TMEM253-204ENST00000554844 PIK3C2AO00443 1686 aa13.83□□□□□ -0.2
TMEM253-204ENST00000554844 STK32BQ9NY57 414 aa13.83□□□□□ -0.2
TMEM253-204ENST00000554844 TTC21AQ8NDW8 1320 aa13.83□□□□□ -0.2
TMEM253-204ENST00000554844 SBF2Q86WG5 1849 aa13.83□□□□□ -0.2
TMEM253-204ENST00000554844 EXOC5O00471 708 aa13.82□□□□□ -0.2
TMEM253-204ENST00000554844 ROCK2O75116 1388 aaKnown RBP13.82□□□□□ -0.2
TMEM253-204ENST00000554844 CARD10Q9BWT7 1032 aa13.81□□□□□ -0.2
TMEM253-204ENST00000554844 TTC21BQ7Z4L5 1316 aa13.81□□□□□ -0.2
TMEM253-204ENST00000554844 CCDC7Q96M83 1385 aa13.81□□□□□ -0.2
TMEM253-204ENST00000554844 ARHGEF25Q86VW2 580 aa13.8□□□□□ -0.2
TMEM253-204ENST00000554844 MARCH10Q8NA82 808 aaPredicted RBP13.8□□□□□ -0.2
TMEM253-204ENST00000554844 ANO8Q9HCE9 1232 aaPredicted RBP13.8□□□□□ -0.2
TMEM253-204ENST00000554844 COL18A1P39060 1754 aa13.8□□□□□ -0.2
TMEM253-204ENST00000554844 BCL9O00512 1426 aa13.8□□□□□ -0.2
TMEM253-204ENST00000554844 L3MBTL2Q969R5 705 aa13.79□□□□□ -0.2
TMEM253-204ENST00000554844 AXIN2Q9Y2T1 843 aa13.79□□□□□ -0.2
TMEM253-204ENST00000554844 KTN1Q86UP2 1357 aaKnown RBP13.79□□□□□ -0.2
TMEM253-204ENST00000554844 ZBTB7AO95365 584 aa13.78□□□□□ -0.2
TMEM253-204ENST00000554844 ABCC6O95255 1503 aa13.78□□□□□ -0.2
TMEM253-204ENST00000554844 CASZ1Q86V15 1759 aa13.78□□□□□ -0.2
TMEM253-204ENST00000554844 TXNRD1Q16881 649 aa13.77□□□□□ -0.21
TMEM253-204ENST00000554844 TNS2Q63HR2 1409 aa13.77□□□□□ -0.21
TMEM253-204ENST00000554844 RGPD5Q99666 1765 aa13.77□□□□□ -0.21
TMEM253-204ENST00000554844 ATF5Q9Y2D1 282 aaPredicted RBP13.76□□□□□ -0.21
TMEM253-204ENST00000554844 NEUROD1Q13562 356 aa13.75□□□□□ -0.21
TMEM253-204ENST00000554844 SLC15A2Q16348 729 aa13.75□□□□□ -0.21
TMEM253-204ENST00000554844 PTF1AQ7RTS3 328 aa13.75□□□□□ -0.21
TMEM253-204ENST00000554844 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.75□□□□□ -0.21
TMEM253-204ENST00000554844 NLRP2Q9NX02 1062 aa13.75□□□□□ -0.21
TMEM253-204ENST00000554844 NFAT5O94916 1531 aa13.74□□□□□ -0.21
TMEM253-204ENST00000554844 HDGFL2Q7Z4V5 671 aaPredicted RBP13.74□□□□□ -0.21
TMEM253-204ENST00000554844 MTFR1LQ9H019 292 aa13.74□□□□□ -0.21
TMEM253-204ENST00000554844 MYOM1P52179 1685 aa13.74□□□□□ -0.21
TMEM253-204ENST00000554844 PROM2Q8N271 834 aa13.73□□□□□ -0.21
TMEM253-204ENST00000554844 TMC1Q8TDI8 760 aa13.73□□□□□ -0.21
TMEM253-204ENST00000554844 ACSBG1Q96GR2 724 aa13.73□□□□□ -0.21
TMEM253-204ENST00000554844 NHSQ6T4R5 1651 aa13.72□□□□□ -0.21
TMEM253-204ENST00000554844 IL2RBP14784 551 aa13.72□□□□□ -0.21
TMEM253-204ENST00000554844 PDGFDQ9GZP0 370 aaPredicted RBP13.72□□□□□ -0.21
TMEM253-204ENST00000554844 MON2Q7Z3U7 1717 aa13.72□□□□□ -0.21
TMEM253-204ENST00000554844 ERBB3P21860 1342 aa13.71□□□□□ -0.21
TMEM253-204ENST00000554844 FHDC1Q9C0D6 1143 aaPredicted RBP13.71□□□□□ -0.21
TMEM253-204ENST00000554844 KAT6BQ8WYB5 2073 aa13.7□□□□□ -0.22
TMEM253-204ENST00000554844 PTGER2P43116 358 aa13.7□□□□□ -0.22
TMEM253-204ENST00000554844 ANKRD24Q8TF21 1146 aa13.7□□□□□ -0.22
TMEM253-204ENST00000554844 SIN3AQ96ST3 1273 aa13.7□□□□□ -0.22
TMEM253-204ENST00000554844 USP31Q70CQ4 1352 aa13.7□□□□□ -0.22
TMEM253-204ENST00000554844 LTN1O94822 1766 aa13.69□□□□□ -0.22
TMEM253-204ENST00000554844 SLC4A2P04920 1241 aa13.69□□□□□ -0.22
TMEM253-204ENST00000554844 NME9Q86XW9 330 aa13.69□□□□□ -0.22
TMEM253-204ENST00000554844 SYT17Q9BSW7 474 aa13.69□□□□□ -0.22
TMEM253-204ENST00000554844 CARD11Q9BXL7 1154 aa13.69□□□□□ -0.22
TMEM253-204ENST00000554844 TERF2IPQ9NYB0 399 aa13.69□□□□□ -0.22
TMEM253-204ENST00000554844 SBNO2Q9Y2G9 1366 aa13.69□□□□□ -0.22
TMEM253-204ENST00000554844 ARXQ96QS3 562 aa13.68□□□□□ -0.22
TMEM253-204ENST00000554844 USP54Q70EL1 1684 aa13.68□□□□□ -0.22
TMEM253-204ENST00000554844 EDC4Q6P2E9 1401 aaKnown RBP13.67□□□□□ -0.22
TMEM253-204ENST00000554844 BTAF1O14981 1849 aa13.67□□□□□ -0.22
TMEM253-204ENST00000554844 POLD1P28340 1107 aa13.66□□□□□ -0.22
TMEM253-204ENST00000554844 KLHL34Q8N239 644 aa13.66□□□□□ -0.22
TMEM253-204ENST00000554844 ZNF784Q8NCA9 323 aaPredicted RBP13.66□□□□□ -0.22
TMEM253-204ENST00000554844 SLC27A3Q5K4L6 730 aa13.65□□□□□ -0.22
TMEM253-204ENST00000554844 CHD4Q14839 1912 aa13.64□□□□□ -0.23
TMEM253-204ENST00000554844 FAM208AQ9UK61 1670 aaKnown RBP13.64□□□□□ -0.23
TMEM253-204ENST00000554844 GPR162Q16538 588 aa13.64□□□□□ -0.23
TMEM253-204ENST00000554844 DDX54Q8TDD1 881 aaKnown RBP13.64□□□□□ -0.23
TMEM253-204ENST00000554844 SYTL4Q96C24 671 aaPredicted RBP13.64□□□□□ -0.23
TMEM253-204ENST00000554844 LTV1Q96GA3 475 aaPredicted RBP13.64□□□□□ -0.23
TMEM253-204ENST00000554844 PAPPAQ13219 1627 aa13.64□□□□□ -0.23
TMEM253-204ENST00000554844 MAP3K5Q99683 1374 aa13.63□□□□□ -0.23
TMEM253-204ENST00000554844 SLC16A10Q8TF71 515 aa13.63□□□□□ -0.23
TMEM253-204ENST00000554844 SLC12A5Q9H2X9 1139 aa13.63□□□□□ -0.23
TMEM253-204ENST00000554844 CD163L1Q9NR16 1453 aa13.62□□□□□ -0.23
TMEM253-204ENST00000554844 A0A1W2PP64 1363 aa13.62□□□□□ -0.23
TMEM253-204ENST00000554844 TONSLQ96HA7 1378 aa13.62□□□□□ -0.23
TMEM253-204ENST00000554844 ZNF827Q17R98 1081 aa13.62□□□□□ -0.23
TMEM253-204ENST00000554844 PELP1Q8IZL8 1130 aaKnown RBP13.62□□□□□ -0.23
TMEM253-204ENST00000554844 IP6K1Q92551 441 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms