RNA–Protein interactions for RNA: ENST00000554822.5

LINC01550-204, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 3

Gene LINC01550, Length 852 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-204ENST00000554822 IRF5Q13568 498 aa9.87□□□□□ -0.83
LINC01550-204ENST00000554822 PCDHB9Q9Y5E1 797 aa9.87□□□□□ -0.83
LINC01550-204ENST00000554822 POM121Q96HA1 1249 aa9.86□□□□□ -0.83
LINC01550-204ENST00000554822 CDV3Q9UKY7 258 aaKnown RBP9.86□□□□□ -0.83
LINC01550-204ENST00000554822 COG6Q9Y2V7 657 aa9.86□□□□□ -0.83
LINC01550-204ENST00000554822 CAPN5O15484 640 aaPredicted RBP9.85□□□□□ -0.83
LINC01550-204ENST00000554822 WDR4P57081 412 aaKnown RBP9.85□□□□□ -0.83
LINC01550-204ENST00000554822 KLF16Q9BXK1 252 aaPredicted RBP9.84□□□□□ -0.83
LINC01550-204ENST00000554822 TIMP2P16035 220 aa9.83□□□□□ -0.84
LINC01550-204ENST00000554822 UBTFP17480 764 aaKnown RBP9.83□□□□□ -0.84
LINC01550-204ENST00000554822 RAB15P59190 212 aa9.83□□□□□ -0.84
LINC01550-204ENST00000554822 CCDC116Q8IYX3 515 aa9.83□□□□□ -0.84
LINC01550-204ENST00000554822 ZIC2O95409 532 aaPredicted RBP9.82□□□□□ -0.84
LINC01550-204ENST00000554822 VAC14Q08AM6 782 aa9.82□□□□□ -0.84
LINC01550-204ENST00000554822 NBPF20Q3BBV1 942 aa9.82□□□□□ -0.84
LINC01550-204ENST00000554822 INTS6LQ5JSJ4 861 aaKnown RBP9.82□□□□□ -0.84
LINC01550-204ENST00000554822 ITPKCQ96DU7 683 aa9.82□□□□□ -0.84
LINC01550-204ENST00000554822 ZFAND3Q9H8U3 227 aa9.82□□□□□ -0.84
LINC01550-204ENST00000554822 ZNF330Q9Y3S2 320 aaPredicted RBP9.82□□□□□ -0.84
LINC01550-204ENST00000554822 GIGYF1O75420 1035 aaPredicted RBP9.81□□□□□ -0.84
LINC01550-204ENST00000554822 PPP1R26Q5T8A7 1209 aaPredicted RBP9.81□□□□□ -0.84
LINC01550-204ENST00000554822 POTECB2RU33 542 aa9.8□□□□□ -0.84
LINC01550-204ENST00000554822 ZNF787Q6DD87 383 aa9.8□□□□□ -0.84
LINC01550-204ENST00000554822 ATP13A2Q9NQ11 1180 aa9.8□□□□□ -0.84
LINC01550-204ENST00000554822 ESPNB1AK53 854 aa9.79□□□□□ -0.84
LINC01550-204ENST00000554822 RAD21O60216 631 aa9.79□□□□□ -0.84
LINC01550-204ENST00000554822 BMP1P13497 986 aa9.79□□□□□ -0.84
LINC01550-204ENST00000554822 EMILIN1Q9Y6C2 1016 aa9.79□□□□□ -0.84
LINC01550-204ENST00000554822 DHX9Q08211 1270 aaKnown RBP9.78□□□□□ -0.84
LINC01550-204ENST00000554822 TMPRSS4Q9NRS4 437 aa9.78□□□□□ -0.84
LINC01550-204ENST00000554822 GMPR2Q9P2T1 348 aaKnown RBP9.78□□□□□ -0.84
LINC01550-204ENST00000554822 ERVH48-1M5A8F1 160 aa9.77□□□□□ -0.85
LINC01550-204ENST00000554822 MCCD1P59942 119 aaPredicted RBP9.77□□□□□ -0.85
LINC01550-204ENST00000554822 EIF4G2P78344 907 aaKnown RBP eCLIP9.77□□□□□ -0.85
LINC01550-204ENST00000554822 WASHC4Q2M389 1173 aa9.77□□□□□ -0.85
LINC01550-204ENST00000554822 CLUAP1Q96AJ1 413 aa9.77□□□□□ -0.85
LINC01550-204ENST00000554822 PGPEP1Q9NXJ5 209 aa9.77□□□□□ -0.85
LINC01550-204ENST00000554822 TRIM46Q7Z4K8 759 aa9.76□□□□□ -0.85
LINC01550-204ENST00000554822 ZNF592Q92610 1267 aa9.75□□□□□ -0.85
LINC01550-204ENST00000554822 CEP126Q9P2H0 1117 aa9.75□□□□□ -0.85
LINC01550-204ENST00000554822 CBLBQ13191 982 aa9.74□□□□□ -0.85
LINC01550-204ENST00000554822 SEPT12Q8IYM1 358 aa9.74□□□□□ -0.85
LINC01550-204ENST00000554822 MRPL14Q6P1L8 145 aaKnown RBP9.73□□□□□ -0.85
LINC01550-204ENST00000554822 WWC1Q8IX03 1113 aa9.73□□□□□ -0.85
LINC01550-204ENST00000554822 ZNF784Q8NCA9 323 aaPredicted RBP9.73□□□□□ -0.85
LINC01550-204ENST00000554822 PURBQ96QR8 312 aaKnown RBP9.72□□□□□ -0.85
LINC01550-204ENST00000554822 C11orf95C9JLR9 678 aaPredicted RBP9.71□□□□□ -0.86
LINC01550-204ENST00000554822 SEMA3FQ13275 785 aa9.71□□□□□ -0.86
LINC01550-204ENST00000554822 RNF20Q5VTR2 975 aa9.71□□□□□ -0.86
LINC01550-204ENST00000554822 MEIOBQ8N635 442 aa9.71□□□□□ -0.86
LINC01550-204ENST00000554822 ZFP42Q96MM3 310 aa9.71□□□□□ -0.86
LINC01550-204ENST00000554822 LILRA1O75019 489 aa9.7□□□□□ -0.86
LINC01550-204ENST00000554822 C6orf118Q5T5N4 469 aa9.7□□□□□ -0.86
LINC01550-204ENST00000554822 Q6ZVU0 165 aa9.7□□□□□ -0.86
LINC01550-204ENST00000554822 CYLDQ9NQC7 956 aa9.7□□□□□ -0.86
LINC01550-204ENST00000554822 GTF3C3Q9Y5Q9 886 aa9.7□□□□□ -0.86
LINC01550-204ENST00000554822 POM121CA8CG34 1229 aa9.69□□□□□ -0.86
LINC01550-204ENST00000554822 SNRPBP14678 240 aaKnown RBP9.69□□□□□ -0.86
LINC01550-204ENST00000554822 ADD1P35611 737 aaKnown RBP9.69□□□□□ -0.86
LINC01550-204ENST00000554822 SCARF1Q14162 830 aa9.69□□□□□ -0.86
LINC01550-204ENST00000554822 TSGA10IPQ3SY00 556 aa9.69□□□□□ -0.86
LINC01550-204ENST00000554822 SENP2Q9HC62 589 aa9.69□□□□□ -0.86
LINC01550-204ENST00000554822 PCDHB11Q9Y5F2 797 aa9.69□□□□□ -0.86
LINC01550-204ENST00000554822 ABCC9O60706 1549 aa9.68□□□□□ -0.86
LINC01550-204ENST00000554822 BMP2P12643 396 aa9.68□□□□□ -0.86
LINC01550-204ENST00000554822 PROSER2Q86WR7 435 aaPredicted RBP9.68□□□□□ -0.86
LINC01550-204ENST00000554822 LINC00528Q8N1L1 170 aa9.68□□□□□ -0.86
LINC01550-204ENST00000554822 ZNF775Q96BV0 537 aaPredicted RBP9.68□□□□□ -0.86
LINC01550-204ENST00000554822 TRIM47Q96LD4 638 aa9.68□□□□□ -0.86
LINC01550-204ENST00000554822 AGBL1Q96MI9 1066 aa9.68□□□□□ -0.86
LINC01550-204ENST00000554822 CCDC85AQ96PX6 553 aaPredicted RBP9.68□□□□□ -0.86
LINC01550-204ENST00000554822 UPP2O95045 317 aa9.67□□□□□ -0.86
LINC01550-204ENST00000554822 SOX11P35716 441 aa9.67□□□□□ -0.86
LINC01550-204ENST00000554822 SLFNL1Q499Z3 407 aa9.67□□□□□ -0.86
LINC01550-204ENST00000554822 CCDC125Q86Z20 511 aa9.67□□□□□ -0.86
LINC01550-204ENST00000554822 PHTF2Q8N3S3 785 aa9.67□□□□□ -0.86
LINC01550-204ENST00000554822 FNBP4Q8N3X1 1017 aaPredicted RBP9.67□□□□□ -0.86
LINC01550-204ENST00000554822 TSEN34Q9BSV6 310 aaKnown RBP9.67□□□□□ -0.86
LINC01550-204ENST00000554822 ALG2Q9H553 416 aa9.67□□□□□ -0.86
LINC01550-204ENST00000554822 SCTRP47872 440 aa9.66□□□□□ -0.86
LINC01550-204ENST00000554822 RELBQ01201 579 aa9.66□□□□□ -0.86
LINC01550-204ENST00000554822 RNF135Q8IUD6 432 aa9.66□□□□□ -0.86
LINC01550-204ENST00000554822 KIFC2Q96AC6 838 aa9.66□□□□□ -0.86
LINC01550-204ENST00000554822 CDCA7Q9BWT1 371 aaPredicted RBP9.66□□□□□ -0.86
LINC01550-204ENST00000554822 A6NJR5 290 aa9.65□□□□□ -0.86
LINC01550-204ENST00000554822 ERVK-9P63128 1117 aa9.65□□□□□ -0.86
LINC01550-204ENST00000554822 CC2D2BQ6DHV5 1058 aa9.64□□□□□ -0.87
LINC01550-204ENST00000554822 ADAMTS19Q8TE59 1207 aa9.64□□□□□ -0.87
LINC01550-204ENST00000554822 ZNF395Q9H8N7 513 aaPredicted RBP9.64□□□□□ -0.87
LINC01550-204ENST00000554822 PIK3CDO00329 1044 aa9.63□□□□□ -0.87
LINC01550-204ENST00000554822 ADH1AP07327 375 aa9.63□□□□□ -0.87
LINC01550-204ENST00000554822 HDGFL1Q5TGJ6 251 aa9.63□□□□□ -0.87
LINC01550-204ENST00000554822 KDF1Q8NAX2 398 aaPredicted RBP9.63□□□□□ -0.87
LINC01550-204ENST00000554822 TRIM52Q96A61 297 aa9.62□□□□□ -0.87
LINC01550-204ENST00000554822 DOLKQ9UPQ8 538 aa9.62□□□□□ -0.87
LINC01550-204ENST00000554822 SOBPA7XYQ1 873 aa9.61□□□□□ -0.87
LINC01550-204ENST00000554822 PTGIRP43119 386 aa9.61□□□□□ -0.87
LINC01550-204ENST00000554822 ESF1Q9H501 851 aaKnown RBP9.61□□□□□ -0.87
LINC01550-204ENST00000554822 ATP5J2-PTCD1G3V325 749 aa9.6□□□□□ -0.87
LINC01550-204ENST00000554822 SPINT1O43278 529 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms