RNA–Protein interactions for RNA: ENST00000554722.1

GABRB3-207, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 3

Gene GABRB3, Length 406 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-207ENST00000554722 USP54Q70EL1 1684 aa22.2■■□□□ 1.15
GABRB3-207ENST00000554722 TTC21AQ8NDW8 1320 aa22.2■■□□□ 1.14
GABRB3-207ENST00000554722 CRB1P82279 1406 aa22.2■■□□□ 1.14
GABRB3-207ENST00000554722 C11orf95C9JLR9 678 aaPredicted RBP22.19■■□□□ 1.14
GABRB3-207ENST00000554722 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.19■■□□□ 1.14
GABRB3-207ENST00000554722 NFAT5O94916 1531 aa22.18■■□□□ 1.14
GABRB3-207ENST00000554722 SOX12O15370 315 aa22.18■■□□□ 1.14
GABRB3-207ENST00000554722 AXIN2Q9Y2T1 843 aa22.18■■□□□ 1.14
GABRB3-207ENST00000554722 LTN1O94822 1766 aa22.17■■□□□ 1.14
GABRB3-207ENST00000554722 NME9Q86XW9 330 aa22.16■■□□□ 1.14
GABRB3-207ENST00000554722 KCNH5Q8NCM2 988 aa22.16■■□□□ 1.14
GABRB3-207ENST00000554722 WNK3Q9BYP7 1800 aa22.15■■□□□ 1.14
GABRB3-207ENST00000554722 A0A1W2PP64 1363 aa22.15■■□□□ 1.14
GABRB3-207ENST00000554722 USP47Q96K76 1375 aa22.15■■□□□ 1.14
GABRB3-207ENST00000554722 TOM1L2Q6ZVM7 507 aa22.15■■□□□ 1.14
GABRB3-207ENST00000554722 ARHGEF25Q86VW2 580 aa22.15■■□□□ 1.14
GABRB3-207ENST00000554722 PUS7Q96PZ0 661 aaKnown RBP22.15■■□□□ 1.14
GABRB3-207ENST00000554722 PARP4Q9UKK3 1724 aaKnown RBP22.14■■□□□ 1.13
GABRB3-207ENST00000554722 USP31Q70CQ4 1352 aa22.13■■□□□ 1.13
GABRB3-207ENST00000554722 WDR17Q8IZU2 1322 aa22.12■■□□□ 1.13
GABRB3-207ENST00000554722 CLSPNQ9HAW4 1339 aa22.12■■□□□ 1.13
GABRB3-207ENST00000554722 DDB1Q16531 1140 aa22.12■■□□□ 1.13
GABRB3-207ENST00000554722 NBPF14Q5TI25 921 aa22.12■■□□□ 1.13
GABRB3-207ENST00000554722 HDGFL2Q7Z4V5 671 aaPredicted RBP22.12■■□□□ 1.13
GABRB3-207ENST00000554722 OVOS2A0A0G2JMS6 1433 aa22.12■■□□□ 1.13
GABRB3-207ENST00000554722 OVOS2A0A0J9YW53 1432 aa22.12■■□□□ 1.13
GABRB3-207ENST00000554722 OVOS2Q6IE36 1432 aa22.12■■□□□ 1.13
GABRB3-207ENST00000554722 EDC4Q6P2E9 1401 aaKnown RBP22.11■■□□□ 1.13
GABRB3-207ENST00000554722 CDCA7Q9BWT1 371 aaPredicted RBP22.1■■□□□ 1.13
GABRB3-207ENST00000554722 CSB-PGBD3P0DP91 1061 aa22.08■■□□□ 1.13
GABRB3-207ENST00000554722 TERF2IPQ9NYB0 399 aa22.08■■□□□ 1.13
GABRB3-207ENST00000554722 TIMELESSQ9UNS1 1208 aa22.08■■□□□ 1.13
GABRB3-207ENST00000554722 LRRC37A3O60309 1634 aa22.08■■□□□ 1.13
GABRB3-207ENST00000554722 RREB1Q92766 1687 aa22.07■■□□□ 1.12
GABRB3-207ENST00000554722 SBF2Q86WG5 1849 aa22.06■■□□□ 1.12
GABRB3-207ENST00000554722 CARD10Q9BWT7 1032 aa22.06■■□□□ 1.12
GABRB3-207ENST00000554722 MYOM1P52179 1685 aa22.06■■□□□ 1.12
GABRB3-207ENST00000554722 NINLQ9Y2I6 1382 aa22.05■■□□□ 1.12
GABRB3-207ENST00000554722 TMF1P82094 1093 aa22.05■■□□□ 1.12
GABRB3-207ENST00000554722 PEAK1Q9H792 1746 aa22.05■■□□□ 1.12
GABRB3-207ENST00000554722 NUP188Q5SRE5 1749 aa22.03■■□□□ 1.12
GABRB3-207ENST00000554722 ABCC6O95255 1503 aa22.03■■□□□ 1.12
GABRB3-207ENST00000554722 PLSCR1O15162 318 aa22.03■■□□□ 1.12
GABRB3-207ENST00000554722 ANKRD36BQ8N2N9 1353 aa22.02■■□□□ 1.12
GABRB3-207ENST00000554722 SLC24A1O60721 1099 aa22.02■■□□□ 1.12
GABRB3-207ENST00000554722 MARCH10Q8NA82 808 aaPredicted RBP22.02■■□□□ 1.12
GABRB3-207ENST00000554722 CCER1Q8TC90 406 aaPredicted RBP22.02■■□□□ 1.12
GABRB3-207ENST00000554722 BCL11BQ9C0K0 894 aaPredicted RBP22.02■■□□□ 1.12
GABRB3-207ENST00000554722 FBLN1P23142 703 aa22.01■■□□□ 1.11
GABRB3-207ENST00000554722 CCDC7Q96M83 1385 aa22■■□□□ 1.11
GABRB3-207ENST00000554722 EXOC5O00471 708 aa22■■□□□ 1.11
GABRB3-207ENST00000554722 KIF20BQ96Q89 1820 aa22■■□□□ 1.11
GABRB3-207ENST00000554722 RGPD2P0DJD1 1756 aa21.99■■□□□ 1.11
GABRB3-207ENST00000554722 BCL9O00512 1426 aa21.99■■□□□ 1.11
GABRB3-207ENST00000554722 SPON1Q9HCB6 807 aa21.97■■□□□ 1.11
GABRB3-207ENST00000554722 ERBB3P21860 1342 aa21.97■■□□□ 1.11
GABRB3-207ENST00000554722 PTF1AQ7RTS3 328 aa21.96■■□□□ 1.11
GABRB3-207ENST00000554722 RGPD3A6NKT7 1758 aaPredicted RBP21.96■■□□□ 1.11
GABRB3-207ENST00000554722 RGPD4Q7Z3J3 1758 aa21.96■■□□□ 1.11
GABRB3-207ENST00000554722 NLRP2Q9NX02 1062 aa21.95■■□□□ 1.1
GABRB3-207ENST00000554722 FYB1O15117 783 aa21.94■■□□□ 1.1
GABRB3-207ENST00000554722 KCNQ2O43526 872 aa21.94■■□□□ 1.1
GABRB3-207ENST00000554722 COG3Q96JB2 828 aa21.94■■□□□ 1.1
GABRB3-207ENST00000554722 PPP1R1BQ9UD71 204 aaPredicted RBP21.94■■□□□ 1.1
GABRB3-207ENST00000554722 TNS2Q63HR2 1409 aa21.93■■□□□ 1.1
GABRB3-207ENST00000554722 ANKRD24Q8TF21 1146 aa21.93■■□□□ 1.1
GABRB3-207ENST00000554722 GGNBP2Q9H3C7 697 aa21.93■■□□□ 1.1
GABRB3-207ENST00000554722 CARD14Q9BXL6 1004 aa21.92■■□□□ 1.1
GABRB3-207ENST00000554722 MAP3K19Q56UN5 1328 aa21.91■■□□□ 1.1
GABRB3-207ENST00000554722 CDCA8Q53HL2 280 aa21.91■■□□□ 1.1
GABRB3-207ENST00000554722 IP6K1Q92551 441 aa21.91■■□□□ 1.1
GABRB3-207ENST00000554722 ANO8Q9HCE9 1232 aaPredicted RBP21.91■■□□□ 1.1
GABRB3-207ENST00000554722 FAM208AQ9UK61 1670 aaKnown RBP21.91■■□□□ 1.1
GABRB3-207ENST00000554722 IL2RBP14784 551 aa21.9■■□□□ 1.1
GABRB3-207ENST00000554722 PROM2Q8N271 834 aa21.9■■□□□ 1.1
GABRB3-207ENST00000554722 KAT6BQ8WYB5 2073 aa21.89■■□□□ 1.1
GABRB3-207ENST00000554722 HSPA5P11021 654 aaKnown RBP21.89■■□□□ 1.09
GABRB3-207ENST00000554722 HOXC9P31274 260 aa21.88■■□□□ 1.09
GABRB3-207ENST00000554722 RRS1Q15050 365 aaKnown RBP21.88■■□□□ 1.09
GABRB3-207ENST00000554722 TXNRD1Q16881 649 aa21.88■■□□□ 1.09
GABRB3-207ENST00000554722 LTV1Q96GA3 475 aaPredicted RBP21.88■■□□□ 1.09
GABRB3-207ENST00000554722 STK32BQ9NY57 414 aa21.87■■□□□ 1.09
GABRB3-207ENST00000554722 NSD3Q9BZ95 1437 aa21.87■■□□□ 1.09
GABRB3-207ENST00000554722 MAP2P11137 1827 aaKnown RBP21.86■■□□□ 1.09
GABRB3-207ENST00000554722 AMPHP49418 695 aa21.84■■□□□ 1.09
GABRB3-207ENST00000554722 EIF4G2P78344 907 aaKnown RBP eCLIP21.84■■□□□ 1.09
GABRB3-207ENST00000554722 ACSBG1Q96GR2 724 aa21.84■■□□□ 1.09
GABRB3-207ENST00000554722 POLR3GLQ9BT43 218 aa21.84■■□□□ 1.09
GABRB3-207ENST00000554722 SHANK3Q9BYB0 1731 aa21.83■■□□□ 1.09
GABRB3-207ENST00000554722 DCAF8L1A6NGE4 600 aa21.83■■□□□ 1.09
GABRB3-207ENST00000554722 SLC15A2Q16348 729 aa21.82■■□□□ 1.08
GABRB3-207ENST00000554722 NHSQ6T4R5 1651 aa21.81■■□□□ 1.08
GABRB3-207ENST00000554722 ANKRD26Q9UPS8 1709 aa21.8■■□□□ 1.08
GABRB3-207ENST00000554722 ZBTB7AO95365 584 aa21.8■■□□□ 1.08
GABRB3-207ENST00000554722 PDGFDQ9GZP0 370 aaPredicted RBP21.8■■□□□ 1.08
GABRB3-207ENST00000554722 CASZ1Q86V15 1759 aa21.79■■□□□ 1.08
GABRB3-207ENST00000554722 RTL1A6NKG5 1358 aa21.79■■□□□ 1.08
GABRB3-207ENST00000554722 BTAF1O14981 1849 aa21.78■■□□□ 1.08
GABRB3-207ENST00000554722 HSP90AB2PQ58FF8 381 aa21.77■■□□□ 1.08
GABRB3-207ENST00000554722 NBPF6Q5VWK0 638 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms