RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 BCL11BQ9C0K0 894 aaPredicted RBP34.7■■■■□ 3.15
FOXA1-204ENST00000554607 TRPM1Q7Z4N2 1603 aa34.7■■■■□ 3.14
FOXA1-204ENST00000554607 KCNQ2O43526 872 aa34.69■■■■□ 3.14
FOXA1-204ENST00000554607 PPP1R1BQ9UD71 204 aaPredicted RBP34.69■■■■□ 3.14
FOXA1-204ENST00000554607 TTC21AQ8NDW8 1320 aa34.69■■■■□ 3.14
FOXA1-204ENST00000554607 CPSF1Q10570 1443 aaKnown RBP34.69■■■■□ 3.14
FOXA1-204ENST00000554607 LRRC37A3O60309 1634 aa34.69■■■■□ 3.14
FOXA1-204ENST00000554607 ROCK2O75116 1388 aaKnown RBP34.67■■■■□ 3.14
FOXA1-204ENST00000554607 RGPD3A6NKT7 1758 aaPredicted RBP34.67■■■■□ 3.14
FOXA1-204ENST00000554607 RGPD4Q7Z3J3 1758 aa34.67■■■■□ 3.14
FOXA1-204ENST00000554607 CARD10Q9BWT7 1032 aa34.66■■■■□ 3.14
FOXA1-204ENST00000554607 SBF2Q86WG5 1849 aa34.66■■■■□ 3.14
FOXA1-204ENST00000554607 CSB-PGBD3P0DP91 1061 aa34.65■■■■□ 3.14
FOXA1-204ENST00000554607 BCL9O00512 1426 aa34.64■■■■□ 3.14
FOXA1-204ENST00000554607 MARCH10Q8NA82 808 aaPredicted RBP34.63■■■■□ 3.13
FOXA1-204ENST00000554607 SIN3AQ96ST3 1273 aa34.63■■■■□ 3.13
FOXA1-204ENST00000554607 SOX12O15370 315 aa34.62■■■■□ 3.13
FOXA1-204ENST00000554607 DCAF8L1A6NGE4 600 aa34.61■■■■□ 3.13
FOXA1-204ENST00000554607 AKAP12Q02952 1782 aa34.6■■■■□ 3.13
FOXA1-204ENST00000554607 WNK3Q9BYP7 1800 aa34.6■■■■□ 3.13
FOXA1-204ENST00000554607 EXOC5O00471 708 aa34.59■■■■□ 3.13
FOXA1-204ENST00000554607 NEUROD1Q13562 356 aa34.59■■■■□ 3.13
FOXA1-204ENST00000554607 KTN1Q86UP2 1357 aaKnown RBP34.59■■■■□ 3.13
FOXA1-204ENST00000554607 NINLQ9Y2I6 1382 aa34.58■■■■□ 3.13
FOXA1-204ENST00000554607 PTF1AQ7RTS3 328 aa34.57■■■■□ 3.12
FOXA1-204ENST00000554607 CCDC7Q96M83 1385 aa34.56■■■■□ 3.12
FOXA1-204ENST00000554607 RGPD5Q99666 1765 aa34.55■■■■□ 3.12
FOXA1-204ENST00000554607 YY1P25490 414 aa34.55■■■■□ 3.12
FOXA1-204ENST00000554607 ANO8Q9HCE9 1232 aaPredicted RBP34.55■■■■□ 3.12
FOXA1-204ENST00000554607 PROM2Q8N271 834 aa34.54■■■■□ 3.12
FOXA1-204ENST00000554607 NFAT5O94916 1531 aa34.52■■■■□ 3.12
FOXA1-204ENST00000554607 ABCC6O95255 1503 aa34.52■■■■□ 3.12
FOXA1-204ENST00000554607 SBNO2Q9Y2G9 1366 aa34.49■■■■□ 3.11
FOXA1-204ENST00000554607 TXNRD1Q16881 649 aa34.48■■■■□ 3.11
FOXA1-204ENST00000554607 STK32BQ9NY57 414 aa34.48■■■■□ 3.11
FOXA1-204ENST00000554607 USP31Q70CQ4 1352 aa34.48■■■■□ 3.11
FOXA1-204ENST00000554607 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.47■■■■□ 3.11
FOXA1-204ENST00000554607 CASZ1Q86V15 1759 aa34.46■■■■□ 3.11
FOXA1-204ENST00000554607 MON2Q7Z3U7 1717 aa34.44■■■■□ 3.1
FOXA1-204ENST00000554607 TNS2Q63HR2 1409 aa34.44■■■■□ 3.1
FOXA1-204ENST00000554607 ZBTB7AO95365 584 aa34.42■■■■□ 3.1
FOXA1-204ENST00000554607 SLC15A2Q16348 729 aa34.42■■■■□ 3.1
FOXA1-204ENST00000554607 HDGFL2Q7Z4V5 671 aaPredicted RBP34.42■■■■□ 3.1
FOXA1-204ENST00000554607 PDGFDQ9GZP0 370 aaPredicted RBP34.42■■■■□ 3.1
FOXA1-204ENST00000554607 NLRP2Q9NX02 1062 aa34.42■■■■□ 3.1
FOXA1-204ENST00000554607 ERBB3P21860 1342 aa34.41■■■■□ 3.1
FOXA1-204ENST00000554607 TMC1Q8TDI8 760 aa34.41■■■■□ 3.1
FOXA1-204ENST00000554607 CARD11Q9BXL7 1154 aa34.41■■■■□ 3.1
FOXA1-204ENST00000554607 NME9Q86XW9 330 aa34.4■■■■□ 3.1
FOXA1-204ENST00000554607 IL2RBP14784 551 aa34.38■■■■□ 3.09
FOXA1-204ENST00000554607 USP54Q70EL1 1684 aa34.37■■■■□ 3.09
FOXA1-204ENST00000554607 PTGER2P43116 358 aa34.36■■■■□ 3.09
FOXA1-204ENST00000554607 ATF5Q9Y2D1 282 aaPredicted RBP34.36■■■■□ 3.09
FOXA1-204ENST00000554607 CD163L1Q9NR16 1453 aa34.35■■■■□ 3.09
FOXA1-204ENST00000554607 ANKRD24Q8TF21 1146 aa34.34■■■■□ 3.09
FOXA1-204ENST00000554607 SLC12A5Q9H2X9 1139 aa34.34■■■■□ 3.09
FOXA1-204ENST00000554607 TERF2IPQ9NYB0 399 aa34.34■■■■□ 3.09
FOXA1-204ENST00000554607 ACSBG1Q96GR2 724 aa34.33■■■■□ 3.09
FOXA1-204ENST00000554607 NHSQ6T4R5 1651 aa34.32■■■■□ 3.08
FOXA1-204ENST00000554607 EDC4Q6P2E9 1401 aaKnown RBP34.32■■■■□ 3.08
FOXA1-204ENST00000554607 PUS7Q96PZ0 661 aaKnown RBP34.32■■■■□ 3.08
FOXA1-204ENST00000554607 MTFR1LQ9H019 292 aa34.32■■■■□ 3.08
FOXA1-204ENST00000554607 LTN1O94822 1766 aa34.3■■■■□ 3.08
FOXA1-204ENST00000554607 MYOM1P52179 1685 aa34.27■■■■□ 3.08
FOXA1-204ENST00000554607 SYT17Q9BSW7 474 aa34.24■■■■□ 3.07
FOXA1-204ENST00000554607 FHDC1Q9C0D6 1143 aaPredicted RBP34.24■■■■□ 3.07
FOXA1-204ENST00000554607 A0A1W2PP64 1363 aa34.23■■■■□ 3.07
FOXA1-204ENST00000554607 IP6K1Q92551 441 aa34.23■■■■□ 3.07
FOXA1-204ENST00000554607 SGIP1Q9BQI5 828 aa34.22■■■■□ 3.07
FOXA1-204ENST00000554607 KAT6BQ8WYB5 2073 aa34.21■■■■□ 3.07
FOXA1-204ENST00000554607 TONSLQ96HA7 1378 aa34.21■■■■□ 3.07
FOXA1-204ENST00000554607 BTAF1O14981 1849 aa34.19■■■■□ 3.06
FOXA1-204ENST00000554607 SLC24A1O60721 1099 aa34.18■■■■□ 3.06
FOXA1-204ENST00000554607 ARXQ96QS3 562 aa34.17■■■■□ 3.06
FOXA1-204ENST00000554607 PAPPAQ13219 1627 aa34.16■■■■□ 3.06
FOXA1-204ENST00000554607 DDX54Q8TDD1 881 aaKnown RBP34.16■■■■□ 3.06
FOXA1-204ENST00000554607 SLC27A3Q5K4L6 730 aa34.15■■■■□ 3.06
FOXA1-204ENST00000554607 LTV1Q96GA3 475 aaPredicted RBP34.15■■■■□ 3.06
FOXA1-204ENST00000554607 COG3Q96JB2 828 aa34.15■■■■□ 3.06
FOXA1-204ENST00000554607 LRRC4BQ9NT99 713 aa34.14■■■■□ 3.06
FOXA1-204ENST00000554607 ZNF827Q17R98 1081 aa34.13■■■■□ 3.05
FOXA1-204ENST00000554607 FAM208AQ9UK61 1670 aaKnown RBP34.12■■■■□ 3.05
FOXA1-204ENST00000554607 SLC16A10Q8TF71 515 aa34.1■■■■□ 3.05
FOXA1-204ENST00000554607 MAP3K5Q99683 1374 aa34.1■■■■□ 3.05
FOXA1-204ENST00000554607 AMPHP49418 695 aa34.09■■■■□ 3.05
FOXA1-204ENST00000554607 AKT1S1Q96B36 256 aa34.09■■■■□ 3.05
FOXA1-204ENST00000554607 TESK2Q96S53 571 aa34.09■■■■□ 3.05
FOXA1-204ENST00000554607 HOXC9P31274 260 aa34.08■■■■□ 3.05
FOXA1-204ENST00000554607 MAP3K19Q56UN5 1328 aa34.07■■■■□ 3.05
FOXA1-204ENST00000554607 ST20-MTHFSA0A0A6YYL1 179 aa34.07■■■■□ 3.04
FOXA1-204ENST00000554607 ZNF784Q8NCA9 323 aaPredicted RBP34.06■■■■□ 3.04
FOXA1-204ENST00000554607 SYTL4Q96C24 671 aaPredicted RBP34.05■■■■□ 3.04
FOXA1-204ENST00000554607 ANKRD36BQ8N2N9 1353 aa34.04■■■■□ 3.04
FOXA1-204ENST00000554607 PRIM1P49642 420 aaKnown RBP34.04■■■■□ 3.04
FOXA1-204ENST00000554607 POLD1P28340 1107 aa34.03■■■■□ 3.04
FOXA1-204ENST00000554607 ZCRB1Q8TBF4 217 aaKnown RBP34.03■■■■□ 3.04
FOXA1-204ENST00000554607 UTRNP46939 3433 aa34.01■■■■□ 3.04
FOXA1-204ENST00000554607 TFCP2L1Q9NZI6 479 aa34.01■■■■□ 3.03
FOXA1-204ENST00000554607 QSER1Q2KHR3 1735 aa33.99■■■■□ 3.03
FOXA1-204ENST00000554607 CHD4Q14839 1912 aa33.99■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms