RNA–Protein interactions for RNA: ENST00000554556.5

GABRB3-206, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-206ENST00000554556 CPSF1Q10570 1443 aaKnown RBP31.7■■■□□ 2.67
GABRB3-206ENST00000554556 CDCA7Q9BWT1 371 aaPredicted RBP31.7■■■□□ 2.67
GABRB3-206ENST00000554556 AXIN2Q9Y2T1 843 aa31.7■■■□□ 2.67
GABRB3-206ENST00000554556 KTN1Q86UP2 1357 aaKnown RBP31.69■■■□□ 2.66
GABRB3-206ENST00000554556 NUP188Q5SRE5 1749 aa31.67■■■□□ 2.66
GABRB3-206ENST00000554556 SOX12O15370 315 aa31.67■■■□□ 2.66
GABRB3-206ENST00000554556 CSB-PGBD3P0DP91 1061 aa31.66■■■□□ 2.66
GABRB3-206ENST00000554556 SBNO2Q9Y2G9 1366 aa31.66■■■□□ 2.66
GABRB3-206ENST00000554556 CARD11Q9BXL7 1154 aa31.65■■■□□ 2.66
GABRB3-206ENST00000554556 RGPD5Q99666 1765 aa31.65■■■□□ 2.66
GABRB3-206ENST00000554556 LRRC37A3O60309 1634 aa31.64■■■□□ 2.66
GABRB3-206ENST00000554556 CARD10Q9BWT7 1032 aa31.64■■■□□ 2.66
GABRB3-206ENST00000554556 PEAK1Q9H792 1746 aa31.63■■■□□ 2.65
GABRB3-206ENST00000554556 SBF2Q86WG5 1849 aa31.63■■■□□ 2.65
GABRB3-206ENST00000554556 PLSCR1O15162 318 aa31.62■■■□□ 2.65
GABRB3-206ENST00000554556 WNK3Q9BYP7 1800 aa31.61■■■□□ 2.65
GABRB3-206ENST00000554556 BCL11BQ9C0K0 894 aaPredicted RBP31.6■■■□□ 2.65
GABRB3-206ENST00000554556 MON2Q7Z3U7 1717 aa31.6■■■□□ 2.65
GABRB3-206ENST00000554556 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.58■■■□□ 2.65
GABRB3-206ENST00000554556 EXOC5O00471 708 aa31.57■■■□□ 2.64
GABRB3-206ENST00000554556 HDGFL2Q7Z4V5 671 aaPredicted RBP31.57■■■□□ 2.64
GABRB3-206ENST00000554556 MARCH10Q8NA82 808 aaPredicted RBP31.57■■■□□ 2.64
GABRB3-206ENST00000554556 TMC1Q8TDI8 760 aa31.57■■■□□ 2.64
GABRB3-206ENST00000554556 NFAT5O94916 1531 aa31.57■■■□□ 2.64
GABRB3-206ENST00000554556 RGPD3A6NKT7 1758 aaPredicted RBP31.57■■■□□ 2.64
GABRB3-206ENST00000554556 RGPD4Q7Z3J3 1758 aa31.57■■■□□ 2.64
GABRB3-206ENST00000554556 CCDC7Q96M83 1385 aa31.56■■■□□ 2.64
GABRB3-206ENST00000554556 ABCC6O95255 1503 aa31.56■■■□□ 2.64
GABRB3-206ENST00000554556 USP31Q70CQ4 1352 aa31.56■■■□□ 2.64
GABRB3-206ENST00000554556 BCL9O00512 1426 aa31.55■■■□□ 2.64
GABRB3-206ENST00000554556 TONSLQ96HA7 1378 aa31.55■■■□□ 2.64
GABRB3-206ENST00000554556 SPON1Q9HCB6 807 aa31.53■■■□□ 2.64
GABRB3-206ENST00000554556 NME9Q86XW9 330 aa31.5■■■□□ 2.63
GABRB3-206ENST00000554556 PUS7Q96PZ0 661 aaKnown RBP31.5■■■□□ 2.63
GABRB3-206ENST00000554556 SLC12A5Q9H2X9 1139 aa31.5■■■□□ 2.63
GABRB3-206ENST00000554556 TERF2IPQ9NYB0 399 aa31.5■■■□□ 2.63
GABRB3-206ENST00000554556 USP54Q70EL1 1684 aa31.49■■■□□ 2.63
GABRB3-206ENST00000554556 KCNQ2O43526 872 aa31.49■■■□□ 2.63
GABRB3-206ENST00000554556 CD163L1Q9NR16 1453 aa31.48■■■□□ 2.63
GABRB3-206ENST00000554556 PTF1AQ7RTS3 328 aa31.48■■■□□ 2.63
GABRB3-206ENST00000554556 PPP1R1BQ9UD71 204 aaPredicted RBP31.48■■■□□ 2.63
GABRB3-206ENST00000554556 EDC4Q6P2E9 1401 aaKnown RBP31.46■■■□□ 2.63
GABRB3-206ENST00000554556 NLRP2Q9NX02 1062 aa31.45■■■□□ 2.63
GABRB3-206ENST00000554556 ERBB3P21860 1342 aa31.45■■■□□ 2.62
GABRB3-206ENST00000554556 LTN1O94822 1766 aa31.44■■■□□ 2.62
GABRB3-206ENST00000554556 TNS2Q63HR2 1409 aa31.43■■■□□ 2.62
GABRB3-206ENST00000554556 SLC24A1O60721 1099 aa31.43■■■□□ 2.62
GABRB3-206ENST00000554556 PROM2Q8N271 834 aa31.42■■■□□ 2.62
GABRB3-206ENST00000554556 IL2RBP14784 551 aa31.4■■■□□ 2.62
GABRB3-206ENST00000554556 ANKRD24Q8TF21 1146 aa31.4■■■□□ 2.62
GABRB3-206ENST00000554556 ANO8Q9HCE9 1232 aaPredicted RBP31.4■■■□□ 2.62
GABRB3-206ENST00000554556 TXNRD1Q16881 649 aa31.39■■■□□ 2.62
GABRB3-206ENST00000554556 A0A1W2PP64 1363 aa31.39■■■□□ 2.62
GABRB3-206ENST00000554556 DCAF8L1A6NGE4 600 aa31.37■■■□□ 2.61
GABRB3-206ENST00000554556 STK32BQ9NY57 414 aa31.37■■■□□ 2.61
GABRB3-206ENST00000554556 NINLQ9Y2I6 1382 aa31.37■■■□□ 2.61
GABRB3-206ENST00000554556 KAT6BQ8WYB5 2073 aa31.34■■■□□ 2.61
GABRB3-206ENST00000554556 ST20-MTHFSA0A0A6YYL1 179 aa31.34■■■□□ 2.61
GABRB3-206ENST00000554556 IP6K1Q92551 441 aa31.33■■■□□ 2.61
GABRB3-206ENST00000554556 CASZ1Q86V15 1759 aa31.33■■■□□ 2.61
GABRB3-206ENST00000554556 ACSBG1Q96GR2 724 aa31.32■■■□□ 2.6
GABRB3-206ENST00000554556 TESK2Q96S53 571 aa31.32■■■□□ 2.6
GABRB3-206ENST00000554556 NHSQ6T4R5 1651 aa31.32■■■□□ 2.6
GABRB3-206ENST00000554556 SLC15A2Q16348 729 aa31.31■■■□□ 2.6
GABRB3-206ENST00000554556 COG3Q96JB2 828 aa31.3■■■□□ 2.6
GABRB3-206ENST00000554556 ZBTB7AO95365 584 aa31.27■■■□□ 2.6
GABRB3-206ENST00000554556 PDGFDQ9GZP0 370 aaPredicted RBP31.27■■■□□ 2.6
GABRB3-206ENST00000554556 LTV1Q96GA3 475 aaPredicted RBP31.26■■■□□ 2.59
GABRB3-206ENST00000554556 FAM208AQ9UK61 1670 aaKnown RBP31.25■■■□□ 2.59
GABRB3-206ENST00000554556 YY1P25490 414 aa31.24■■■□□ 2.59
GABRB3-206ENST00000554556 AMPHP49418 695 aa31.23■■■□□ 2.59
GABRB3-206ENST00000554556 ATF5Q9Y2D1 282 aaPredicted RBP31.23■■■□□ 2.59
GABRB3-206ENST00000554556 BTAF1O14981 1849 aa31.21■■■□□ 2.59
GABRB3-206ENST00000554556 DDX54Q8TDD1 881 aaKnown RBP31.21■■■□□ 2.59
GABRB3-206ENST00000554556 MAP3K19Q56UN5 1328 aa31.21■■■□□ 2.59
GABRB3-206ENST00000554556 ANKRD36BQ8N2N9 1353 aa31.2■■■□□ 2.59
GABRB3-206ENST00000554556 TMF1P82094 1093 aa31.2■■■□□ 2.59
GABRB3-206ENST00000554556 HOXC9P31274 260 aa31.19■■■□□ 2.58
GABRB3-206ENST00000554556 PTGER2P43116 358 aa31.19■■■□□ 2.58
GABRB3-206ENST00000554556 MTFR1LQ9H019 292 aa31.19■■■□□ 2.58
GABRB3-206ENST00000554556 TRIM26Q12899 539 aaPredicted RBP31.17■■■□□ 2.58
GABRB3-206ENST00000554556 MYOM1P52179 1685 aa31.13■■■□□ 2.57
GABRB3-206ENST00000554556 FBLN1P23142 703 aa31.13■■■□□ 2.57
GABRB3-206ENST00000554556 CDCA8Q53HL2 280 aa31.13■■■□□ 2.57
GABRB3-206ENST00000554556 SLC27A3Q5K4L6 730 aa31.12■■■□□ 2.57
GABRB3-206ENST00000554556 USP47Q96K76 1375 aa31.12■■■□□ 2.57
GABRB3-206ENST00000554556 RTL1A6NKG5 1358 aa31.11■■■□□ 2.57
GABRB3-206ENST00000554556 FYB1O15117 783 aa31.11■■■□□ 2.57
GABRB3-206ENST00000554556 PAPPAQ13219 1627 aa31.11■■■□□ 2.57
GABRB3-206ENST00000554556 ZCRB1Q8TBF4 217 aaKnown RBP31.1■■■□□ 2.57
GABRB3-206ENST00000554556 LRRC4BQ9NT99 713 aa31.1■■■□□ 2.57
GABRB3-206ENST00000554556 RGPD2P0DJD1 1756 aa31.1■■■□□ 2.57
GABRB3-206ENST00000554556 SYTL4Q96C24 671 aaPredicted RBP31.09■■■□□ 2.57
GABRB3-206ENST00000554556 GGNBP2Q9H3C7 697 aa31.09■■■□□ 2.57
GABRB3-206ENST00000554556 FHDC1Q9C0D6 1143 aaPredicted RBP31.08■■■□□ 2.57
GABRB3-206ENST00000554556 PRIM1P49642 420 aaKnown RBP31.07■■■□□ 2.56
GABRB3-206ENST00000554556 RRS1Q15050 365 aaKnown RBP31.07■■■□□ 2.56
GABRB3-206ENST00000554556 SGIP1Q9BQI5 828 aa31.07■■■□□ 2.56
GABRB3-206ENST00000554556 SYT17Q9BSW7 474 aa31.07■■■□□ 2.56
GABRB3-206ENST00000554556 ZNF827Q17R98 1081 aa31.06■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms