RNA–Protein interactions for RNA: ENST00000554541.5

PSMA6-206, Transcript of proteasome subunit alpha 6, humanhuman

TSL 2

Gene PSMA6, Length 925 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-206ENST00000554541 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.35■□□□□ 0.21
PSMA6-206ENST00000554541 PCGF6Q9BYE7 350 aa16.35■□□□□ 0.21
PSMA6-206ENST00000554541 AXIN2Q9Y2T1 843 aa16.35■□□□□ 0.21
PSMA6-206ENST00000554541 PARP4Q9UKK3 1724 aaKnown RBP16.35■□□□□ 0.21
PSMA6-206ENST00000554541 RGPD5Q99666 1765 aa16.34■□□□□ 0.21
PSMA6-206ENST00000554541 NME9Q86XW9 330 aa16.33■□□□□ 0.2
PSMA6-206ENST00000554541 ZRANB1Q9UGI0 708 aa16.33■□□□□ 0.2
PSMA6-206ENST00000554541 WDR17Q8IZU2 1322 aa16.33■□□□□ 0.2
PSMA6-206ENST00000554541 TNS1Q9HBL0 1735 aaKnown RBP16.33■□□□□ 0.2
PSMA6-206ENST00000554541 SOX12O15370 315 aa16.32■□□□□ 0.2
PSMA6-206ENST00000554541 FAM196AQ6ZSG2 479 aa16.32■□□□□ 0.2
PSMA6-206ENST00000554541 DISP2A7MBM2 1401 aa16.31■□□□□ 0.2
PSMA6-206ENST00000554541 PDE3BQ13370 1112 aa16.31■□□□□ 0.2
PSMA6-206ENST00000554541 WNK3Q9BYP7 1800 aa16.31■□□□□ 0.2
PSMA6-206ENST00000554541 OVOS2A0A0J9YW53 1432 aa16.3■□□□□ 0.2
PSMA6-206ENST00000554541 OVOS2Q6IE36 1432 aa16.3■□□□□ 0.2
PSMA6-206ENST00000554541 BAG6P46379 1132 aa16.3■□□□□ 0.2
PSMA6-206ENST00000554541 TMF1P82094 1093 aa16.3■□□□□ 0.2
PSMA6-206ENST00000554541 TOM1L2Q6ZVM7 507 aa16.3■□□□□ 0.2
PSMA6-206ENST00000554541 LTN1O94822 1766 aa16.3■□□□□ 0.2
PSMA6-206ENST00000554541 LRRC37A3O60309 1634 aa16.3■□□□□ 0.2
PSMA6-206ENST00000554541 ANKRD36BQ8N2N9 1353 aa16.29■□□□□ 0.2
PSMA6-206ENST00000554541 CARD10Q9BWT7 1032 aa16.27■□□□□ 0.2
PSMA6-206ENST00000554541 PEAK1Q9H792 1746 aa16.26■□□□□ 0.19
PSMA6-206ENST00000554541 TRIM37O94972 964 aa16.26■□□□□ 0.19
PSMA6-206ENST00000554541 CDCA8Q53HL2 280 aa16.26■□□□□ 0.19
PSMA6-206ENST00000554541 CDCA7Q9BWT1 371 aaPredicted RBP16.26■□□□□ 0.19
PSMA6-206ENST00000554541 C11orf95C9JLR9 678 aaPredicted RBP16.25■□□□□ 0.19
PSMA6-206ENST00000554541 CSB-PGBD3P0DP91 1061 aa16.25■□□□□ 0.19
PSMA6-206ENST00000554541 EN1Q05925 392 aaPredicted RBP16.25■□□□□ 0.19
PSMA6-206ENST00000554541 CCDC7Q96M83 1385 aa16.25■□□□□ 0.19
PSMA6-206ENST00000554541 ERBB3P21860 1342 aa16.24■□□□□ 0.19
PSMA6-206ENST00000554541 DDB1Q16531 1140 aa16.24■□□□□ 0.19
PSMA6-206ENST00000554541 OVOS2A0A0G2JMS6 1433 aa16.24■□□□□ 0.19
PSMA6-206ENST00000554541 CCER1Q8TC90 406 aaPredicted RBP16.23■□□□□ 0.19
PSMA6-206ENST00000554541 MYOM1P52179 1685 aa16.23■□□□□ 0.19
PSMA6-206ENST00000554541 PARD3Q8TEW0 1356 aa16.23■□□□□ 0.19
PSMA6-206ENST00000554541 COG3Q96JB2 828 aa16.22■□□□□ 0.19
PSMA6-206ENST00000554541 CAMKK2Q96RR4 588 aa16.22■□□□□ 0.19
PSMA6-206ENST00000554541 SBF2Q86WG5 1849 aa16.22■□□□□ 0.19
PSMA6-206ENST00000554541 BCL9O00512 1426 aa16.21■□□□□ 0.19
PSMA6-206ENST00000554541 APBA3O96018 575 aa16.21■□□□□ 0.19
PSMA6-206ENST00000554541 EZH2Q15910 746 aaKnown RBP16.2■□□□□ 0.18
PSMA6-206ENST00000554541 ANKRD24Q8TF21 1146 aa16.2■□□□□ 0.18
PSMA6-206ENST00000554541 IP6K1Q92551 441 aa16.2■□□□□ 0.18
PSMA6-206ENST00000554541 RREB1Q92766 1687 aa16.2■□□□□ 0.18
PSMA6-206ENST00000554541 FAM208AQ9UK61 1670 aaKnown RBP16.19■□□□□ 0.18
PSMA6-206ENST00000554541 FYB1O15117 783 aa16.19■□□□□ 0.18
PSMA6-206ENST00000554541 MARCH10Q8NA82 808 aaPredicted RBP16.19■□□□□ 0.18
PSMA6-206ENST00000554541 KIF20BQ96Q89 1820 aa16.19■□□□□ 0.18
PSMA6-206ENST00000554541 MAP3K19Q56UN5 1328 aa16.19■□□□□ 0.18
PSMA6-206ENST00000554541 NLRP2Q9NX02 1062 aa16.18■□□□□ 0.18
PSMA6-206ENST00000554541 TNS2Q63HR2 1409 aa16.18■□□□□ 0.18
PSMA6-206ENST00000554541 EXOC5O00471 708 aa16.17■□□□□ 0.18
PSMA6-206ENST00000554541 RGPD3A6NKT7 1758 aaPredicted RBP16.17■□□□□ 0.18
PSMA6-206ENST00000554541 RGPD4Q7Z3J3 1758 aa16.17■□□□□ 0.18
PSMA6-206ENST00000554541 NUP188Q5SRE5 1749 aa16.16■□□□□ 0.18
PSMA6-206ENST00000554541 CARD14Q9BXL6 1004 aa16.16■□□□□ 0.18
PSMA6-206ENST00000554541 GGNBP2Q9H3C7 697 aa16.16■□□□□ 0.18
PSMA6-206ENST00000554541 RTL1A6NKG5 1358 aa16.15■□□□□ 0.18
PSMA6-206ENST00000554541 PSDA5PKW4 1024 aaPredicted RBP16.15■□□□□ 0.18
PSMA6-206ENST00000554541 IL2RBP14784 551 aa16.15■□□□□ 0.18
PSMA6-206ENST00000554541 FBLN1P23142 703 aa16.15■□□□□ 0.18
PSMA6-206ENST00000554541 HOXC9P31274 260 aa16.15■□□□□ 0.18
PSMA6-206ENST00000554541 LRP5O75197 1615 aa16.15■□□□□ 0.18
PSMA6-206ENST00000554541 AMPHP49418 695 aa16.14■□□□□ 0.17
PSMA6-206ENST00000554541 EIF4G2P78344 907 aaKnown RBP eCLIP16.14■□□□□ 0.17
PSMA6-206ENST00000554541 BCL11BQ9C0K0 894 aaPredicted RBP16.14■□□□□ 0.17
PSMA6-206ENST00000554541 NSD3Q9BZ95 1437 aa16.13■□□□□ 0.17
PSMA6-206ENST00000554541 PLSCR1O15162 318 aa16.13■□□□□ 0.17
PSMA6-206ENST00000554541 R3HDM1Q15032 1099 aaKnown RBP16.12■□□□□ 0.17
PSMA6-206ENST00000554541 PTF1AQ7RTS3 328 aa16.12■□□□□ 0.17
PSMA6-206ENST00000554541 SRCAPQ6ZRS2 3230 aa16.11■□□□□ 0.17
PSMA6-206ENST00000554541 HSPA5P11021 654 aaKnown RBP16.11■□□□□ 0.17
PSMA6-206ENST00000554541 RRS1Q15050 365 aaKnown RBP16.11■□□□□ 0.17
PSMA6-206ENST00000554541 LTV1Q96GA3 475 aaPredicted RBP16.11■□□□□ 0.17
PSMA6-206ENST00000554541 KIF24Q5T7B8 1368 aa16.11■□□□□ 0.17
PSMA6-206ENST00000554541 RGPD2P0DJD1 1756 aa16.1■□□□□ 0.17
PSMA6-206ENST00000554541 NHSQ6T4R5 1651 aa16.1■□□□□ 0.17
PSMA6-206ENST00000554541 NBPF14Q5TI25 921 aa16.08■□□□□ 0.16
PSMA6-206ENST00000554541 INSRP06213 1382 aa16.08■□□□□ 0.16
PSMA6-206ENST00000554541 FLT4P35916 1363 aa16.08■□□□□ 0.16
PSMA6-206ENST00000554541 CGNL1Q0VF96 1302 aa16.07■□□□□ 0.16
PSMA6-206ENST00000554541 ANKRD26Q9UPS8 1709 aa16.07■□□□□ 0.16
PSMA6-206ENST00000554541 SMG6Q86US8 1419 aaKnown RBP16.06■□□□□ 0.16
PSMA6-206ENST00000554541 KCNQ2O43526 872 aa16.06■□□□□ 0.16
PSMA6-206ENST00000554541 HSP90AB2PQ58FF8 381 aa16.06■□□□□ 0.16
PSMA6-206ENST00000554541 PROM2Q8N271 834 aa16.06■□□□□ 0.16
PSMA6-206ENST00000554541 SHANK3Q9BYB0 1731 aa16.05■□□□□ 0.16
PSMA6-206ENST00000554541 MEGF6O75095 1541 aa16.05■□□□□ 0.16
PSMA6-206ENST00000554541 NBPF6Q5VWK0 638 aa16.05■□□□□ 0.16
PSMA6-206ENST00000554541 NBPF4Q96M43 638 aa16.05■□□□□ 0.16
PSMA6-206ENST00000554541 POLR3GLQ9BT43 218 aa16.05■□□□□ 0.16
PSMA6-206ENST00000554541 BTAF1O14981 1849 aa16.04■□□□□ 0.16
PSMA6-206ENST00000554541 ACSBG1Q96GR2 724 aa16.04■□□□□ 0.16
PSMA6-206ENST00000554541 MAP2P11137 1827 aaKnown RBP16.03■□□□□ 0.16
PSMA6-206ENST00000554541 KAT6BQ8WYB5 2073 aa16.03■□□□□ 0.16
PSMA6-206ENST00000554541 EMILIN1Q9Y6C2 1016 aa16.03■□□□□ 0.16
PSMA6-206ENST00000554541 TXNRD1Q16881 649 aa16.02■□□□□ 0.16
PSMA6-206ENST00000554541 DDX54Q8TDD1 881 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms