RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 CCER1Q8TC90 406 aaPredicted RBP12.22□□□□□ -0.45
ACTN1-213ENST00000554508 RGPD1P0DJD0 1748 aa12.22□□□□□ -0.45
ACTN1-213ENST00000554508 PDE3BQ13370 1112 aa12.21□□□□□ -0.45
ACTN1-213ENST00000554508 FAM196AQ6ZSG2 479 aa12.21□□□□□ -0.45
ACTN1-213ENST00000554508 NME9Q86XW9 330 aa12.21□□□□□ -0.45
ACTN1-213ENST00000554508 AXIN2Q9Y2T1 843 aa12.21□□□□□ -0.45
ACTN1-213ENST00000554508 NFAT5O94916 1531 aa12.21□□□□□ -0.46
ACTN1-213ENST00000554508 ABCC6O95255 1503 aa12.21□□□□□ -0.46
ACTN1-213ENST00000554508 LTN1O94822 1766 aa12.2□□□□□ -0.46
ACTN1-213ENST00000554508 PARP4Q9UKK3 1724 aaKnown RBP12.2□□□□□ -0.46
ACTN1-213ENST00000554508 WDR17Q8IZU2 1322 aa12.2□□□□□ -0.46
ACTN1-213ENST00000554508 SOX12O15370 315 aa12.2□□□□□ -0.46
ACTN1-213ENST00000554508 TOM1L2Q6ZVM7 507 aa12.2□□□□□ -0.46
ACTN1-213ENST00000554508 ZRANB1Q9UGI0 708 aa12.2□□□□□ -0.46
ACTN1-213ENST00000554508 BAG6P46379 1132 aa12.19□□□□□ -0.46
ACTN1-213ENST00000554508 FAM182BQ5T319 152 aa12.19□□□□□ -0.46
ACTN1-213ENST00000554508 ANKRD36BQ8N2N9 1353 aa12.18□□□□□ -0.46
ACTN1-213ENST00000554508 C11orf95C9JLR9 678 aaPredicted RBP12.18□□□□□ -0.46
ACTN1-213ENST00000554508 DEFB132Q7Z7B7 95 aa12.18□□□□□ -0.46
ACTN1-213ENST00000554508 CDCA7Q9BWT1 371 aaPredicted RBP12.18□□□□□ -0.46
ACTN1-213ENST00000554508 CARD10Q9BWT7 1032 aa12.18□□□□□ -0.46
ACTN1-213ENST00000554508 WNK3Q9BYP7 1800 aa12.17□□□□□ -0.46
ACTN1-213ENST00000554508 CSB-PGBD3P0DP91 1061 aa12.17□□□□□ -0.46
ACTN1-213ENST00000554508 COG3Q96JB2 828 aa12.17□□□□□ -0.46
ACTN1-213ENST00000554508 OVOS2A0A0J9YW53 1432 aa12.17□□□□□ -0.46
ACTN1-213ENST00000554508 OVOS2Q6IE36 1432 aa12.17□□□□□ -0.46
ACTN1-213ENST00000554508 TNS1Q9HBL0 1735 aaKnown RBP12.16□□□□□ -0.46
ACTN1-213ENST00000554508 CCDC7Q96M83 1385 aa12.16□□□□□ -0.46
ACTN1-213ENST00000554508 DDB1Q16531 1140 aa12.15□□□□□ -0.46
ACTN1-213ENST00000554508 SBF2Q86WG5 1849 aa12.14□□□□□ -0.47
ACTN1-213ENST00000554508 DISP2A7MBM2 1401 aa12.14□□□□□ -0.47
ACTN1-213ENST00000554508 EN1Q05925 392 aaPredicted RBP12.14□□□□□ -0.47
ACTN1-213ENST00000554508 LRRC37A3O60309 1634 aa12.13□□□□□ -0.47
ACTN1-213ENST00000554508 FYB1O15117 783 aa12.13□□□□□ -0.47
ACTN1-213ENST00000554508 TRIM37O94972 964 aa12.13□□□□□ -0.47
ACTN1-213ENST00000554508 EIF4G2P78344 907 aaKnown RBP eCLIP12.13□□□□□ -0.476e-7■■■■■ 48.9
ACTN1-213ENST00000554508 IP6K1Q92551 441 aa12.13□□□□□ -0.47
ACTN1-213ENST00000554508 KIF20BQ96Q89 1820 aa12.13□□□□□ -0.47
ACTN1-213ENST00000554508 MYOM1P52179 1685 aa12.13□□□□□ -0.47
ACTN1-213ENST00000554508 ERBB3P21860 1342 aa12.12□□□□□ -0.47
ACTN1-213ENST00000554508 PEAK1Q9H792 1746 aa12.12□□□□□ -0.47
ACTN1-213ENST00000554508 EXOC5O00471 708 aa12.12□□□□□ -0.47
ACTN1-213ENST00000554508 APBA3O96018 575 aa12.12□□□□□ -0.47
ACTN1-213ENST00000554508 ANKRD24Q8TF21 1146 aa12.12□□□□□ -0.47
ACTN1-213ENST00000554508 FAM208AQ9UK61 1670 aaKnown RBP12.12□□□□□ -0.47
ACTN1-213ENST00000554508 KAT6BQ8WYB5 2073 aa12.12□□□□□ -0.47
ACTN1-213ENST00000554508 OVOS2A0A0G2JMS6 1433 aa12.11□□□□□ -0.47
ACTN1-213ENST00000554508 NLRP2Q9NX02 1062 aa12.11□□□□□ -0.47
ACTN1-213ENST00000554508 PARD3Q8TEW0 1356 aa12.1□□□□□ -0.47
ACTN1-213ENST00000554508 AMPHP49418 695 aa12.1□□□□□ -0.47
ACTN1-213ENST00000554508 CAMKK2Q96RR4 588 aa12.1□□□□□ -0.47
ACTN1-213ENST00000554508 GGNBP2Q9H3C7 697 aa12.1□□□□□ -0.47
ACTN1-213ENST00000554508 BCL9O00512 1426 aa12.1□□□□□ -0.47
ACTN1-213ENST00000554508 MAP3K19Q56UN5 1328 aa12.1□□□□□ -0.47
ACTN1-213ENST00000554508 HSPA5P11021 654 aaKnown RBP12.09□□□□□ -0.47
ACTN1-213ENST00000554508 EZH2Q15910 746 aaKnown RBP12.09□□□□□ -0.47
ACTN1-213ENST00000554508 MARCH10Q8NA82 808 aaPredicted RBP12.09□□□□□ -0.47
ACTN1-213ENST00000554508 CARD14Q9BXL6 1004 aa12.09□□□□□ -0.47
ACTN1-213ENST00000554508 IL2RBP14784 551 aa12.08□□□□□ -0.48
ACTN1-213ENST00000554508 HOXC9P31274 260 aa12.08□□□□□ -0.48
ACTN1-213ENST00000554508 BCL11BQ9C0K0 894 aaPredicted RBP12.08□□□□□ -0.48
ACTN1-213ENST00000554508 RTL1A6NKG5 1358 aa12.07□□□□□ -0.48
ACTN1-213ENST00000554508 FBLN1P23142 703 aa12.07□□□□□ -0.48
ACTN1-213ENST00000554508 TNS2Q63HR2 1409 aa12.07□□□□□ -0.48
ACTN1-213ENST00000554508 NSD3Q9BZ95 1437 aa12.07□□□□□ -0.48
ACTN1-213ENST00000554508 RGPD2P0DJD1 1756 aa12.07□□□□□ -0.48
ACTN1-213ENST00000554508 MAP2P11137 1827 aaKnown RBP12.07□□□□□ -0.48
ACTN1-213ENST00000554508 RREB1Q92766 1687 aa12.06□□□□□ -0.48
ACTN1-213ENST00000554508 KIF24Q5T7B8 1368 aa12.06□□□□□ -0.48
ACTN1-213ENST00000554508 RGPD3A6NKT7 1758 aaPredicted RBP12.06□□□□□ -0.48
ACTN1-213ENST00000554508 RGPD4Q7Z3J3 1758 aa12.06□□□□□ -0.48
ACTN1-213ENST00000554508 PLSCR1O15162 318 aa12.06□□□□□ -0.48
ACTN1-213ENST00000554508 LTV1Q96GA3 475 aaPredicted RBP12.06□□□□□ -0.48
ACTN1-213ENST00000554508 POLR3GLQ9BT43 218 aa12.06□□□□□ -0.48
ACTN1-213ENST00000554508 RRS1Q15050 365 aaKnown RBP12.05□□□□□ -0.48
ACTN1-213ENST00000554508 CGNL1Q0VF96 1302 aa12.05□□□□□ -0.48
ACTN1-213ENST00000554508 NUP188Q5SRE5 1749 aa12.04□□□□□ -0.48
ACTN1-213ENST00000554508 NBPF14Q5TI25 921 aa12.04□□□□□ -0.48
ACTN1-213ENST00000554508 INSRP06213 1382 aa12.04□□□□□ -0.48
ACTN1-213ENST00000554508 SMG6Q86US8 1419 aaKnown RBP12.03□□□□□ -0.48
ACTN1-213ENST00000554508 ANKRD26Q9UPS8 1709 aa12.03□□□□□ -0.48
ACTN1-213ENST00000554508 PSDA5PKW4 1024 aaPredicted RBP12.03□□□□□ -0.48
ACTN1-213ENST00000554508 FLT4P35916 1363 aa12.03□□□□□ -0.48
ACTN1-213ENST00000554508 R3HDM1Q15032 1099 aaKnown RBP12.02□□□□□ -0.49
ACTN1-213ENST00000554508 NHSQ6T4R5 1651 aa12.01□□□□□ -0.49
ACTN1-213ENST00000554508 HSP90AB2PQ58FF8 381 aa12.01□□□□□ -0.49
ACTN1-213ENST00000554508 PANK3Q9H999 370 aa12.01□□□□□ -0.49
ACTN1-213ENST00000554508 LRP5O75197 1615 aa12□□□□□ -0.49
ACTN1-213ENST00000554508 NBPF6Q5VWK0 638 aa12□□□□□ -0.49
ACTN1-213ENST00000554508 PTF1AQ7RTS3 328 aa12□□□□□ -0.49
ACTN1-213ENST00000554508 ZCRB1Q8TBF4 217 aaKnown RBP12□□□□□ -0.49
ACTN1-213ENST00000554508 NBPF4Q96M43 638 aa12□□□□□ -0.49
ACTN1-213ENST00000554508 KCNQ2O43526 872 aa11.99□□□□□ -0.49
ACTN1-213ENST00000554508 DDX54Q8TDD1 881 aaKnown RBP11.99□□□□□ -0.49
ACTN1-213ENST00000554508 RAPGEF4Q8WZA2 1011 aa11.99□□□□□ -0.49
ACTN1-213ENST00000554508 ACSBG1Q96GR2 724 aa11.99□□□□□ -0.49
ACTN1-213ENST00000554508 EMILIN1Q9Y6C2 1016 aa11.99□□□□□ -0.49
ACTN1-213ENST00000554508 WASHC2AQ641Q2 1341 aa11.99□□□□□ -0.49
ACTN1-213ENST00000554508 BTAF1O14981 1849 aa11.99□□□□□ -0.49
ACTN1-213ENST00000554508 SHANK3Q9BYB0 1731 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms