RNA–Protein interactions for RNA: ENST00000554340.1

NEMP1-204, Transcript of nuclear envelope integral membrane protein 1, humanhuman

TSL 1 (best)

Gene NEMP1, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMP1-204ENST00000554340 SBF2Q86WG5 1849 aa29.15■■■□□ 2.26
NEMP1-204ENST00000554340 NFAT5O94916 1531 aa29.15■■■□□ 2.26
NEMP1-204ENST00000554340 C11orf95C9JLR9 678 aaPredicted RBP29.14■■■□□ 2.26
NEMP1-204ENST00000554340 TOM1L2Q6ZVM7 507 aa29.14■■■□□ 2.26
NEMP1-204ENST00000554340 ARHGEF25Q86VW2 580 aa29.14■■■□□ 2.26
NEMP1-204ENST00000554340 USP54Q70EL1 1684 aa29.14■■■□□ 2.26
NEMP1-204ENST00000554340 WDR17Q8IZU2 1322 aa29.14■■■□□ 2.26
NEMP1-204ENST00000554340 OVOS2A0A0G2JMS6 1433 aa29.14■■■□□ 2.26
NEMP1-204ENST00000554340 OVOS2A0A0J9YW53 1432 aa29.14■■■□□ 2.26
NEMP1-204ENST00000554340 OVOS2Q6IE36 1432 aa29.14■■■□□ 2.26
NEMP1-204ENST00000554340 TRIM26Q12899 539 aaPredicted RBP29.13■■■□□ 2.25
NEMP1-204ENST00000554340 CARD11Q9BXL7 1154 aa29.13■■■□□ 2.25
NEMP1-204ENST00000554340 AXIN2Q9Y2T1 843 aa29.13■■■□□ 2.25
NEMP1-204ENST00000554340 ABCC6O95255 1503 aa29.12■■■□□ 2.25
NEMP1-204ENST00000554340 RGPD3A6NKT7 1758 aaPredicted RBP29.11■■■□□ 2.25
NEMP1-204ENST00000554340 RGPD4Q7Z3J3 1758 aa29.11■■■□□ 2.25
NEMP1-204ENST00000554340 TONSLQ96HA7 1378 aa29.1■■■□□ 2.25
NEMP1-204ENST00000554340 SOX12O15370 315 aa29.09■■■□□ 2.25
NEMP1-204ENST00000554340 DDB1Q16531 1140 aa29.09■■■□□ 2.25
NEMP1-204ENST00000554340 CD163L1Q9NR16 1453 aa29.09■■■□□ 2.25
NEMP1-204ENST00000554340 CDCA7Q9BWT1 371 aaPredicted RBP29.06■■■□□ 2.24
NEMP1-204ENST00000554340 USP31Q70CQ4 1352 aa29.05■■■□□ 2.24
NEMP1-204ENST00000554340 LTN1O94822 1766 aa29.05■■■□□ 2.24
NEMP1-204ENST00000554340 CARD10Q9BWT7 1032 aa29.04■■■□□ 2.24
NEMP1-204ENST00000554340 CSB-PGBD3P0DP91 1061 aa29.03■■■□□ 2.24
NEMP1-204ENST00000554340 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.03■■■□□ 2.24
NEMP1-204ENST00000554340 NBPF14Q5TI25 921 aa29.02■■■□□ 2.24
NEMP1-204ENST00000554340 BCL9O00512 1426 aa29.01■■■□□ 2.23
NEMP1-204ENST00000554340 TMC1Q8TDI8 760 aa29.01■■■□□ 2.23
NEMP1-204ENST00000554340 EDC4Q6P2E9 1401 aaKnown RBP29■■■□□ 2.23
NEMP1-204ENST00000554340 HDGFL2Q7Z4V5 671 aaPredicted RBP29■■■□□ 2.23
NEMP1-204ENST00000554340 CCDC7Q96M83 1385 aa28.99■■■□□ 2.23
NEMP1-204ENST00000554340 NME9Q86XW9 330 aa28.99■■■□□ 2.23
NEMP1-204ENST00000554340 MARCH10Q8NA82 808 aaPredicted RBP28.99■■■□□ 2.23
NEMP1-204ENST00000554340 PUS7Q96PZ0 661 aaKnown RBP28.98■■■□□ 2.23
NEMP1-204ENST00000554340 BCL11BQ9C0K0 894 aaPredicted RBP28.97■■■□□ 2.23
NEMP1-204ENST00000554340 SLC12A5Q9H2X9 1139 aa28.97■■■□□ 2.23
NEMP1-204ENST00000554340 PLSCR1O15162 318 aa28.96■■■□□ 2.23
NEMP1-204ENST00000554340 A0A1W2PP64 1363 aa28.95■■■□□ 2.23
NEMP1-204ENST00000554340 TERF2IPQ9NYB0 399 aa28.95■■■□□ 2.22
NEMP1-204ENST00000554340 TNS2Q63HR2 1409 aa28.94■■■□□ 2.22
NEMP1-204ENST00000554340 ERBB3P21860 1342 aa28.93■■■□□ 2.22
NEMP1-204ENST00000554340 EXOC5O00471 708 aa28.92■■■□□ 2.22
NEMP1-204ENST00000554340 PTF1AQ7RTS3 328 aa28.92■■■□□ 2.22
NEMP1-204ENST00000554340 NINLQ9Y2I6 1382 aa28.91■■■□□ 2.22
NEMP1-204ENST00000554340 TESK2Q96S53 571 aa28.89■■■□□ 2.22
NEMP1-204ENST00000554340 NHSQ6T4R5 1651 aa28.88■■■□□ 2.21
NEMP1-204ENST00000554340 ST20-MTHFSA0A0A6YYL1 179 aa28.87■■■□□ 2.21
NEMP1-204ENST00000554340 NLRP2Q9NX02 1062 aa28.87■■■□□ 2.21
NEMP1-204ENST00000554340 FAM208AQ9UK61 1670 aaKnown RBP28.86■■■□□ 2.21
NEMP1-204ENST00000554340 CASZ1Q86V15 1759 aa28.86■■■□□ 2.21
NEMP1-204ENST00000554340 SLC24A1O60721 1099 aa28.85■■■□□ 2.21
NEMP1-204ENST00000554340 ANKRD24Q8TF21 1146 aa28.84■■■□□ 2.21
NEMP1-204ENST00000554340 ANO8Q9HCE9 1232 aaPredicted RBP28.84■■■□□ 2.21
NEMP1-204ENST00000554340 PROM2Q8N271 834 aa28.83■■■□□ 2.21
NEMP1-204ENST00000554340 SPON1Q9HCB6 807 aa28.83■■■□□ 2.21
NEMP1-204ENST00000554340 IL2RBP14784 551 aa28.82■■■□□ 2.2
NEMP1-204ENST00000554340 KCNQ2O43526 872 aa28.81■■■□□ 2.2
NEMP1-204ENST00000554340 KAT6BQ8WYB5 2073 aa28.79■■■□□ 2.2
NEMP1-204ENST00000554340 IP6K1Q92551 441 aa28.78■■■□□ 2.2
NEMP1-204ENST00000554340 BTAF1O14981 1849 aa28.78■■■□□ 2.2
NEMP1-204ENST00000554340 TXNRD1Q16881 649 aa28.77■■■□□ 2.2
NEMP1-204ENST00000554340 ANKRD36BQ8N2N9 1353 aa28.76■■■□□ 2.19
NEMP1-204ENST00000554340 COG3Q96JB2 828 aa28.75■■■□□ 2.19
NEMP1-204ENST00000554340 PPP1R1BQ9UD71 204 aaPredicted RBP28.75■■■□□ 2.19
NEMP1-204ENST00000554340 USP47Q96K76 1375 aa28.74■■■□□ 2.19
NEMP1-204ENST00000554340 ACSBG1Q96GR2 724 aa28.73■■■□□ 2.19
NEMP1-204ENST00000554340 RGPD2P0DJD1 1756 aa28.72■■■□□ 2.19
NEMP1-204ENST00000554340 STK32BQ9NY57 414 aa28.72■■■□□ 2.19
NEMP1-204ENST00000554340 MAP3K19Q56UN5 1328 aa28.71■■■□□ 2.19
NEMP1-204ENST00000554340 PAPPAQ13219 1627 aa28.7■■■□□ 2.19
NEMP1-204ENST00000554340 TMF1P82094 1093 aa28.7■■■□□ 2.18
NEMP1-204ENST00000554340 LTV1Q96GA3 475 aaPredicted RBP28.7■■■□□ 2.18
NEMP1-204ENST00000554340 PDGFDQ9GZP0 370 aaPredicted RBP28.7■■■□□ 2.18
NEMP1-204ENST00000554340 SLC15A2Q16348 729 aa28.69■■■□□ 2.18
NEMP1-204ENST00000554340 KIF20BQ96Q89 1820 aa28.69■■■□□ 2.18
NEMP1-204ENST00000554340 HOXC9P31274 260 aa28.68■■■□□ 2.18
NEMP1-204ENST00000554340 TIMELESSQ9UNS1 1208 aa28.67■■■□□ 2.18
NEMP1-204ENST00000554340 RTL1A6NKG5 1358 aa28.67■■■□□ 2.18
NEMP1-204ENST00000554340 MYOM1P52179 1685 aa28.66■■■□□ 2.18
NEMP1-204ENST00000554340 SHANK3Q9BYB0 1731 aa28.66■■■□□ 2.18
NEMP1-204ENST00000554340 AMPHP49418 695 aa28.66■■■□□ 2.18
NEMP1-204ENST00000554340 FBLN1P23142 703 aa28.65■■■□□ 2.18
NEMP1-204ENST00000554340 ZBTB7AO95365 584 aa28.64■■■□□ 2.18
NEMP1-204ENST00000554340 CLSPNQ9HAW4 1339 aa28.64■■■□□ 2.18
NEMP1-204ENST00000554340 DOT1LQ8TEK3 1739 aa28.63■■■□□ 2.17
NEMP1-204ENST00000554340 FYB1O15117 783 aa28.62■■■□□ 2.17
NEMP1-204ENST00000554340 DDX54Q8TDD1 881 aaKnown RBP28.62■■■□□ 2.17
NEMP1-204ENST00000554340 PCGF6Q9BYE7 350 aa28.62■■■□□ 2.17
NEMP1-204ENST00000554340 PTGER2P43116 358 aa28.61■■■□□ 2.17
NEMP1-204ENST00000554340 CDCA8Q53HL2 280 aa28.61■■■□□ 2.17
NEMP1-204ENST00000554340 GGNBP2Q9H3C7 697 aa28.6■■■□□ 2.17
NEMP1-204ENST00000554340 MEGF6O75095 1541 aa28.59■■■□□ 2.17
NEMP1-204ENST00000554340 RRS1Q15050 365 aaKnown RBP28.58■■■□□ 2.17
NEMP1-204ENST00000554340 ATF5Q9Y2D1 282 aaPredicted RBP28.58■■■□□ 2.17
NEMP1-204ENST00000554340 QSER1Q2KHR3 1735 aa28.57■■■□□ 2.16
NEMP1-204ENST00000554340 MTFR1LQ9H019 292 aa28.57■■■□□ 2.16
NEMP1-204ENST00000554340 DCAF8L1A6NGE4 600 aa28.56■■■□□ 2.16
NEMP1-204ENST00000554340 SMG6Q86US8 1419 aaKnown RBP28.56■■■□□ 2.16
NEMP1-204ENST00000554340 LY75O60449 1722 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms