RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 RAPGEF3O95398 923 aa9.01□□□□□ -0.97
VPS33B-203ENST00000554264 GGCXP38435 758 aa9.01□□□□□ -0.97
VPS33B-203ENST00000554264 RFC5P40937 340 aa9.01□□□□□ -0.97
VPS33B-203ENST00000554264 DESI1Q6ICB0 168 aa9.01□□□□□ -0.97
VPS33B-203ENST00000554264 ANKLE1Q8NAG6 615 aa9.01□□□□□ -0.97
VPS33B-203ENST00000554264 ATP10BO94823 1461 aa9.01□□□□□ -0.97
VPS33B-203ENST00000554264 ARID4BQ4LE39 1312 aaPredicted RBP9.01□□□□□ -0.97
VPS33B-203ENST00000554264 LYPD8Q6UX82 237 aa9□□□□□ -0.97
VPS33B-203ENST00000554264 LIAT1Q6ZQX7 453 aa9□□□□□ -0.97
VPS33B-203ENST00000554264 LMTK3Q96Q04 1460 aa9□□□□□ -0.97
VPS33B-203ENST00000554264 BCORL1Q5H9F3 1711 aa9□□□□□ -0.97
VPS33B-203ENST00000554264 ARID3CA6NKF2 412 aa8.99□□□□□ -0.97
VPS33B-203ENST00000554264 PTCRAQ6ISU1 281 aaPredicted RBP8.99□□□□□ -0.97
VPS33B-203ENST00000554264 TSC1Q92574 1164 aa8.99□□□□□ -0.97
VPS33B-203ENST00000554264 PRXQ9BXM0 1461 aa8.99□□□□□ -0.97
VPS33B-203ENST00000554264 LOC105371045A0A1W2PR82 267 aa8.98□□□□□ -0.97
VPS33B-203ENST00000554264 MADDQ8WXG6 1647 aa8.98□□□□□ -0.97
VPS33B-203ENST00000554264 PTPRNQ16849 979 aa8.97□□□□□ -0.97
VPS33B-203ENST00000554264 CCDC24Q8N4L8 307 aa8.97□□□□□ -0.97
VPS33B-203ENST00000554264 LRRN4Q8WUT4 740 aa8.97□□□□□ -0.97
VPS33B-203ENST00000554264 NUDT12Q9BQG2 462 aa8.97□□□□□ -0.97
VPS33B-203ENST00000554264 POGZQ7Z3K3 1410 aa8.97□□□□□ -0.97
VPS33B-203ENST00000554264 FRMPD1Q5SYB0 1578 aa8.96□□□□□ -0.97
VPS33B-203ENST00000554264 AP1G2O75843 785 aa8.96□□□□□ -0.98
VPS33B-203ENST00000554264 PRKD2Q9BZL6 878 aa8.96□□□□□ -0.98
VPS33B-203ENST00000554264 EVA1BQ9NVM1 165 aa8.96□□□□□ -0.98
VPS33B-203ENST00000554264 ARHGEF40Q8TER5 1519 aa8.95□□□□□ -0.98
VPS33B-203ENST00000554264 CCNYL3P0C7X3 344 aa8.95□□□□□ -0.98
VPS33B-203ENST00000554264 DENND4BO75064 1496 aaPredicted RBP8.95□□□□□ -0.98
VPS33B-203ENST00000554264 F12P00748 615 aaPredicted RBP8.94□□□□□ -0.98
VPS33B-203ENST00000554264 SLC19A1P41440 591 aa8.94□□□□□ -0.98
VPS33B-203ENST00000554264 MAP10Q9P2G4 905 aa8.94□□□□□ -0.98
VPS33B-203ENST00000554264 FHOD3Q2V2M9 1422 aa8.94□□□□□ -0.98
VPS33B-203ENST00000554264 AKNAQ7Z591 1439 aa8.94□□□□□ -0.98
VPS33B-203ENST00000554264 FANCAO15360 1455 aa8.94□□□□□ -0.98
VPS33B-203ENST00000554264 RAPGEF6Q8TEU7 1601 aa8.94□□□□□ -0.98
VPS33B-203ENST00000554264 HSPA2P54652 639 aa8.93□□□□□ -0.98
VPS33B-203ENST00000554264 KCNH2Q12809 1159 aa8.93□□□□□ -0.98
VPS33B-203ENST00000554264 PPARGC1BQ86YN6 1023 aaKnown RBP8.93□□□□□ -0.98
VPS33B-203ENST00000554264 HELBQ8NG08 1087 aaPredicted RBP8.93□□□□□ -0.98
VPS33B-203ENST00000554264 HMX1Q9NP08 348 aaPredicted RBP8.93□□□□□ -0.98
VPS33B-203ENST00000554264 RIMS1Q86UR5 1692 aaKnown RBP8.93□□□□□ -0.98
VPS33B-203ENST00000554264 SAMD9Q5K651 1589 aa8.92□□□□□ -0.98
VPS33B-203ENST00000554264 EEA1Q15075 1411 aa8.92□□□□□ -0.98
VPS33B-203ENST00000554264 PLEKHD1A6NEE1 506 aa8.92□□□□□ -0.98
VPS33B-203ENST00000554264 USP17L8P0C7I0 530 aa8.92□□□□□ -0.98
VPS33B-203ENST00000554264 TMEM259Q4ZIN3 620 aa8.92□□□□□ -0.98
VPS33B-203ENST00000554264 EPS8L1Q8TE68 723 aa8.92□□□□□ -0.98
VPS33B-203ENST00000554264 NUP153P49790 1475 aaKnown RBP8.91□□□□□ -0.98
VPS33B-203ENST00000554264 MAGI2Q86UL8 1455 aa8.91□□□□□ -0.98
VPS33B-203ENST00000554264 SPRYD7Q5W111 196 aa8.91□□□□□ -0.98
VPS33B-203ENST00000554264 SNRKQ9NRH2 765 aa8.91□□□□□ -0.98
VPS33B-203ENST00000554264 CFAP74Q9C0B2 1584 aa8.9□□□□□ -0.98
VPS33B-203ENST00000554264 EFCAB5A4FU69 1503 aa8.9□□□□□ -0.98
VPS33B-203ENST00000554264 ZMYM4Q5VZL5 1548 aa8.9□□□□□ -0.98
VPS33B-203ENST00000554264 ZFYVE16Q7Z3T8 1539 aa8.9□□□□□ -0.98
VPS33B-203ENST00000554264 RGS20O76081 388 aa8.9□□□□□ -0.98
VPS33B-203ENST00000554264 CTHP32929 405 aa8.9□□□□□ -0.98
VPS33B-203ENST00000554264 RPIAP49247 311 aa8.9□□□□□ -0.98
VPS33B-203ENST00000554264 UNC93B1Q9H1C4 597 aa8.9□□□□□ -0.98
VPS33B-203ENST00000554264 V9GY48 417 aaPredicted RBP8.9□□□□□ -0.98
VPS33B-203ENST00000554264 RICTORQ6R327 1708 aa8.89□□□□□ -0.99
VPS33B-203ENST00000554264 SKOR1P84550 965 aa8.89□□□□□ -0.99
VPS33B-203ENST00000554264 NR6A1Q15406 480 aa8.89□□□□□ -0.99
VPS33B-203ENST00000554264 TRIM32Q13049 653 aa8.88□□□□□ -0.99
VPS33B-203ENST00000554264 BANK1Q8NDB2 785 aa8.88□□□□□ -0.99
VPS33B-203ENST00000554264 BAP1Q92560 729 aa8.88□□□□□ -0.99
VPS33B-203ENST00000554264 TRIM34Q9BYJ4 488 aa8.88□□□□□ -0.99
VPS33B-203ENST00000554264 YEATS2Q9ULM3 1422 aa8.88□□□□□ -0.99
VPS33B-203ENST00000554264 TTC37Q6PGP7 1564 aa8.87□□□□□ -0.99
VPS33B-203ENST00000554264 MLECQ14165 292 aa8.87□□□□□ -0.99
VPS33B-203ENST00000554264 MTMR14Q8NCE2 650 aa8.87□□□□□ -0.99
VPS33B-203ENST00000554264 GJD4Q96KN9 370 aaPredicted RBP8.87□□□□□ -0.99
VPS33B-203ENST00000554264 DISP3Q9P2K9 1392 aa8.86□□□□□ -0.99
VPS33B-203ENST00000554264 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.86□□□□□ -0.99
VPS33B-203ENST00000554264 SOCS7O14512 581 aa8.86□□□□□ -0.99
VPS33B-203ENST00000554264 ZBTB24O43167 697 aaPredicted RBP8.86□□□□□ -0.99
VPS33B-203ENST00000554264 TRIM67Q6ZTA4 783 aa8.86□□□□□ -0.99
VPS33B-203ENST00000554264 ZNF598Q86UK7 904 aaKnown RBP8.86□□□□□ -0.99
VPS33B-203ENST00000554264 HECW1Q76N89 1606 aa8.85□□□□□ -0.99
VPS33B-203ENST00000554264 CD2BP2O95400 341 aaKnown RBP8.85□□□□□ -0.99
VPS33B-203ENST00000554264 SH3BP2P78314 561 aa8.85□□□□□ -0.99
VPS33B-203ENST00000554264 MYT1Q01538 1121 aa8.85□□□□□ -0.99
VPS33B-203ENST00000554264 SCAPERQ9BY12 1400 aa8.85□□□□□ -0.99
VPS33B-203ENST00000554264 ATP10AO60312 1499 aa8.84□□□□□ -0.99
VPS33B-203ENST00000554264 FER1L4A9Z1Z3 1794 aa8.84□□□□□ -0.99
VPS33B-203ENST00000554264 LINC01559Q495D7 138 aa8.84□□□□□ -0.99
VPS33B-203ENST00000554264 ZNF697Q5TEC3 545 aa8.84□□□□□ -0.99
VPS33B-203ENST00000554264 C9orf84Q5VXU9 1444 aa8.84□□□□□ -0.99
VPS33B-203ENST00000554264 PKD2L1Q9P0L9 805 aa8.84□□□□□ -0.99
VPS33B-203ENST00000554264 ARHGEF12Q9NZN5 1544 aa8.84□□□□□ -0.99
VPS33B-203ENST00000554264 PLCH2O75038 1416 aa8.83□□□□□ -1
VPS33B-203ENST00000554264 RANGAP1P46060 587 aaPredicted RBP8.83□□□□□ -1
VPS33B-203ENST00000554264 ILDR2Q71H61 639 aa8.83□□□□□ -1
VPS33B-203ENST00000554264 PREX1Q8TCU6 1659 aa8.83□□□□□ -1
VPS33B-203ENST00000554264 SIGLEC1Q9BZZ2 1709 aa8.83□□□□□ -1
VPS33B-203ENST00000554264 UHRF1BP1Q6BDS2 1440 aa8.82□□□□□ -1
VPS33B-203ENST00000554264 GDF9O60383 454 aa8.82□□□□□ -1
VPS33B-203ENST00000554264 GPR37L1O60883 481 aa8.82□□□□□ -1
VPS33B-203ENST00000554264 EFCAB2Q5VUJ9 269 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms