RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 OVOS2Q6IE36 1432 aa12.63□□□□□ -0.39
TDP1-208ENST00000553989 C11orf95C9JLR9 678 aaPredicted RBP12.63□□□□□ -0.39
TDP1-208ENST00000553989 NEUROD1Q13562 356 aa12.63□□□□□ -0.39
TDP1-208ENST00000553989 DDB1Q16531 1140 aa12.63□□□□□ -0.39
TDP1-208ENST00000553989 ROCK2O75116 1388 aaKnown RBP12.63□□□□□ -0.39
TDP1-208ENST00000553989 PARP4Q9UKK3 1724 aaKnown RBP12.62□□□□□ -0.39
TDP1-208ENST00000553989 AATKQ6ZMQ8 1374 aa12.62□□□□□ -0.39
TDP1-208ENST00000553989 CSB-PGBD3P0DP91 1061 aa12.62□□□□□ -0.39
TDP1-208ENST00000553989 PPP1R1BQ9UD71 204 aaPredicted RBP12.62□□□□□ -0.39
TDP1-208ENST00000553989 NUP188Q5SRE5 1749 aa12.62□□□□□ -0.39
TDP1-208ENST00000553989 SLIT3O75094 1523 aa12.62□□□□□ -0.39
TDP1-208ENST00000553989 RREB1Q92766 1687 aa12.61□□□□□ -0.39
TDP1-208ENST00000553989 LRRC37A3O60309 1634 aa12.6□□□□□ -0.39
TDP1-208ENST00000553989 TRPM1Q7Z4N2 1603 aa12.6□□□□□ -0.39
TDP1-208ENST00000553989 KCNH5Q8NCM2 988 aa12.6□□□□□ -0.39
TDP1-208ENST00000553989 SIN3AQ96ST3 1273 aa12.6□□□□□ -0.39
TDP1-208ENST00000553989 CPSF1Q10570 1443 aaKnown RBP12.6□□□□□ -0.39
TDP1-208ENST00000553989 PIK3C2AO00443 1686 aa12.6□□□□□ -0.39
TDP1-208ENST00000553989 AMER1Q5JTC6 1135 aaPredicted RBP12.59□□□□□ -0.39
TDP1-208ENST00000553989 ZNF692Q9BU19 519 aaPredicted RBP12.59□□□□□ -0.39
TDP1-208ENST00000553989 TTC21BQ7Z4L5 1316 aa12.59□□□□□ -0.39
TDP1-208ENST00000553989 WDR17Q8IZU2 1322 aa12.59□□□□□ -0.39
TDP1-208ENST00000553989 TTC21AQ8NDW8 1320 aa12.58□□□□□ -0.4
TDP1-208ENST00000553989 KTN1Q86UP2 1357 aaKnown RBP12.57□□□□□ -0.4
TDP1-208ENST00000553989 FKBP8Q14318 412 aa12.57□□□□□ -0.4
TDP1-208ENST00000553989 CDCA7Q9BWT1 371 aaPredicted RBP12.57□□□□□ -0.4
TDP1-208ENST00000553989 SPON1Q9HCB6 807 aa12.57□□□□□ -0.4
TDP1-208ENST00000553989 AXIN2Q9Y2T1 843 aa12.57□□□□□ -0.4
TDP1-208ENST00000553989 DCAF8L1A6NGE4 600 aa12.56□□□□□ -0.4
TDP1-208ENST00000553989 ARHGEF25Q86VW2 580 aa12.56□□□□□ -0.4
TDP1-208ENST00000553989 BCL11BQ9C0K0 894 aaPredicted RBP12.56□□□□□ -0.4
TDP1-208ENST00000553989 PEAK1Q9H792 1746 aa12.55□□□□□ -0.4
TDP1-208ENST00000553989 KCNQ2O43526 872 aa12.55□□□□□ -0.4
TDP1-208ENST00000553989 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.55□□□□□ -0.4
TDP1-208ENST00000553989 AKAP12Q02952 1782 aa12.55□□□□□ -0.4
TDP1-208ENST00000553989 WNK3Q9BYP7 1800 aa12.55□□□□□ -0.4
TDP1-208ENST00000553989 COL18A1P39060 1754 aa12.54□□□□□ -0.4
TDP1-208ENST00000553989 EXOC5O00471 708 aa12.54□□□□□ -0.4
TDP1-208ENST00000553989 PLSCR1O15162 318 aa12.54□□□□□ -0.4
TDP1-208ENST00000553989 MARCH10Q8NA82 808 aaPredicted RBP12.54□□□□□ -0.4
TDP1-208ENST00000553989 TMC1Q8TDI8 760 aa12.54□□□□□ -0.4
TDP1-208ENST00000553989 CARD10Q9BWT7 1032 aa12.54□□□□□ -0.4
TDP1-208ENST00000553989 PTF1AQ7RTS3 328 aa12.53□□□□□ -0.4
TDP1-208ENST00000553989 CARD11Q9BXL7 1154 aa12.53□□□□□ -0.4
TDP1-208ENST00000553989 ANO8Q9HCE9 1232 aaPredicted RBP12.53□□□□□ -0.4
TDP1-208ENST00000553989 CCDC7Q96M83 1385 aa12.53□□□□□ -0.4
TDP1-208ENST00000553989 RGPD3A6NKT7 1758 aaPredicted RBP12.53□□□□□ -0.4
TDP1-208ENST00000553989 RGPD4Q7Z3J3 1758 aa12.53□□□□□ -0.4
TDP1-208ENST00000553989 RGPD5Q99666 1765 aa12.52□□□□□ -0.41
TDP1-208ENST00000553989 YY1P25490 414 aa12.52□□□□□ -0.41
TDP1-208ENST00000553989 RTN4Q9NQC3 1192 aaKnown RBP12.52□□□□□ -0.41
TDP1-208ENST00000553989 SBF2Q86WG5 1849 aa12.52□□□□□ -0.41
TDP1-208ENST00000553989 NFAT5O94916 1531 aa12.52□□□□□ -0.41
TDP1-208ENST00000553989 HDGFL2Q7Z4V5 671 aaPredicted RBP12.51□□□□□ -0.41
TDP1-208ENST00000553989 NLRP2Q9NX02 1062 aa12.51□□□□□ -0.41
TDP1-208ENST00000553989 STK32BQ9NY57 414 aa12.51□□□□□ -0.41
TDP1-208ENST00000553989 NINLQ9Y2I6 1382 aa12.51□□□□□ -0.41
TDP1-208ENST00000553989 ZBTB7AO95365 584 aa12.5□□□□□ -0.41
TDP1-208ENST00000553989 NME9Q86XW9 330 aa12.5□□□□□ -0.41
TDP1-208ENST00000553989 BCL9O00512 1426 aa12.5□□□□□ -0.41
TDP1-208ENST00000553989 TNS2Q63HR2 1409 aa12.5□□□□□ -0.41
TDP1-208ENST00000553989 ABCC6O95255 1503 aa12.5□□□□□ -0.41
TDP1-208ENST00000553989 MON2Q7Z3U7 1717 aa12.5□□□□□ -0.41
TDP1-208ENST00000553989 TONSLQ96HA7 1378 aa12.49□□□□□ -0.41
TDP1-208ENST00000553989 SBNO2Q9Y2G9 1366 aa12.49□□□□□ -0.41
TDP1-208ENST00000553989 TXNRD1Q16881 649 aa12.49□□□□□ -0.41
TDP1-208ENST00000553989 ACSBG1Q96GR2 724 aa12.49□□□□□ -0.41
TDP1-208ENST00000553989 ERBB3P21860 1342 aa12.48□□□□□ -0.41
TDP1-208ENST00000553989 USP31Q70CQ4 1352 aa12.47□□□□□ -0.41
TDP1-208ENST00000553989 IL2RBP14784 551 aa12.47□□□□□ -0.41
TDP1-208ENST00000553989 PROM2Q8N271 834 aa12.47□□□□□ -0.41
TDP1-208ENST00000553989 ANKRD24Q8TF21 1146 aa12.47□□□□□ -0.41
TDP1-208ENST00000553989 PDGFDQ9GZP0 370 aaPredicted RBP12.47□□□□□ -0.41
TDP1-208ENST00000553989 SLC12A5Q9H2X9 1139 aa12.47□□□□□ -0.41
TDP1-208ENST00000553989 TERF2IPQ9NYB0 399 aa12.47□□□□□ -0.41
TDP1-208ENST00000553989 ATF5Q9Y2D1 282 aaPredicted RBP12.47□□□□□ -0.41
TDP1-208ENST00000553989 CASZ1Q86V15 1759 aa12.46□□□□□ -0.41
TDP1-208ENST00000553989 SLC15A2Q16348 729 aa12.46□□□□□ -0.41
TDP1-208ENST00000553989 CD163L1Q9NR16 1453 aa12.46□□□□□ -0.42
TDP1-208ENST00000553989 LTN1O94822 1766 aa12.46□□□□□ -0.42
TDP1-208ENST00000553989 EDC4Q6P2E9 1401 aaKnown RBP12.45□□□□□ -0.42
TDP1-208ENST00000553989 SAMD1Q6SPF0 538 aaPredicted RBP12.45□□□□□ -0.42
TDP1-208ENST00000553989 LTV1Q96GA3 475 aaPredicted RBP12.45□□□□□ -0.42
TDP1-208ENST00000553989 NHSQ6T4R5 1651 aa12.45□□□□□ -0.42
TDP1-208ENST00000553989 A0A1W2PP64 1363 aa12.44□□□□□ -0.42
TDP1-208ENST00000553989 MYOM1P52179 1685 aa12.44□□□□□ -0.42
TDP1-208ENST00000553989 USP54Q70EL1 1684 aa12.44□□□□□ -0.42
TDP1-208ENST00000553989 MTFR1LQ9H019 292 aa12.43□□□□□ -0.42
TDP1-208ENST00000553989 DDX54Q8TDD1 881 aaKnown RBP12.42□□□□□ -0.42
TDP1-208ENST00000553989 PTGER2P43116 358 aa12.41□□□□□ -0.42
TDP1-208ENST00000553989 SYTL4Q96C24 671 aaPredicted RBP12.41□□□□□ -0.42
TDP1-208ENST00000553989 COG3Q96JB2 828 aa12.41□□□□□ -0.42
TDP1-208ENST00000553989 FHDC1Q9C0D6 1143 aaPredicted RBP12.41□□□□□ -0.42
TDP1-208ENST00000553989 AMPHP49418 695 aa12.4□□□□□ -0.42
TDP1-208ENST00000553989 IP6K1Q92551 441 aa12.4□□□□□ -0.42
TDP1-208ENST00000553989 KAT6BQ8WYB5 2073 aa12.4□□□□□ -0.42
TDP1-208ENST00000553989 BTAF1O14981 1849 aa12.39□□□□□ -0.43
TDP1-208ENST00000553989 KLHL34Q8N239 644 aa12.39□□□□□ -0.43
TDP1-208ENST00000553989 PUS7Q96PZ0 661 aaKnown RBP12.39□□□□□ -0.43
TDP1-208ENST00000553989 ST20-MTHFSA0A0A6YYL1 179 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms