RNA–Protein interactions for RNA: ENST00000553899.5

PSMC6-205, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-205ENST00000553899 MTHFSP49914 203 aa18.36■□□□□ 0.53
PSMC6-205ENST00000553899 RRS1Q15050 365 aaKnown RBP18.36■□□□□ 0.53
PSMC6-205ENST00000553899 PLCH1Q4KWH8 1693 aa18.36■□□□□ 0.53
PSMC6-205ENST00000553899 PEAK1Q9H792 1746 aa18.35■□□□□ 0.53
PSMC6-205ENST00000553899 FAM208AQ9UK61 1670 aaKnown RBP18.35■□□□□ 0.53
PSMC6-205ENST00000553899 CAMTA1Q9Y6Y1 1673 aa18.35■□□□□ 0.53
PSMC6-205ENST00000553899 TNNT2P45379 298 aaPredicted RBP18.35■□□□□ 0.53
PSMC6-205ENST00000553899 NGLY1Q96IV0 654 aa18.35■□□□□ 0.53
PSMC6-205ENST00000553899 SOX12O15370 315 aa18.34■□□□□ 0.53
PSMC6-205ENST00000553899 MEX3CQ5U5Q3 659 aaKnown RBP18.34■□□□□ 0.53
PSMC6-205ENST00000553899 EMILIN1Q9Y6C2 1016 aa18.34■□□□□ 0.53
PSMC6-205ENST00000553899 FBLN1P23142 703 aa18.33■□□□□ 0.52
PSMC6-205ENST00000553899 CFAP53Q96M91 514 aa18.33■□□□□ 0.52
PSMC6-205ENST00000553899 AXIN2Q9Y2T1 843 aa18.33■□□□□ 0.52
PSMC6-205ENST00000553899 COL5A2P05997 1499 aaPredicted RBP18.33■□□□□ 0.52
PSMC6-205ENST00000553899 BCL9LQ86UU0 1499 aa18.33■□□□□ 0.52
PSMC6-205ENST00000553899 RGPD5Q99666 1765 aa18.32■□□□□ 0.52
PSMC6-205ENST00000553899 NRAPQ86VF7 1730 aa18.32■□□□□ 0.52
PSMC6-205ENST00000553899 ERBB3P21860 1342 aa18.32■□□□□ 0.52
PSMC6-205ENST00000553899 C8orf37Q96NL8 207 aa18.32■□□□□ 0.52
PSMC6-205ENST00000553899 BTG4Q9NY30 223 aa18.32■□□□□ 0.52
PSMC6-205ENST00000553899 PLEKHG5O94827 1062 aa18.31■□□□□ 0.52
PSMC6-205ENST00000553899 CHRNA2Q15822 529 aa18.31■□□□□ 0.52
PSMC6-205ENST00000553899 UNC5CLQ8IV45 518 aa18.31■□□□□ 0.52
PSMC6-205ENST00000553899 WDR17Q8IZU2 1322 aa18.3■□□□□ 0.52
PSMC6-205ENST00000553899 HSP90AB2PQ58FF8 381 aa18.3■□□□□ 0.52
PSMC6-205ENST00000553899 PLEKHG2Q9H7P9 1386 aa18.3■□□□□ 0.52
PSMC6-205ENST00000553899 COL3A1P02461 1466 aaPredicted RBP18.29■□□□□ 0.52
PSMC6-205ENST00000553899 PPM1GO15355 546 aaPredicted RBP18.29■□□□□ 0.52
PSMC6-205ENST00000553899 ZNF772Q68DY9 489 aaPredicted RBP18.29■□□□□ 0.52
PSMC6-205ENST00000553899 AFF2P51816 1311 aa18.27■□□□□ 0.52
PSMC6-205ENST00000553899 CRB1P82279 1406 aa18.27■□□□□ 0.52
PSMC6-205ENST00000553899 NCAPD2Q15021 1401 aa18.27■□□□□ 0.52
PSMC6-205ENST00000553899 EVA1CP58658 441 aa18.27■□□□□ 0.52
PSMC6-205ENST00000553899 VPS72Q15906 364 aa18.27■□□□□ 0.52
PSMC6-205ENST00000553899 ANKRD24Q8TF21 1146 aa18.27■□□□□ 0.52
PSMC6-205ENST00000553899 USP21Q9UK80 565 aa18.27■□□□□ 0.52
PSMC6-205ENST00000553899 CCER2I3L3R5 266 aa18.26■□□□□ 0.51
PSMC6-205ENST00000553899 DIAPH1O60610 1272 aaKnown RBP18.26■□□□□ 0.51
PSMC6-205ENST00000553899 CNGB1Q14028 1251 aaPredicted RBP18.26■□□□□ 0.51
PSMC6-205ENST00000553899 CARD10Q9BWT7 1032 aa18.26■□□□□ 0.51
PSMC6-205ENST00000553899 THRAP3Q9Y2W1 955 aaKnown RBP18.26■□□□□ 0.51
PSMC6-205ENST00000553899 RGPD1P0DJD0 1748 aa18.26■□□□□ 0.51
PSMC6-205ENST00000553899 IL13P35225 146 aa18.25■□□□□ 0.51
PSMC6-205ENST00000553899 EIF4A2Q14240 407 aaKnown RBP18.25■□□□□ 0.51
PSMC6-205ENST00000553899 TRPC5Q9UL62 973 aaPredicted RBP18.25■□□□□ 0.51
PSMC6-205ENST00000553899 NUDCQ9Y266 331 aa18.25■□□□□ 0.51
PSMC6-205ENST00000553899 ATRNO75882 1429 aa18.24■□□□□ 0.51
PSMC6-205ENST00000553899 ZBTB7CA1YPR0 619 aa18.24■□□□□ 0.51
PSMC6-205ENST00000553899 KDRP35968 1356 aa18.23■□□□□ 0.51
PSMC6-205ENST00000553899 SPATA31A5Q5VU36 1347 aa18.23■□□□□ 0.51
PSMC6-205ENST00000553899 SPATA31A7Q8IWB4 1347 aa18.23■□□□□ 0.51
PSMC6-205ENST00000553899 IGSF1Q8N6C5 1336 aa18.23■□□□□ 0.51
PSMC6-205ENST00000553899 CDCA7Q9BWT1 371 aaPredicted RBP18.22■□□□□ 0.51
PSMC6-205ENST00000553899 SPATA31A1Q5TZJ5 1347 aa18.22■□□□□ 0.51
PSMC6-205ENST00000553899 LARP1Q6PKG0 1096 aaKnown RBP18.21■□□□□ 0.51
PSMC6-205ENST00000553899 BARGINQ6ZT62 677 aa18.21■□□□□ 0.51
PSMC6-205ENST00000553899 ONECUT3O60422 494 aaPredicted RBP18.2■□□□□ 0.5
PSMC6-205ENST00000553899 CSB-PGBD3P0DP91 1061 aa18.2■□□□□ 0.5
PSMC6-205ENST00000553899 TOM1L2Q6ZVM7 507 aa18.2■□□□□ 0.5
PSMC6-205ENST00000553899 GJD4Q96KN9 370 aaPredicted RBP18.2■□□□□ 0.5
PSMC6-205ENST00000553899 QTRT2Q9H974 415 aaKnown RBP18.2■□□□□ 0.5
PSMC6-205ENST00000553899 STRN4Q9NRL3 753 aa18.2■□□□□ 0.5
PSMC6-205ENST00000553899 NBPF6Q5VWK0 638 aa18.19■□□□□ 0.5
PSMC6-205ENST00000553899 NBPF4Q96M43 638 aa18.19■□□□□ 0.5
PSMC6-205ENST00000553899 EYA1Q99502 592 aa18.19■□□□□ 0.5
PSMC6-205ENST00000553899 NLRP2Q9NX02 1062 aa18.19■□□□□ 0.5
PSMC6-205ENST00000553899 RGPD2P0DJD1 1756 aa18.18■□□□□ 0.5
PSMC6-205ENST00000553899 FCHSD2O94868 740 aa18.18■□□□□ 0.5
PSMC6-205ENST00000553899 TCP11L2Q8N4U5 519 aa18.18■□□□□ 0.5
PSMC6-205ENST00000553899 PNNQ9H307 717 aaKnown RBP18.18■□□□□ 0.5
PSMC6-205ENST00000553899 RGS17Q9UGC6 210 aaPredicted RBP18.17■□□□□ 0.5
PSMC6-205ENST00000553899 RBM6P78332 1123 aaKnown RBP18.16■□□□□ 0.5
PSMC6-205ENST00000553899 PNISRQ8TF01 805 aaKnown RBP18.16■□□□□ 0.5
PSMC6-205ENST00000553899 LTV1Q96GA3 475 aaPredicted RBP18.16■□□□□ 0.5
PSMC6-205ENST00000553899 MRS2Q9HD23 443 aa18.16■□□□□ 0.5
PSMC6-205ENST00000553899 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.16■□□□□ 0.55e-8■■□□□ 12.4
PSMC6-205ENST00000553899 WNK3Q9BYP7 1800 aa18.15■□□□□ 0.5
PSMC6-205ENST00000553899 MIER1Q8N108 512 aa18.15■□□□□ 0.5
PSMC6-205ENST00000553899 GLI3P10071 1580 aa18.15■□□□□ 0.5
PSMC6-205ENST00000553899 DISP2A7MBM2 1401 aa18.15■□□□□ 0.5
PSMC6-205ENST00000553899 PARP4Q9UKK3 1724 aaKnown RBP18.14■□□□□ 0.49
PSMC6-205ENST00000553899 IL2RBP14784 551 aa18.13■□□□□ 0.49
PSMC6-205ENST00000553899 WDR43Q15061 677 aaKnown RBP eCLIP18.13■□□□□ 0.49
PSMC6-205ENST00000553899 U2SURPO15042 1029 aaKnown RBP18.12■□□□□ 0.49
PSMC6-205ENST00000553899 U2AF1L5P0DN76 240 aaPredicted RBP18.12■□□□□ 0.49
PSMC6-205ENST00000553899 U2AF1Q01081 240 aaKnown RBP eCLIP18.12■□□□□ 0.49
PSMC6-205ENST00000553899 SULT6B1Q6IMI4 303 aa18.12■□□□□ 0.49
PSMC6-205ENST00000553899 RAPGEF4Q8WZA2 1011 aa18.12■□□□□ 0.49
PSMC6-205ENST00000553899 CCDC9Q9Y3X0 531 aaKnown RBP18.12■□□□□ 0.49
PSMC6-205ENST00000553899 THSD7AQ9UPZ6 1657 aa18.12■□□□□ 0.49
PSMC6-205ENST00000553899 RXRBP28702 533 aa18.11■□□□□ 0.49
PSMC6-205ENST00000553899 OVOS2A0A0G2JMS6 1433 aa18.11■□□□□ 0.49
PSMC6-205ENST00000553899 AMOTQ4VCS5 1084 aa18.1■□□□□ 0.49
PSMC6-205ENST00000553899 CCDC184Q52MB2 194 aa18.1■□□□□ 0.49
PSMC6-205ENST00000553899 RSPH6AQ9H0K4 717 aa18.1■□□□□ 0.49
PSMC6-205ENST00000553899 PKD1L3Q7Z443 1732 aa18.09■□□□□ 0.49
PSMC6-205ENST00000553899 TATP17735 454 aaPredicted RBP18.09■□□□□ 0.49
PSMC6-205ENST00000553899 POTEAQ6S8J7 498 aa18.08■□□□□ 0.48
PSMC6-205ENST00000553899 USP35Q9P2H5 1018 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms