RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 ARHGEF25Q86VW2 580 aa18.89■□□□□ 0.61
PRKCH-206ENST00000553830 JCADQ9P266 1359 aa18.89■□□□□ 0.61
PRKCH-206ENST00000553830 RGPD2P0DJD1 1756 aa18.88■□□□□ 0.61
PRKCH-206ENST00000553830 DIAPH1O60610 1272 aaKnown RBP18.88■□□□□ 0.61
PRKCH-206ENST00000553830 YTHDC1Q96MU7 727 aaKnown RBP18.88■□□□□ 0.61
PRKCH-206ENST00000553830 PRDM11Q9NQV5 511 aa18.88■□□□□ 0.61
PRKCH-206ENST00000553830 COL18A1P39060 1754 aa18.88■□□□□ 0.61
PRKCH-206ENST00000553830 RTL1A6NKG5 1358 aa18.87■□□□□ 0.61
PRKCH-206ENST00000553830 ADAMTS2O95450 1211 aa18.87■□□□□ 0.61
PRKCH-206ENST00000553830 PNISRQ8TF01 805 aaKnown RBP18.87■□□□□ 0.61
PRKCH-206ENST00000553830 IP6K1Q92551 441 aa18.86■□□□□ 0.61
PRKCH-206ENST00000553830 EIF4A2Q14240 407 aaKnown RBP18.85■□□□□ 0.61
PRKCH-206ENST00000553830 NUDCQ9Y266 331 aa18.85■□□□□ 0.61
PRKCH-206ENST00000553830 SENP3-EIF4A1A0A087X0R7 540 aa18.84■□□□□ 0.61
PRKCH-206ENST00000553830 U2AF1L5P0DN76 240 aaPredicted RBP18.84■□□□□ 0.61
PRKCH-206ENST00000553830 U2AF1Q01081 240 aaKnown RBP eCLIP18.84■□□□□ 0.61
PRKCH-206ENST00000553830 CPDO75976 1380 aa18.83■□□□□ 0.61
PRKCH-206ENST00000553830 INSRP06213 1382 aa18.83■□□□□ 0.61
PRKCH-206ENST00000553830 KIF24Q5T7B8 1368 aa18.83■□□□□ 0.61
PRKCH-206ENST00000553830 IL13P35225 146 aa18.83■□□□□ 0.6
PRKCH-206ENST00000553830 COL14A1Q05707 1796 aaKnown RBP18.83■□□□□ 0.6
PRKCH-206ENST00000553830 PLCH1Q4KWH8 1693 aa18.82■□□□□ 0.6
PRKCH-206ENST00000553830 ADAMTS8Q9UP79 889 aa18.82■□□□□ 0.6
PRKCH-206ENST00000553830 AXIN2Q9Y2T1 843 aa18.82■□□□□ 0.6
PRKCH-206ENST00000553830 LMO7Q8WWI1 1683 aa18.82■□□□□ 0.6
PRKCH-206ENST00000553830 CSB-PGBD3P0DP91 1061 aa18.81■□□□□ 0.6
PRKCH-206ENST00000553830 CCDC146Q8IYE0 955 aa18.81■□□□□ 0.6
PRKCH-206ENST00000553830 ANKRD24Q8TF21 1146 aa18.81■□□□□ 0.6
PRKCH-206ENST00000553830 BLMP54132 1417 aaPredicted RBP18.81■□□□□ 0.6
PRKCH-206ENST00000553830 RGPD1P0DJD0 1748 aa18.8■□□□□ 0.6
PRKCH-206ENST00000553830 FAM83GA6ND36 823 aa18.8■□□□□ 0.6
PRKCH-206ENST00000553830 HMOX1P09601 288 aa18.8■□□□□ 0.6
PRKCH-206ENST00000553830 CAMTA1Q9Y6Y1 1673 aa18.79■□□□□ 0.6
PRKCH-206ENST00000553830 USHBP1Q8N6Y0 703 aa18.79■□□□□ 0.6
PRKCH-206ENST00000553830 FBXO41Q8TF61 875 aa18.79■□□□□ 0.6
PRKCH-206ENST00000553830 STRN4Q9NRL3 753 aa18.79■□□□□ 0.6
PRKCH-206ENST00000553830 ABCC6O95255 1503 aa18.79■□□□□ 0.6
PRKCH-206ENST00000553830 LRP6O75581 1613 aa18.78■□□□□ 0.6
PRKCH-206ENST00000553830 SPATA31A6Q5VVP1 1343 aa18.77■□□□□ 0.6
PRKCH-206ENST00000553830 MEX3CQ5U5Q3 659 aaKnown RBP18.77■□□□□ 0.6
PRKCH-206ENST00000553830 FAM208AQ9UK61 1670 aaKnown RBP18.76■□□□□ 0.59
PRKCH-206ENST00000553830 EVA1CP58658 441 aa18.76■□□□□ 0.59
PRKCH-206ENST00000553830 AEBP1Q8IUX7 1158 aa18.76■□□□□ 0.59
PRKCH-206ENST00000553830 EYA1Q99502 592 aa18.76■□□□□ 0.59
PRKCH-206ENST00000553830 NLRP2Q9NX02 1062 aa18.76■□□□□ 0.59
PRKCH-206ENST00000553830 BTG4Q9NY30 223 aa18.76■□□□□ 0.59
PRKCH-206ENST00000553830 SULT6B1Q6IMI4 303 aa18.75■□□□□ 0.59
PRKCH-206ENST00000553830 C8orf37Q96NL8 207 aa18.75■□□□□ 0.59
PRKCH-206ENST00000553830 COL5A2P05997 1499 aaPredicted RBP18.75■□□□□ 0.59
PRKCH-206ENST00000553830 ERBB3P21860 1342 aa18.74■□□□□ 0.59
PRKCH-206ENST00000553830 NRAPQ86VF7 1730 aa18.74■□□□□ 0.59
PRKCH-206ENST00000553830 PRKAR2BP31323 418 aa18.73■□□□□ 0.59
PRKCH-206ENST00000553830 HNRNPUQ00839 825 aaKnown RBP eCLIP18.73■□□□□ 0.59
PRKCH-206ENST00000553830 NBPF6Q5VWK0 638 aa18.73■□□□□ 0.59
PRKCH-206ENST00000553830 NBPF4Q96M43 638 aa18.73■□□□□ 0.59
PRKCH-206ENST00000553830 SALL2Q9Y467 1007 aaPredicted RBP18.73■□□□□ 0.59
PRKCH-206ENST00000553830 NWD2Q9ULI1 1742 aa18.72■□□□□ 0.59
PRKCH-206ENST00000553830 TOM1L2Q6ZVM7 507 aa18.72■□□□□ 0.59
PRKCH-206ENST00000553830 NGLY1Q96IV0 654 aa18.72■□□□□ 0.59
PRKCH-206ENST00000553830 IGSF1Q8N6C5 1336 aa18.72■□□□□ 0.59
PRKCH-206ENST00000553830 RSPH6AQ9H0K4 717 aa18.71■□□□□ 0.59
PRKCH-206ENST00000553830 MAPK8IP3Q9UPT6 1336 aa18.71■□□□□ 0.59
PRKCH-206ENST00000553830 LARP1Q6PKG0 1096 aaKnown RBP18.7■□□□□ 0.58
PRKCH-206ENST00000553830 RUNDC1Q96C34 613 aa18.7■□□□□ 0.58
PRKCH-206ENST00000553830 WDR17Q8IZU2 1322 aa18.7■□□□□ 0.58
PRKCH-206ENST00000553830 FCHSD2O94868 740 aa18.69■□□□□ 0.58
PRKCH-206ENST00000553830 NEFMP07197 916 aa18.69■□□□□ 0.58
PRKCH-206ENST00000553830 USP35Q9P2H5 1018 aa18.69■□□□□ 0.58
PRKCH-206ENST00000553830 RRP7AQ9Y3A4 280 aaKnown RBP18.69■□□□□ 0.58
PRKCH-206ENST00000553830 DLG5Q8TDM6 1919 aa18.68■□□□□ 0.58
PRKCH-206ENST00000553830 APAF1O14727 1248 aa18.68■□□□□ 0.58
PRKCH-206ENST00000553830 PNNQ9H307 717 aaKnown RBP18.68■□□□□ 0.58
PRKCH-206ENST00000553830 NEUROD2Q15784 382 aa18.67■□□□□ 0.58
PRKCH-206ENST00000553830 CCDC9Q9Y3X0 531 aaKnown RBP18.67■□□□□ 0.58
PRKCH-206ENST00000553830 SLIT2O94813 1529 aa18.66■□□□□ 0.58
PRKCH-206ENST00000553830 PHACTR3Q96KR7 559 aa18.66■□□□□ 0.58
PRKCH-206ENST00000553830 PLEKHF1Q96S99 279 aa18.66■□□□□ 0.58
PRKCH-206ENST00000553830 TCP11L2Q8N4U5 519 aa18.65■□□□□ 0.58
PRKCH-206ENST00000553830 CRB1P82279 1406 aa18.65■□□□□ 0.58
PRKCH-206ENST00000553830 WNK3Q9BYP7 1800 aa18.64■□□□□ 0.57
PRKCH-206ENST00000553830 KDRP35968 1356 aa18.64■□□□□ 0.57
PRKCH-206ENST00000553830 PARP4Q9UKK3 1724 aaKnown RBP18.63■□□□□ 0.57
PRKCH-206ENST00000553830 USP21Q9UK80 565 aa18.63■□□□□ 0.57
PRKCH-206ENST00000553830 AFF2P51816 1311 aa18.63■□□□□ 0.57
PRKCH-206ENST00000553830 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.63■□□□□ 0.57
PRKCH-206ENST00000553830 UNC5CLQ8IV45 518 aa18.62■□□□□ 0.57
PRKCH-206ENST00000553830 RAPGEF4Q8WZA2 1011 aa18.62■□□□□ 0.57
PRKCH-206ENST00000553830 CARD10Q9BWT7 1032 aa18.62■□□□□ 0.57
PRKCH-206ENST00000553830 NCAPD2Q15021 1401 aa18.62■□□□□ 0.57
PRKCH-206ENST00000553830 MEGF6O75095 1541 aa18.62■□□□□ 0.57
PRKCH-206ENST00000553830 TATP17735 454 aaPredicted RBP18.61■□□□□ 0.57
PRKCH-206ENST00000553830 VIRMAQ69YN4 1812 aaKnown RBP18.6■□□□□ 0.57
PRKCH-206ENST00000553830 BCL9LQ86UU0 1499 aa18.59■□□□□ 0.57
PRKCH-206ENST00000553830 TMPOP42166 694 aaKnown RBP18.59■□□□□ 0.57
PRKCH-206ENST00000553830 NFE2L2Q16236 605 aa18.59■□□□□ 0.57
PRKCH-206ENST00000553830 FNBP4Q8N3X1 1017 aaPredicted RBP18.59■□□□□ 0.57
PRKCH-206ENST00000553830 RIPK4P57078 832 aa18.58■□□□□ 0.56
PRKCH-206ENST00000553830 MTHFSDQ2M296 383 aaKnown RBP18.58■□□□□ 0.56
PRKCH-206ENST00000553830 PLEKHO1Q53GL0 409 aaPredicted RBP18.57■□□□□ 0.56
PRKCH-206ENST00000553830 PKD1L3Q7Z443 1732 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms