RNA–Protein interactions for RNA: ENST00000553817.1

KLHL28-203, Transcript of kelch like family member 28, humanhuman

TSL 4

Gene KLHL28, Length 550 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28-203ENST00000553817 RNF20Q5VTR2 975 aa6.5□□□□□ -1.37
KLHL28-203ENST00000553817 PHTF2Q8N3S3 785 aa6.5□□□□□ -1.37
KLHL28-203ENST00000553817 CCDC82Q8N4S0 544 aa6.5□□□□□ -1.37
KLHL28-203ENST00000553817 SNIP1Q8TAD8 396 aaKnown RBP6.5□□□□□ -1.37
KLHL28-203ENST00000553817 TNFRSF10AO00220 468 aa6.49□□□□□ -1.37
KLHL28-203ENST00000553817 PRR20EP86478 221 aa6.49□□□□□ -1.37
KLHL28-203ENST00000553817 PRR20CP86479 221 aa6.49□□□□□ -1.37
KLHL28-203ENST00000553817 PRR20DP86480 221 aa6.49□□□□□ -1.37
KLHL28-203ENST00000553817 PRR20BP86481 221 aa6.49□□□□□ -1.37
KLHL28-203ENST00000553817 PRR20AP86496 221 aa6.49□□□□□ -1.37
KLHL28-203ENST00000553817 TRIM67Q6ZTA4 783 aa6.49□□□□□ -1.37
KLHL28-203ENST00000553817 CCDC125Q86Z20 511 aa6.49□□□□□ -1.37
KLHL28-203ENST00000553817 RNF135Q8IUD6 432 aa6.49□□□□□ -1.37
KLHL28-203ENST00000553817 SEPT12Q8IYM1 358 aa6.49□□□□□ -1.37
KLHL28-203ENST00000553817 CYP4X1Q8N118 509 aa6.49□□□□□ -1.37
KLHL28-203ENST00000553817 NFATC2IPQ8NCF5 419 aa6.49□□□□□ -1.37
KLHL28-203ENST00000553817 UCN2Q96RP3 112 aa6.49□□□□□ -1.37
KLHL28-203ENST00000553817 TTC24A2A3L6 582 aaPredicted RBP6.48□□□□□ -1.37
KLHL28-203ENST00000553817 ADH1CP00326 375 aa6.48□□□□□ -1.37
KLHL28-203ENST00000553817 ALDH1A1P00352 501 aa6.48□□□□□ -1.37
KLHL28-203ENST00000553817 GRM5P41594 1212 aa6.48□□□□□ -1.37
KLHL28-203ENST00000553817 NR5A1Q13285 461 aa6.48□□□□□ -1.37
KLHL28-203ENST00000553817 INTS6LQ5JSJ4 861 aaKnown RBP6.48□□□□□ -1.37
KLHL28-203ENST00000553817 PPP1R12CQ9BZL4 782 aa6.48□□□□□ -1.37
KLHL28-203ENST00000553817 PIK3CDO00329 1044 aa6.47□□□□□ -1.37
KLHL28-203ENST00000553817 SKIP12755 728 aa6.47□□□□□ -1.37
KLHL28-203ENST00000553817 FSHRP23945 695 aa6.47□□□□□ -1.37
KLHL28-203ENST00000553817 TBC1D9Q6ZT07 1266 aa6.47□□□□□ -1.37
KLHL28-203ENST00000553817 TOR4AQ9NXH8 423 aa6.47□□□□□ -1.37
KLHL28-203ENST00000553817 TFIP11Q9UBB9 837 aaKnown RBP6.47□□□□□ -1.37
KLHL28-203ENST00000553817 CHIC2Q9UKJ5 165 aa6.47□□□□□ -1.37
KLHL28-203ENST00000553817 WASF2Q9Y6W5 498 aa6.47□□□□□ -1.37
KLHL28-203ENST00000553817 PALM3A6NDB9 673 aaPredicted RBP6.46□□□□□ -1.38
KLHL28-203ENST00000553817 ATP9BO43861 1147 aa6.46□□□□□ -1.38
KLHL28-203ENST00000553817 RAB15P59190 212 aa6.46□□□□□ -1.38
KLHL28-203ENST00000553817 DHX9Q08211 1270 aaKnown RBP6.46□□□□□ -1.38
KLHL28-203ENST00000553817 MAP7D1Q3KQU3 841 aa6.46□□□□□ -1.38
KLHL28-203ENST00000553817 ARID3AQ99856 593 aa6.46□□□□□ -1.38
KLHL28-203ENST00000553817 J3QL48 77 aa6.45□□□□□ -1.38
KLHL28-203ENST00000553817 CCDC116Q8IYX3 515 aa6.45□□□□□ -1.38
KLHL28-203ENST00000553817 PLPP7Q8NBV4 271 aa6.45□□□□□ -1.38
KLHL28-203ENST00000553817 CCDC85AQ96PX6 553 aaPredicted RBP6.45□□□□□ -1.38
KLHL28-203ENST00000553817 PDZRN3Q9UPQ7 1066 aa6.45□□□□□ -1.38
KLHL28-203ENST00000553817 USP17L5A8MUK1 530 aa6.44□□□□□ -1.38
KLHL28-203ENST00000553817 ERVH48-1M5A8F1 160 aa6.44□□□□□ -1.38
KLHL28-203ENST00000553817 LZTS3O60299 673 aaPredicted RBP6.44□□□□□ -1.38
KLHL28-203ENST00000553817 SMPD1P17405 629 aa6.44□□□□□ -1.38
KLHL28-203ENST00000553817 LMOD1P29536 600 aaPredicted RBP6.44□□□□□ -1.38
KLHL28-203ENST00000553817 NNTQ13423 1086 aa6.44□□□□□ -1.38
KLHL28-203ENST00000553817 TSGA10IPQ3SY00 556 aa6.44□□□□□ -1.38
KLHL28-203ENST00000553817 CFAP70Q5T0N1 1121 aa6.44□□□□□ -1.38
KLHL28-203ENST00000553817 TRIM52Q96A61 297 aa6.44□□□□□ -1.38
KLHL28-203ENST00000553817 DOLKQ9UPQ8 538 aa6.44□□□□□ -1.38
KLHL28-203ENST00000553817 PCDHB11Q9Y5F2 797 aa6.44□□□□□ -1.38
KLHL28-203ENST00000553817 MAFBQ9Y5Q3 323 aaPredicted RBP6.44□□□□□ -1.38
KLHL28-203ENST00000553817 NR3C2P08235 984 aa6.43□□□□□ -1.38
KLHL28-203ENST00000553817 PPP1R26Q5T8A7 1209 aaPredicted RBP6.43□□□□□ -1.38
KLHL28-203ENST00000553817 TRAF7Q6Q0C0 670 aa6.43□□□□□ -1.38
KLHL28-203ENST00000553817 PLEKHM2Q8IWE5 1019 aa6.43□□□□□ -1.38
KLHL28-203ENST00000553817 USP17L3A6NCW0 530 aa6.42□□□□□ -1.38
KLHL28-203ENST00000553817 USP17L4A6NCW7 530 aa6.42□□□□□ -1.38
KLHL28-203ENST00000553817 RFX1P22670 979 aa6.42□□□□□ -1.38
KLHL28-203ENST00000553817 USP17L2Q6R6M4 530 aa6.42□□□□□ -1.38
KLHL28-203ENST00000553817 USP17L1Q7RTZ2 530 aa6.42□□□□□ -1.38
KLHL28-203ENST00000553817 CDCA7Q9BWT1 371 aaPredicted RBP6.42□□□□□ -1.38
KLHL28-203ENST00000553817 PGPEP1Q9NXJ5 209 aa6.42□□□□□ -1.38
KLHL28-203ENST00000553817 EMILIN1Q9Y6C2 1016 aa6.42□□□□□ -1.38
KLHL28-203ENST00000553817 GFRA3O60609 400 aa6.41□□□□□ -1.38
KLHL28-203ENST00000553817 USP4Q13107 963 aa6.41□□□□□ -1.38
KLHL28-203ENST00000553817 NCOA4Q13772 614 aa6.41□□□□□ -1.38
KLHL28-203ENST00000553817 EML3Q32P44 896 aa6.41□□□□□ -1.38
KLHL28-203ENST00000553817 OXLD1Q5BKU9 147 aa6.41□□□□□ -1.38
KLHL28-203ENST00000553817 DEPDC4Q8N2C3 294 aa6.41□□□□□ -1.38
KLHL28-203ENST00000553817 SIRT1Q96EB6 747 aa6.41□□□□□ -1.38
KLHL28-203ENST00000553817 TMPRSS4Q9NRS4 437 aa6.41□□□□□ -1.38
KLHL28-203ENST00000553817 MYCP01106 439 aaPredicted RBP6.4□□□□□ -1.38
KLHL28-203ENST00000553817 MYT1Q01538 1121 aa6.4□□□□□ -1.38
KLHL28-203ENST00000553817 CC2D2BQ6DHV5 1058 aa6.4□□□□□ -1.38
KLHL28-203ENST00000553817 ZNF784Q8NCA9 323 aaPredicted RBP6.4□□□□□ -1.38
KLHL28-203ENST00000553817 HPS1Q92902 700 aa6.4□□□□□ -1.38
KLHL28-203ENST00000553817 NOD1Q9Y239 953 aa6.4□□□□□ -1.38
KLHL28-203ENST00000553817 FAM187AA6NFU0 413 aa6.39□□□□□ -1.39
KLHL28-203ENST00000553817 NRG2O14511 850 aaPredicted RBP6.39□□□□□ -1.39
KLHL28-203ENST00000553817 PPP1R15AO75807 674 aaPredicted RBP6.39□□□□□ -1.39
KLHL28-203ENST00000553817 WDR4P57081 412 aaKnown RBP6.39□□□□□ -1.39
KLHL28-203ENST00000553817 ERVK-9P63128 1117 aa6.39□□□□□ -1.39
KLHL28-203ENST00000553817 LAPTM4AQ15012 233 aa6.39□□□□□ -1.39
KLHL28-203ENST00000553817 PBXIP1Q96AQ6 731 aa6.39□□□□□ -1.39
KLHL28-203ENST00000553817 KLF16Q9BXK1 252 aaPredicted RBP6.39□□□□□ -1.39
KLHL28-203ENST00000553817 ESF1Q9H501 851 aaKnown RBP6.39□□□□□ -1.39
KLHL28-203ENST00000553817 VRTNQ9H8Y1 702 aa6.39□□□□□ -1.39
KLHL28-203ENST00000553817 CYLDQ9NQC7 956 aa6.39□□□□□ -1.39
KLHL28-203ENST00000553817 MKRN1Q9UHC7 482 aaKnown RBP6.39□□□□□ -1.39
KLHL28-203ENST00000553817 ATP5J2-PTCD1G3V325 749 aa6.38□□□□□ -1.39
KLHL28-203ENST00000553817 LILRA1O75019 489 aa6.38□□□□□ -1.39
KLHL28-203ENST00000553817 DGAT1O75907 488 aa6.38□□□□□ -1.39
KLHL28-203ENST00000553817 ZIC2O95409 532 aaPredicted RBP6.38□□□□□ -1.39
KLHL28-203ENST00000553817 TIMP2P16035 220 aa6.38□□□□□ -1.39
KLHL28-203ENST00000553817 SCTRP47872 440 aa6.38□□□□□ -1.39
KLHL28-203ENST00000553817 SRPK2P78362 688 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms