RNA–Protein interactions for RNA: ENST00000553643.1

ATG2B-205, Transcript of autophagy related 2B, humanhuman

TSL 3

Gene ATG2B, Length 482 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG2B-205ENST00000553643 ARHGAP9Q9BRR9 750 aa9.38□□□□□ -0.91
ATG2B-205ENST00000553643 NXF1Q9UBU9 619 aaKnown RBP9.38□□□□□ -0.91
ATG2B-205ENST00000553643 IL27Q8NEV9 243 aa9.37□□□□□ -0.91
ATG2B-205ENST00000553643 PURBQ96QR8 312 aaKnown RBP9.37□□□□□ -0.91
ATG2B-205ENST00000553643 SOBPA7XYQ1 873 aa9.36□□□□□ -0.91
ATG2B-205ENST00000553643 SCARF1Q14162 830 aa9.36□□□□□ -0.91
ATG2B-205ENST00000553643 GPSM3Q9Y4H4 160 aa9.36□□□□□ -0.91
ATG2B-205ENST00000553643 NACADO15069 1562 aa9.35□□□□□ -0.91
ATG2B-205ENST00000553643 INSM1Q01101 510 aaPredicted RBP9.35□□□□□ -0.91
ATG2B-205ENST00000553643 CCDC116Q8IYX3 515 aa9.35□□□□□ -0.91
ATG2B-205ENST00000553643 GMPRP36959 345 aa9.34□□□□□ -0.91
ATG2B-205ENST00000553643 PTK2Q05397 1052 aa9.34□□□□□ -0.91
ATG2B-205ENST00000553643 ZBTB33Q86T24 672 aa9.34□□□□□ -0.91
ATG2B-205ENST00000553643 MEIOBQ8N635 442 aa9.34□□□□□ -0.91
ATG2B-205ENST00000553643 SLC16A10Q8TF71 515 aa9.34□□□□□ -0.91
ATG2B-205ENST00000553643 STK17AQ9UEE5 414 aa9.34□□□□□ -0.91
ATG2B-205ENST00000553643 EMILIN1Q9Y6C2 1016 aa9.34□□□□□ -0.91
ATG2B-205ENST00000553643 TMEM259Q4ZIN3 620 aa9.33□□□□□ -0.92
ATG2B-205ENST00000553643 SLC10A4Q96EP9 437 aa9.33□□□□□ -0.92
ATG2B-205ENST00000553643 TRIM34Q9BYJ4 488 aa9.33□□□□□ -0.92
ATG2B-205ENST00000553643 CDV3Q9UKY7 258 aaKnown RBP9.33□□□□□ -0.92
ATG2B-205ENST00000553643 TPRNQ4KMQ1 711 aa9.32□□□□□ -0.92
ATG2B-205ENST00000553643 ADAM32Q8TC27 787 aa9.32□□□□□ -0.92
ATG2B-205ENST00000553643 KCTD15Q96SI1 283 aaPredicted RBP9.32□□□□□ -0.92
ATG2B-205ENST00000553643 ERBB4Q15303 1308 aa9.31□□□□□ -0.92
ATG2B-205ENST00000553643 C6orf118Q5T5N4 469 aa9.31□□□□□ -0.92
ATG2B-205ENST00000553643 PPP1R26Q5T8A7 1209 aaPredicted RBP9.31□□□□□ -0.92
ATG2B-205ENST00000553643 LINC00528Q8N1L1 170 aa9.31□□□□□ -0.92
ATG2B-205ENST00000553643 PNMA1Q8ND90 353 aa9.31□□□□□ -0.92
ATG2B-205ENST00000553643 H3BM21 787 aa9.3□□□□□ -0.92
ATG2B-205ENST00000553643 NPAS3Q8IXF0 933 aa9.3□□□□□ -0.92
ATG2B-205ENST00000553643 INTS6LQ5JSJ4 861 aaKnown RBP9.29□□□□□ -0.92
ATG2B-205ENST00000553643 UPP2O95045 317 aa9.28□□□□□ -0.92
ATG2B-205ENST00000553643 BMP2P12643 396 aa9.28□□□□□ -0.92
ATG2B-205ENST00000553643 LORP23490 312 aaPredicted RBP9.28□□□□□ -0.92
ATG2B-205ENST00000553643 IRF7Q92985 503 aa9.28□□□□□ -0.92
ATG2B-205ENST00000553643 GJD4Q96KN9 370 aaPredicted RBP9.28□□□□□ -0.92
ATG2B-205ENST00000553643 Q6ZVU0 165 aa9.27□□□□□ -0.93
ATG2B-205ENST00000553643 TSEN34Q9BSV6 310 aaKnown RBP9.27□□□□□ -0.93
ATG2B-205ENST00000553643 PGPEP1Q9NXJ5 209 aa9.27□□□□□ -0.93
ATG2B-205ENST00000553643 DHX9Q08211 1270 aaKnown RBP9.26□□□□□ -0.93
ATG2B-205ENST00000553643 CBLBQ13191 982 aa9.26□□□□□ -0.93
ATG2B-205ENST00000553643 NBPF20Q3BBV1 942 aa9.26□□□□□ -0.93
ATG2B-205ENST00000553643 SOS2Q07890 1332 aaPredicted RBP9.26□□□□□ -0.93
ATG2B-205ENST00000553643 UNC13AQ9UPW8 1703 aa9.25□□□□□ -0.93
ATG2B-205ENST00000553643 MAN1A2O60476 641 aa9.25□□□□□ -0.93
ATG2B-205ENST00000553643 CECR2Q9BXF3 1484 aa9.24□□□□□ -0.93
ATG2B-205ENST00000553643 DNMT3LQ9UJW3 386 aa9.24□□□□□ -0.93
ATG2B-205ENST00000553643 ESPNB1AK53 854 aa9.23□□□□□ -0.93
ATG2B-205ENST00000553643 DZIP3Q86Y13 1208 aaKnown RBP9.23□□□□□ -0.93
ATG2B-205ENST00000553643 BICRAQ9NZM4 1560 aa9.22□□□□□ -0.93
ATG2B-205ENST00000553643 ZSCAN1Q8NBB4 408 aa9.22□□□□□ -0.93
ATG2B-205ENST00000553643 BANK1Q8NDB2 785 aa9.22□□□□□ -0.93
ATG2B-205ENST00000553643 ZBBXA8MT70 800 aa9.21□□□□□ -0.94
ATG2B-205ENST00000553643 SOCS7O14512 581 aa9.21□□□□□ -0.94
ATG2B-205ENST00000553643 SPINT1O43278 529 aa9.21□□□□□ -0.94
ATG2B-205ENST00000553643 TTLL8A6PVC2 850 aa9.2□□□□□ -0.94
ATG2B-205ENST00000553643 GPR37L1O60883 481 aa9.2□□□□□ -0.94
ATG2B-205ENST00000553643 FBXO45P0C2W1 286 aa9.2□□□□□ -0.94
ATG2B-205ENST00000553643 ZNF784Q8NCA9 323 aaPredicted RBP9.2□□□□□ -0.94
ATG2B-205ENST00000553643 MTMR14Q8NCE2 650 aa9.2□□□□□ -0.94
ATG2B-205ENST00000553643 TMPRSS4Q9NRS4 437 aa9.2□□□□□ -0.94
ATG2B-205ENST00000553643 ERVH48-1M5A8F1 160 aa9.19□□□□□ -0.94
ATG2B-205ENST00000553643 LILRA1O75019 489 aa9.19□□□□□ -0.94
ATG2B-205ENST00000553643 VSIG8P0DPA2 414 aa9.19□□□□□ -0.94
ATG2B-205ENST00000553643 AGBL1Q96MI9 1066 aa9.19□□□□□ -0.94
ATG2B-205ENST00000553643 CC2D2AQ9P2K1 1620 aa9.19□□□□□ -0.94
ATG2B-205ENST00000553643 RAB15P59190 212 aa9.18□□□□□ -0.94
ATG2B-205ENST00000553643 SEPT12Q8IYM1 358 aa9.18□□□□□ -0.94
ATG2B-205ENST00000553643 SHROOM4Q9ULL8 1493 aa9.17□□□□□ -0.94
ATG2B-205ENST00000553643 PPFIA3O75145 1194 aa9.17□□□□□ -0.94
ATG2B-205ENST00000553643 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.17□□□□□ -0.94
ATG2B-205ENST00000553643 RELBQ01201 579 aa9.16□□□□□ -0.94
ATG2B-205ENST00000553643 SNRKQ9NRH2 765 aa9.16□□□□□ -0.94
ATG2B-205ENST00000553643 PCDHB9Q9Y5E1 797 aa9.16□□□□□ -0.94
ATG2B-205ENST00000553643 ADH1AP07327 375 aa9.15□□□□□ -0.94
ATG2B-205ENST00000553643 ADD1P35611 737 aaKnown RBP9.15□□□□□ -0.94
ATG2B-205ENST00000553643 CTSOP43234 321 aaPredicted RBP9.15□□□□□ -0.94
ATG2B-205ENST00000553643 KDF1Q8NAX2 398 aaPredicted RBP9.15□□□□□ -0.94
ATG2B-205ENST00000553643 FAM181BA6NEQ2 426 aa9.14□□□□□ -0.95
ATG2B-205ENST00000553643 FIGNL2A6NMB9 653 aa9.14□□□□□ -0.95
ATG2B-205ENST00000553643 GIGYF1O75420 1035 aaPredicted RBP9.14□□□□□ -0.95
ATG2B-205ENST00000553643 NR1H3Q13133 447 aa9.14□□□□□ -0.95
ATG2B-205ENST00000553643 INSM2Q96T92 566 aaPredicted RBP9.14□□□□□ -0.95
ATG2B-205ENST00000553643 NDUFB9Q9Y6M9 179 aa9.14□□□□□ -0.95
ATG2B-205ENST00000553643 PTSQ03393 145 aa9.13□□□□□ -0.95
ATG2B-205ENST00000553643 ZNF395Q9H8N7 513 aaPredicted RBP9.13□□□□□ -0.95
ATG2B-205ENST00000553643 CYLDQ9NQC7 956 aa9.12□□□□□ -0.95
ATG2B-205ENST00000553643 APBB1O00213 710 aa9.11□□□□□ -0.95
ATG2B-205ENST00000553643 PTGIRP43119 386 aa9.11□□□□□ -0.95
ATG2B-205ENST00000553643 RNF217Q8TC41 542 aa9.11□□□□□ -0.95
ATG2B-205ENST00000553643 GPR161Q8N6U8 529 aaKnown RBP9.1□□□□□ -0.95
ATG2B-205ENST00000553643 POLMQ9NP87 494 aaPredicted RBP9.1□□□□□ -0.95
ATG2B-205ENST00000553643 MYO15BQ96JP2 1530 aa9.1□□□□□ -0.95
ATG2B-205ENST00000553643 MCCD1P59942 119 aaPredicted RBP9.09□□□□□ -0.95
ATG2B-205ENST00000553643 FOXD4L5Q5VV16 416 aaPredicted RBP9.09□□□□□ -0.95
ATG2B-205ENST00000553643 CCDC125Q86Z20 511 aa9.09□□□□□ -0.95
ATG2B-205ENST00000553643 CCDC155Q8N6L0 562 aa9.09□□□□□ -0.95
ATG2B-205ENST00000553643 SLC35F4A4IF30 521 aa9.08□□□□□ -0.96
ATG2B-205ENST00000553643 ERVK-9P63128 1117 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms