RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 EMILIN1Q9Y6C2 1016 aa20.25■□□□□ 0.83
MTHFD1-204ENST00000553405 COL5A2P05997 1499 aaPredicted RBP20.24■□□□□ 0.83
MTHFD1-204ENST00000553405 AFF2P51816 1311 aa20.24■□□□□ 0.83
MTHFD1-204ENST00000553405 TNNT2P45379 298 aaPredicted RBP20.23■□□□□ 0.83
MTHFD1-204ENST00000553405 MEX3CQ5U5Q3 659 aaKnown RBP20.23■□□□□ 0.83
MTHFD1-204ENST00000553405 IP6K1Q92551 441 aa20.23■□□□□ 0.83
MTHFD1-204ENST00000553405 NGLY1Q96IV0 654 aa20.23■□□□□ 0.83
MTHFD1-204ENST00000553405 BTG4Q9NY30 223 aa20.22■□□□□ 0.83
MTHFD1-204ENST00000553405 BLMP54132 1417 aaPredicted RBP20.21■□□□□ 0.83
MTHFD1-204ENST00000553405 HOXC9P31274 260 aa20.21■□□□□ 0.83
MTHFD1-204ENST00000553405 CDK12Q9NYV4 1490 aaPredicted RBP20.21■□□□□ 0.83
MTHFD1-204ENST00000553405 FLT4P35916 1363 aa20.21■□□□□ 0.83
MTHFD1-204ENST00000553405 ATRNO75882 1429 aa20.2■□□□□ 0.82
MTHFD1-204ENST00000553405 UNC5CLQ8IV45 518 aa20.19■□□□□ 0.82
MTHFD1-204ENST00000553405 PRKRIP1Q9H875 184 aaPredicted RBP20.19■□□□□ 0.82
MTHFD1-204ENST00000553405 INSRP06213 1382 aa20.19■□□□□ 0.82
MTHFD1-204ENST00000553405 COL3A1P02461 1466 aaPredicted RBP20.18■□□□□ 0.82
MTHFD1-204ENST00000553405 PPP2R1AP30153 589 aa20.18■□□□□ 0.82
MTHFD1-204ENST00000553405 CNGB1Q14028 1251 aaPredicted RBP20.18■□□□□ 0.82
MTHFD1-204ENST00000553405 HSP90AB2PQ58FF8 381 aa20.18■□□□□ 0.82
MTHFD1-204ENST00000553405 USP21Q9UK80 565 aa20.18■□□□□ 0.82
MTHFD1-204ENST00000553405 ERBB3P21860 1342 aa20.18■□□□□ 0.82
MTHFD1-204ENST00000553405 ZBTB7CA1YPR0 619 aa20.17■□□□□ 0.82
MTHFD1-204ENST00000553405 RALBP1Q15311 655 aa20.16■□□□□ 0.82
MTHFD1-204ENST00000553405 GLI3P10071 1580 aa20.16■□□□□ 0.82
MTHFD1-204ENST00000553405 AMPHP49418 695 aa20.15■□□□□ 0.82
MTHFD1-204ENST00000553405 MTHFSP49914 203 aa20.15■□□□□ 0.82
MTHFD1-204ENST00000553405 VPS72Q15906 364 aa20.15■□□□□ 0.82
MTHFD1-204ENST00000553405 WDR17Q8IZU2 1322 aa20.15■□□□□ 0.82
MTHFD1-204ENST00000553405 FAM208AQ9UK61 1670 aaKnown RBP20.14■□□□□ 0.81
MTHFD1-204ENST00000553405 LARP1Q6PKG0 1096 aaKnown RBP20.14■□□□□ 0.81
MTHFD1-204ENST00000553405 NCAPD2Q15021 1401 aa20.13■□□□□ 0.81
MTHFD1-204ENST00000553405 POTEAQ6S8J7 498 aa20.13■□□□□ 0.81
MTHFD1-204ENST00000553405 ANKRD24Q8TF21 1146 aa20.13■□□□□ 0.81
MTHFD1-204ENST00000553405 RGPD2P0DJD1 1756 aa20.13■□□□□ 0.81
MTHFD1-204ENST00000553405 SPATA31A5Q5VU36 1347 aa20.12■□□□□ 0.81
MTHFD1-204ENST00000553405 SPATA31A7Q8IWB4 1347 aa20.12■□□□□ 0.81
MTHFD1-204ENST00000553405 ZNF772Q68DY9 489 aaPredicted RBP20.12■□□□□ 0.81
MTHFD1-204ENST00000553405 RGPD1P0DJD0 1748 aa20.12■□□□□ 0.81
MTHFD1-204ENST00000553405 CRB1P82279 1406 aa20.11■□□□□ 0.81
MTHFD1-204ENST00000553405 SPATA31A1Q5TZJ5 1347 aa20.1■□□□□ 0.81
MTHFD1-204ENST00000553405 MYBBP1AQ9BQG0 1328 aaKnown RBP20.1■□□□□ 0.81
MTHFD1-204ENST00000553405 PPM1GO15355 546 aaPredicted RBP20.1■□□□□ 0.81
MTHFD1-204ENST00000553405 EIF4A2Q14240 407 aaKnown RBP20.1■□□□□ 0.81
MTHFD1-204ENST00000553405 QTRT2Q9H974 415 aaKnown RBP20.1■□□□□ 0.81
MTHFD1-204ENST00000553405 STRN4Q9NRL3 753 aa20.1■□□□□ 0.81
MTHFD1-204ENST00000553405 TRPC5Q9UL62 973 aaPredicted RBP20.1■□□□□ 0.81
MTHFD1-204ENST00000553405 IL13P35225 146 aa20.08■□□□□ 0.81
MTHFD1-204ENST00000553405 CARD10Q9BWT7 1032 aa20.08■□□□□ 0.81
MTHFD1-204ENST00000553405 WNK3Q9BYP7 1800 aa20.08■□□□□ 0.8
MTHFD1-204ENST00000553405 THSD7AQ9UPZ6 1657 aa20.07■□□□□ 0.8
MTHFD1-204ENST00000553405 NBPF6Q5VWK0 638 aa20.07■□□□□ 0.8
MTHFD1-204ENST00000553405 GJD4Q96KN9 370 aaPredicted RBP20.07■□□□□ 0.8
MTHFD1-204ENST00000553405 NBPF4Q96M43 638 aa20.07■□□□□ 0.8
MTHFD1-204ENST00000553405 PHF23Q9BUL5 403 aaPredicted RBP20.07■□□□□ 0.8
MTHFD1-204ENST00000553405 DISP2A7MBM2 1401 aa20.07■□□□□ 0.8
MTHFD1-204ENST00000553405 EVA1CP58658 441 aa20.06■□□□□ 0.8
MTHFD1-204ENST00000553405 LTV1Q96GA3 475 aaPredicted RBP20.06■□□□□ 0.8
MTHFD1-204ENST00000553405 ONECUT3O60422 494 aaPredicted RBP20.05■□□□□ 0.8
MTHFD1-204ENST00000553405 IGSF1Q8N6C5 1336 aa20.04■□□□□ 0.8
MTHFD1-204ENST00000553405 EYA1Q99502 592 aa20.04■□□□□ 0.8
MTHFD1-204ENST00000553405 RBM6P78332 1123 aaKnown RBP20.03■□□□□ 0.8
MTHFD1-204ENST00000553405 TOM1L2Q6ZVM7 507 aa20.03■□□□□ 0.8
MTHFD1-204ENST00000553405 CSB-PGBD3P0DP91 1061 aa20.02■□□□□ 0.8
MTHFD1-204ENST00000553405 BARGINQ6ZT62 677 aa20.02■□□□□ 0.8
MTHFD1-204ENST00000553405 NLRP2Q9NX02 1062 aa20.02■□□□□ 0.8
MTHFD1-204ENST00000553405 KDRP35968 1356 aa20.02■□□□□ 0.8
MTHFD1-204ENST00000553405 ANP32CO43423 234 aa20.01■□□□□ 0.79
MTHFD1-204ENST00000553405 DIAPH1O60610 1272 aaKnown RBP20.01■□□□□ 0.79
MTHFD1-204ENST00000553405 TCP11L2Q8N4U5 519 aa20.01■□□□□ 0.79
MTHFD1-204ENST00000553405 THRAP3Q9Y2W1 955 aaKnown RBP20.01■□□□□ 0.79
MTHFD1-204ENST00000553405 PARP4Q9UKK3 1724 aaKnown RBP20■□□□□ 0.79
MTHFD1-204ENST00000553405 CCDC184Q52MB2 194 aa20■□□□□ 0.79
MTHFD1-204ENST00000553405 DIEXFQ68CQ4 756 aaKnown RBP20■□□□□ 0.79
MTHFD1-204ENST00000553405 USHBP1Q8N6Y0 703 aa20■□□□□ 0.79
MTHFD1-204ENST00000553405 MEGF6O75095 1541 aa20■□□□□ 0.79
MTHFD1-204ENST00000553405 RGS12O14924 1447 aa20■□□□□ 0.79
MTHFD1-204ENST00000553405 USP35Q9P2H5 1018 aa19.99■□□□□ 0.79
MTHFD1-204ENST00000553405 LRRC37A3O60309 1634 aa19.98■□□□□ 0.79
MTHFD1-204ENST00000553405 RXRBP28702 533 aa19.98■□□□□ 0.79
MTHFD1-204ENST00000553405 FAM98CQ17RN3 349 aaKnown RBP19.98■□□□□ 0.79
MTHFD1-204ENST00000553405 AEBP1Q8IUX7 1158 aa19.98■□□□□ 0.79
MTHFD1-204ENST00000553405 CCDC9Q9Y3X0 531 aaKnown RBP19.98■□□□□ 0.79
MTHFD1-204ENST00000553405 CFAP53Q96M91 514 aa19.97■□□□□ 0.79
MTHFD1-204ENST00000553405 SHANK3Q9BYB0 1731 aa19.96■□□□□ 0.79
MTHFD1-204ENST00000553405 OVOS2A0A0G2JMS6 1433 aa19.96■□□□□ 0.79
MTHFD1-204ENST00000553405 BRWD3Q6RI45 1802 aa19.95■□□□□ 0.78
MTHFD1-204ENST00000553405 PKD1L3Q7Z443 1732 aa19.94■□□□□ 0.78
MTHFD1-204ENST00000553405 PLEKHG2Q9H7P9 1386 aa19.94■□□□□ 0.78
MTHFD1-204ENST00000553405 EP400Q96L91 3159 aa19.93■□□□□ 0.78
MTHFD1-204ENST00000553405 SEPT12Q8IYM1 358 aa19.93■□□□□ 0.78
MTHFD1-204ENST00000553405 IL2RBP14784 551 aa19.92■□□□□ 0.78
MTHFD1-204ENST00000553405 SULT6B1Q6IMI4 303 aa19.92■□□□□ 0.78
MTHFD1-204ENST00000553405 CDCA7Q9BWT1 371 aaPredicted RBP19.92■□□□□ 0.78
MTHFD1-204ENST00000553405 TNS2Q63HR2 1409 aa19.92■□□□□ 0.78
MTHFD1-204ENST00000553405 RSPH6AQ9H0K4 717 aa19.9■□□□□ 0.78
MTHFD1-204ENST00000553405 HMOX1P09601 288 aa19.89■□□□□ 0.77
MTHFD1-204ENST00000553405 U2SURPO15042 1029 aaKnown RBP19.88■□□□□ 0.77
MTHFD1-204ENST00000553405 MIER1Q8N108 512 aa19.88■□□□□ 0.77
MTHFD1-204ENST00000553405 NUDCQ9Y266 331 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms