RNA–Protein interactions for RNA: ENST00000553361.5

XRCC3-204, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-204ENST00000553361 NME9Q86XW9 330 aa23.38■■□□□ 1.33
XRCC3-204ENST00000553361 RGPD1P0DJD0 1748 aa23.36■■□□□ 1.33
XRCC3-204ENST00000553361 ST20-MTHFSA0A0A6YYL1 179 aa23.34■■□□□ 1.33
XRCC3-204ENST00000553361 CARD10Q9BWT7 1032 aa23.34■■□□□ 1.33
XRCC3-204ENST00000553361 TERF2IPQ9NYB0 399 aa23.34■■□□□ 1.33
XRCC3-204ENST00000553361 C11orf95C9JLR9 678 aaPredicted RBP23.33■■□□□ 1.33
XRCC3-204ENST00000553361 CD163L1Q9NR16 1453 aa23.31■■□□□ 1.32
XRCC3-204ENST00000553361 USP31Q70CQ4 1352 aa23.31■■□□□ 1.32
XRCC3-204ENST00000553361 PARD3Q8TEW0 1356 aa23.31■■□□□ 1.32
XRCC3-204ENST00000553361 PUS7Q96PZ0 661 aaKnown RBP23.31■■□□□ 1.32
XRCC3-204ENST00000553361 TESK2Q96S53 571 aa23.31■■□□□ 1.32
XRCC3-204ENST00000553361 CDCA7Q9BWT1 371 aaPredicted RBP23.31■■□□□ 1.32
XRCC3-204ENST00000553361 MARCH10Q8NA82 808 aaPredicted RBP23.3■■□□□ 1.32
XRCC3-204ENST00000553361 TNS1Q9HBL0 1735 aaKnown RBP23.3■■□□□ 1.32
XRCC3-204ENST00000553361 OVOS2A0A0G2JMS6 1433 aa23.29■■□□□ 1.32
XRCC3-204ENST00000553361 OVOS2A0A0J9YW53 1432 aa23.29■■□□□ 1.32
XRCC3-204ENST00000553361 NBPF14Q5TI25 921 aa23.29■■□□□ 1.32
XRCC3-204ENST00000553361 OVOS2Q6IE36 1432 aa23.29■■□□□ 1.32
XRCC3-204ENST00000553361 AKAP12Q02952 1782 aa23.29■■□□□ 1.32
XRCC3-204ENST00000553361 COL18A1P39060 1754 aa23.28■■□□□ 1.32
XRCC3-204ENST00000553361 EXOC5O00471 708 aa23.28■■□□□ 1.32
XRCC3-204ENST00000553361 NFAT5O94916 1531 aa23.28■■□□□ 1.32
XRCC3-204ENST00000553361 A0A1W2PP64 1363 aa23.27■■□□□ 1.32
XRCC3-204ENST00000553361 PTF1AQ7RTS3 328 aa23.27■■□□□ 1.32
XRCC3-204ENST00000553361 NLRP2Q9NX02 1062 aa23.27■■□□□ 1.32
XRCC3-204ENST00000553361 BCL11BQ9C0K0 894 aaPredicted RBP23.26■■□□□ 1.31
XRCC3-204ENST00000553361 EDC4Q6P2E9 1401 aaKnown RBP23.25■■□□□ 1.31
XRCC3-204ENST00000553361 SLC24A1O60721 1099 aa23.25■■□□□ 1.31
XRCC3-204ENST00000553361 PARP4Q9UKK3 1724 aaKnown RBP23.25■■□□□ 1.31
XRCC3-204ENST00000553361 CCDC7Q96M83 1385 aa23.24■■□□□ 1.31
XRCC3-204ENST00000553361 ANKRD24Q8TF21 1146 aa23.23■■□□□ 1.31
XRCC3-204ENST00000553361 ERBB3P21860 1342 aa23.23■■□□□ 1.31
XRCC3-204ENST00000553361 PLSCR1O15162 318 aa23.22■■□□□ 1.31
XRCC3-204ENST00000553361 MON2Q7Z3U7 1717 aa23.21■■□□□ 1.31
XRCC3-204ENST00000553361 LRRC37A3O60309 1634 aa23.19■■□□□ 1.3
XRCC3-204ENST00000553361 LTV1Q96GA3 475 aaPredicted RBP23.19■■□□□ 1.3
XRCC3-204ENST00000553361 COG3Q96JB2 828 aa23.19■■□□□ 1.3
XRCC3-204ENST00000553361 NINLQ9Y2I6 1382 aa23.18■■□□□ 1.3
XRCC3-204ENST00000553361 IL2RBP14784 551 aa23.18■■□□□ 1.3
XRCC3-204ENST00000553361 FBLN1P23142 703 aa23.18■■□□□ 1.3
XRCC3-204ENST00000553361 TMF1P82094 1093 aa23.18■■□□□ 1.3
XRCC3-204ENST00000553361 LRP5O75197 1615 aa23.18■■□□□ 1.3
XRCC3-204ENST00000553361 IP6K1Q92551 441 aa23.17■■□□□ 1.3
XRCC3-204ENST00000553361 USP47Q96K76 1375 aa23.16■■□□□ 1.3
XRCC3-204ENST00000553361 KCNQ2O43526 872 aa23.16■■□□□ 1.3
XRCC3-204ENST00000553361 PROM2Q8N271 834 aa23.16■■□□□ 1.3
XRCC3-204ENST00000553361 ACSBG1Q96GR2 724 aa23.16■■□□□ 1.3
XRCC3-204ENST00000553361 PCGF6Q9BYE7 350 aa23.16■■□□□ 1.3
XRCC3-204ENST00000553361 RGPD5Q99666 1765 aa23.16■■□□□ 1.3
XRCC3-204ENST00000553361 PEAK1Q9H792 1746 aa23.16■■□□□ 1.3
XRCC3-204ENST00000553361 ABCC6O95255 1503 aa23.15■■□□□ 1.3
XRCC3-204ENST00000553361 BCL9O00512 1426 aa23.15■■□□□ 1.3
XRCC3-204ENST00000553361 AMPHP49418 695 aa23.14■■□□□ 1.29
XRCC3-204ENST00000553361 ANO8Q9HCE9 1232 aaPredicted RBP23.13■■□□□ 1.29
XRCC3-204ENST00000553361 MAP3K19Q56UN5 1328 aa23.12■■□□□ 1.29
XRCC3-204ENST00000553361 TNS2Q63HR2 1409 aa23.12■■□□□ 1.29
XRCC3-204ENST00000553361 ANKRD36BQ8N2N9 1353 aa23.12■■□□□ 1.29
XRCC3-204ENST00000553361 TXNRD1Q16881 649 aa23.11■■□□□ 1.29
XRCC3-204ENST00000553361 SPON1Q9HCB6 807 aa23.11■■□□□ 1.29
XRCC3-204ENST00000553361 RREB1Q92766 1687 aa23.1■■□□□ 1.29
XRCC3-204ENST00000553361 GGNBP2Q9H3C7 697 aa23.1■■□□□ 1.29
XRCC3-204ENST00000553361 NUP188Q5SRE5 1749 aa23.09■■□□□ 1.29
XRCC3-204ENST00000553361 FYB1O15117 783 aa23.09■■□□□ 1.29
XRCC3-204ENST00000553361 HOXC9P31274 260 aa23.09■■□□□ 1.29
XRCC3-204ENST00000553361 CDCA8Q53HL2 280 aa23.09■■□□□ 1.29
XRCC3-204ENST00000553361 DDX54Q8TDD1 881 aaKnown RBP23.09■■□□□ 1.29
XRCC3-204ENST00000553361 RRS1Q15050 365 aaKnown RBP23.08■■□□□ 1.29
XRCC3-204ENST00000553361 PPP1R1BQ9UD71 204 aaPredicted RBP23.08■■□□□ 1.29
XRCC3-204ENST00000553361 USP54Q70EL1 1684 aa23.08■■□□□ 1.29
XRCC3-204ENST00000553361 PDGFDQ9GZP0 370 aaPredicted RBP23.06■■□□□ 1.28
XRCC3-204ENST00000553361 STK32BQ9NY57 414 aa23.06■■□□□ 1.28
XRCC3-204ENST00000553361 TIMELESSQ9UNS1 1208 aa23.06■■□□□ 1.28
XRCC3-204ENST00000553361 WNK3Q9BYP7 1800 aa23.05■■□□□ 1.28
XRCC3-204ENST00000553361 SBF2Q86WG5 1849 aa23.04■■□□□ 1.28
XRCC3-204ENST00000553361 LTN1O94822 1766 aa23.04■■□□□ 1.28
XRCC3-204ENST00000553361 ZBTB7AO95365 584 aa23.02■■□□□ 1.28
XRCC3-204ENST00000553361 SLC15A2Q16348 729 aa23.02■■□□□ 1.28
XRCC3-204ENST00000553361 NBPF6Q5VWK0 638 aa23■■□□□ 1.27
XRCC3-204ENST00000553361 ZCRB1Q8TBF4 217 aaKnown RBP23■■□□□ 1.27
XRCC3-204ENST00000553361 NBPF4Q96M43 638 aa23■■□□□ 1.27
XRCC3-204ENST00000553361 CARD14Q9BXL6 1004 aa23■■□□□ 1.27
XRCC3-204ENST00000553361 USHBP1Q8N6Y0 703 aa22.99■■□□□ 1.27
XRCC3-204ENST00000553361 SYTL4Q96C24 671 aaPredicted RBP22.99■■□□□ 1.27
XRCC3-204ENST00000553361 ATF5Q9Y2D1 282 aaPredicted RBP22.99■■□□□ 1.27
XRCC3-204ENST00000553361 CLSPNQ9HAW4 1339 aa22.99■■□□□ 1.27
XRCC3-204ENST00000553361 POLR3GLQ9BT43 218 aa22.98■■□□□ 1.27
XRCC3-204ENST00000553361 PRIM1P49642 420 aaKnown RBP22.97■■□□□ 1.27
XRCC3-204ENST00000553361 HSP90AB2PQ58FF8 381 aa22.97■■□□□ 1.27
XRCC3-204ENST00000553361 RGPD3A6NKT7 1758 aaPredicted RBP22.96■■□□□ 1.27
XRCC3-204ENST00000553361 RGPD4Q7Z3J3 1758 aa22.96■■□□□ 1.27
XRCC3-204ENST00000553361 RTL1A6NKG5 1358 aa22.96■■□□□ 1.27
XRCC3-204ENST00000553361 LRRC4BQ9NT99 713 aa22.94■■□□□ 1.26
XRCC3-204ENST00000553361 RAPGEF4Q8WZA2 1011 aa22.93■■□□□ 1.26
XRCC3-204ENST00000553361 NSD3Q9BZ95 1437 aa22.92■■□□□ 1.26
XRCC3-204ENST00000553361 PPM1GO15355 546 aaPredicted RBP22.92■■□□□ 1.26
XRCC3-204ENST00000553361 SMG6Q86US8 1419 aaKnown RBP22.91■■□□□ 1.26
XRCC3-204ENST00000553361 NHSQ6T4R5 1651 aa22.91■■□□□ 1.26
XRCC3-204ENST00000553361 TATP17735 454 aaPredicted RBP22.91■■□□□ 1.26
XRCC3-204ENST00000553361 PTGER2P43116 358 aa22.91■■□□□ 1.26
XRCC3-204ENST00000553361 ZNF827Q17R98 1081 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms