RNA–Protein interactions for RNA: ENST00000553055.1

PFKM-231, Transcript of phosphofructokinase, muscle, human

TSL 5

Gene PFKM, Length 289 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-231	ENST00000553055	BAZ1B	Q9UIG0	1483 aa	Known RBP	10.24	□□□□□ -0.77
PFKM-231	ENST00000553055	PPP1R3G	B7ZBB8	358 aa		10.24	□□□□□ -0.77
PFKM-231	ENST00000553055	SF3B2	Q13435	895 aa	Known RBP	10.24	□□□□□ -0.77
PFKM-231	ENST00000553055	TAS1R3	Q7RTX0	852 aa		10.24	□□□□□ -0.77
PFKM-231	ENST00000553055	NT5DC4	Q86YG4	428 aa		10.24	□□□□□ -0.77
PFKM-231	ENST00000553055	TINF2	Q9BSI4	451 aa		10.24	□□□□□ -0.77
PFKM-231	ENST00000553055	METTL14	Q9HCE5	456 aa	Known RBP	10.24	□□□□□ -0.77
PFKM-231	ENST00000553055	ANO2	Q9NQ90	1003 aa		10.24	□□□□□ -0.77
PFKM-231	ENST00000553055	CXXC1	Q9P0U4	656 aa	Predicted RBP	10.24	□□□□□ -0.77
PFKM-231	ENST00000553055	RBM19	Q9Y4C8	960 aa	Known RBP	10.24	□□□□□ -0.77
PFKM-231	ENST00000553055	GTF2F1	P35269	517 aa	Known RBP eCLIP	10.23	□□□□□ -0.77
PFKM-231	ENST00000553055	RAD51AP2	Q09MP3	1159 aa		10.23	□□□□□ -0.77
PFKM-231	ENST00000553055	EML3	Q32P44	896 aa		10.23	□□□□□ -0.77
PFKM-231	ENST00000553055	OGFOD1	Q8N543	542 aa		10.23	□□□□□ -0.77
PFKM-231	ENST00000553055	TGIF2	Q9GZN2	237 aa		10.23	□□□□□ -0.77
PFKM-231	ENST00000553055	FAM198A	Q9UFP1	575 aa		10.23	□□□□□ -0.77
PFKM-231	ENST00000553055	PLEKHD1	A6NEE1	506 aa		10.22	□□□□□ -0.77
PFKM-231	ENST00000553055	PRMT3	O60678	531 aa		10.22	□□□□□ -0.77
PFKM-231	ENST00000553055	SDE2	Q6IQ49	451 aa		10.22	□□□□□ -0.77
PFKM-231	ENST00000553055	TMEM87A	Q8NBN3	555 aa		10.22	□□□□□ -0.77
PFKM-231	ENST00000553055	MRS2	Q9HD23	443 aa		10.22	□□□□□ -0.77
PFKM-231	ENST00000553055	METTL5	Q9NRN9	209 aa	Known RBP	10.22	□□□□□ -0.77
PFKM-231	ENST00000553055	PNMA3	Q9UL41	463 aa		10.22	□□□□□ -0.77
PFKM-231	ENST00000553055	SBNO2	Q9Y2G9	1366 aa		10.22	□□□□□ -0.77
PFKM-231	ENST00000553055	RAB11FIP3	O75154	756 aa		10.21	□□□□□ -0.77
PFKM-231	ENST00000553055	XPC	Q01831	940 aa	Predicted RBP	10.21	□□□□□ -0.77
PFKM-231	ENST00000553055	CCDC144B	Q3MJ40	725 aa		10.21	□□□□□ -0.77
PFKM-231	ENST00000553055	DHX38	Q92620	1227 aa	Known RBP	10.21	□□□□□ -0.77
PFKM-231	ENST00000553055	HLA-C	Q95604	372 aa		10.21	□□□□□ -0.77
PFKM-231	ENST00000553055	ZNF594	Q96JF6	807 aa	Predicted RBP	10.21	□□□□□ -0.77
PFKM-231	ENST00000553055	ADAM33	Q9BZ11	813 aa		10.21	□□□□□ -0.77
PFKM-231	ENST00000553055	CAPN10	Q9HC96	672 aa		10.21	□□□□□ -0.77
PFKM-231	ENST00000553055	hCG_2014768	A0A024R1R8	64 aa		10.2	□□□□□ -0.78
PFKM-231	ENST00000553055	IBSP	P21815	317 aa	Predicted RBP	10.2	□□□□□ -0.78
PFKM-231	ENST00000553055	IGBP1	P78318	339 aa		10.2	□□□□□ -0.78
PFKM-231	ENST00000553055	FKBP4	Q02790	459 aa	Known RBP eCLIP	10.2	□□□□□ -0.78
PFKM-231	ENST00000553055	SOGA3	Q5TF21	947 aa		10.2	□□□□□ -0.78
PFKM-231	ENST00000553055	PLPP7	Q8NBV4	271 aa		10.2	□□□□□ -0.78
PFKM-231	ENST00000553055	TATDN2	Q93075	761 aa		10.2	□□□□□ -0.78
PFKM-231	ENST00000553055	DNAAF2	Q9NVR5	837 aa	Known RBP	10.2	□□□□□ -0.78
PFKM-231	ENST00000553055	MCCD1	P59942	119 aa	Predicted RBP	10.19	□□□□□ -0.78
PFKM-231	ENST00000553055	MAP7D1	Q3KQU3	841 aa		10.19	□□□□□ -0.78
PFKM-231	ENST00000553055	LARGE2	Q8N3Y3	721 aa		10.19	□□□□□ -0.78
PFKM-231	ENST00000553055	RNF34	Q969K3	372 aa		10.19	□□□□□ -0.78
PFKM-231	ENST00000553055	PPME1	Q9Y570	386 aa		10.19	□□□□□ -0.78
PFKM-231	ENST00000553055	PER1	O15534	1290 aa	Predicted RBP	10.18	□□□□□ -0.78
PFKM-231	ENST00000553055	CLSTN1	O94985	981 aa		10.18	□□□□□ -0.78
PFKM-231	ENST00000553055	P4HB	P07237	508 aa	Known RBP	10.18	□□□□□ -0.78
PFKM-231	ENST00000553055	CCDC181	Q5TID7	509 aa		10.18	□□□□□ -0.78
PFKM-231	ENST00000553055	EGFLAM	Q63HQ2	1017 aa		10.18	□□□□□ -0.78
PFKM-231	ENST00000553055	PACS2	Q86VP3	889 aa		10.18	□□□□□ -0.78
PFKM-231	ENST00000553055	PIP4P2	Q8N4L2	257 aa		10.18	□□□□□ -0.78
PFKM-231	ENST00000553055	GTF3C2	Q8WUA4	911 aa	Predicted RBP	10.18	□□□□□ -0.78
PFKM-231	ENST00000553055	TSKS	Q9UJT2	592 aa		10.18	□□□□□ -0.78
PFKM-231	ENST00000553055	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	10.18	□□□□□ -0.78
PFKM-231	ENST00000553055	RSF1	Q96T23	1441 aa	Predicted RBP	10.17	□□□□□ -0.78
PFKM-231	ENST00000553055	FMNL1	O95466	1100 aa	Predicted RBP	10.17	□□□□□ -0.78
PFKM-231	ENST00000553055	ATN1	P54259	1190 aa	Predicted RBP	10.17	□□□□□ -0.78
PFKM-231	ENST00000553055	ARHGAP4	P98171	946 aa		10.17	□□□□□ -0.78
PFKM-231	ENST00000553055	OCLN	Q16625	522 aa		10.17	□□□□□ -0.78
PFKM-231	ENST00000553055	PTPRO	Q16827	1216 aa		10.17	□□□□□ -0.78
PFKM-231	ENST00000553055	METTL16	Q86W50	562 aa	Known RBP	10.17	□□□□□ -0.78
PFKM-231	ENST00000553055	UBE2Q2	Q8WVN8	375 aa		10.17	□□□□□ -0.78
PFKM-231	ENST00000553055	MYH16	Q9H6N6	1097 aa		10.17	□□□□□ -0.78
PFKM-231	ENST00000553055	NOD1	Q9Y239	953 aa		10.17	□□□□□ -0.78
PFKM-231	ENST00000553055	KDM4F	A0A1W2PPD8	638 aa		10.16	□□□□□ -0.78
PFKM-231	ENST00000553055	SEC13	P55735	322 aa		10.16	□□□□□ -0.78
PFKM-231	ENST00000553055	DESI1	Q6ICB0	168 aa		10.16	□□□□□ -0.78
PFKM-231	ENST00000553055	C3orf67	Q6ZVT6	689 aa		10.16	□□□□□ -0.78
PFKM-231	ENST00000553055	FKBPL	Q9UIM3	349 aa		10.16	□□□□□ -0.78
PFKM-231	ENST00000553055	TBX22	Q9Y458	520 aa		10.16	□□□□□ -0.78
PFKM-231	ENST00000553055	CEP164	Q9UPV0	1460 aa		10.16	□□□□□ -0.78
PFKM-231	ENST00000553055	SIX5	Q8N196	739 aa		10.15	□□□□□ -0.78
PFKM-231	ENST00000553055	ZCRB1	Q8TBF4	217 aa	Known RBP	10.15	□□□□□ -0.78
PFKM-231	ENST00000553055	PRIMPOL	Q96LW4	560 aa		10.15	□□□□□ -0.78
PFKM-231	ENST00000553055	CEP126	Q9P2H0	1117 aa		10.15	□□□□□ -0.78
PFKM-231	ENST00000553055	RIPOR2	Q9Y4F9	1068 aa		10.15	□□□□□ -0.78
PFKM-231	ENST00000553055	SMARCA4	P51532	1647 aa		10.15	□□□□□ -0.79
PFKM-231	ENST00000553055	ANAPC15	P60006	121 aa		10.14	□□□□□ -0.79
PFKM-231	ENST00000553055	CLDN10	P78369	228 aa		10.14	□□□□□ -0.79
PFKM-231	ENST00000553055	PMFBP1	Q8TBY8	1022 aa		10.14	□□□□□ -0.79
PFKM-231	ENST00000553055	KCNB2	Q92953	911 aa		10.14	□□□□□ -0.79
PFKM-231	ENST00000553055	ZSWIM4	Q9H7M6	989 aa		10.14	□□□□□ -0.79
PFKM-231	ENST00000553055	SORBS3	O60504	671 aa		10.13	□□□□□ -0.79
PFKM-231	ENST00000553055	DNAJA1	P31689	397 aa	Known RBP	10.13	□□□□□ -0.79
PFKM-231	ENST00000553055	KCNH2	Q12809	1159 aa		10.13	□□□□□ -0.79
PFKM-231	ENST00000553055	RETREG3	Q86VR2	466 aa		10.13	□□□□□ -0.79
PFKM-231	ENST00000553055	GML	Q99445	158 aa		10.13	□□□□□ -0.79
PFKM-231	ENST00000553055	RBCK1	Q9BYM8	510 aa		10.13	□□□□□ -0.79
PFKM-231	ENST00000553055	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	10.13	□□□□□ -0.79
PFKM-231	ENST00000553055	PTCD1	O75127	700 aa	Known RBP	10.12	□□□□□ -0.79
PFKM-231	ENST00000553055	ZNF76	P36508	570 aa		10.12	□□□□□ -0.79
PFKM-231	ENST00000553055	SLC4A3	P48751	1232 aa		10.12	□□□□□ -0.79
PFKM-231	ENST00000553055	FANCC	Q00597	558 aa		10.12	□□□□□ -0.79
PFKM-231	ENST00000553055	ECM1	Q16610	540 aa		10.12	□□□□□ -0.79
PFKM-231	ENST00000553055	LDLRAD1	Q5T700	205 aa		10.12	□□□□□ -0.79
PFKM-231	ENST00000553055	GORAB	Q5T7V8	394 aa		10.12	□□□□□ -0.79
PFKM-231	ENST00000553055	SPACA7	Q96KW9	195 aa		10.12	□□□□□ -0.79
PFKM-231	ENST00000553055	BRINP2	Q9C0B6	783 aa		10.12	□□□□□ -0.79
PFKM-231	ENST00000553055	VTI1B	Q9UEU0	232 aa		10.12	□□□□□ -0.79

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