RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 ABTB2Q8N961 1025 aa16.83■□□□□ 0.28
SUPT16H-202ENST00000552829 CDK19Q9BWU1 502 aa16.83■□□□□ 0.28
SUPT16H-202ENST00000552829 FHDC1Q9C0D6 1143 aaPredicted RBP16.82■□□□□ 0.28
SUPT16H-202ENST00000552829 ATF5Q9Y2D1 282 aaPredicted RBP16.82■□□□□ 0.28
SUPT16H-202ENST00000552829 CCDC61Q9Y6R9 512 aa16.82■□□□□ 0.28
SUPT16H-202ENST00000552829 COL18A1P39060 1754 aa16.8■□□□□ 0.28
SUPT16H-202ENST00000552829 DDB1Q16531 1140 aa16.8■□□□□ 0.28
SUPT16H-202ENST00000552829 NLRP13Q86W25 1043 aa16.8■□□□□ 0.28
SUPT16H-202ENST00000552829 MARCH10Q8NA82 808 aaPredicted RBP16.8■□□□□ 0.28
SUPT16H-202ENST00000552829 WNK3Q9BYP7 1800 aa16.8■□□□□ 0.28
SUPT16H-202ENST00000552829 AATKQ6ZMQ8 1374 aa16.79■□□□□ 0.28
SUPT16H-202ENST00000552829 SLC15A2Q16348 729 aa16.79■□□□□ 0.28
SUPT16H-202ENST00000552829 STAC3Q96MF2 364 aa16.79■□□□□ 0.28
SUPT16H-202ENST00000552829 CEP350Q5VT06 3117 aa16.78■□□□□ 0.28
SUPT16H-202ENST00000552829 MTFR1LQ9H019 292 aa16.78■□□□□ 0.28
SUPT16H-202ENST00000552829 MAP3K5Q99683 1374 aa16.77■□□□□ 0.28
SUPT16H-202ENST00000552829 AKAP12Q02952 1782 aa16.77■□□□□ 0.28
SUPT16H-202ENST00000552829 TXNRD1Q16881 649 aa16.77■□□□□ 0.28
SUPT16H-202ENST00000552829 DCAF11Q8TEB1 546 aa16.77■□□□□ 0.28
SUPT16H-202ENST00000552829 STK32BQ9NY57 414 aa16.77■□□□□ 0.28
SUPT16H-202ENST00000552829 KDM2AQ9Y2K7 1162 aa16.77■□□□□ 0.28
SUPT16H-202ENST00000552829 BRD4O60885 1362 aaPredicted RBP16.76■□□□□ 0.27
SUPT16H-202ENST00000552829 SLIT3O75094 1523 aa16.75■□□□□ 0.27
SUPT16H-202ENST00000552829 CDCA7Q9BWT1 371 aaPredicted RBP16.74■□□□□ 0.27
SUPT16H-202ENST00000552829 WDR17Q8IZU2 1322 aa16.72■□□□□ 0.27
SUPT16H-202ENST00000552829 TOM1L2Q6ZVM7 507 aa16.72■□□□□ 0.27
SUPT16H-202ENST00000552829 ARXQ96QS3 562 aa16.72■□□□□ 0.27
SUPT16H-202ENST00000552829 AXIN2Q9Y2T1 843 aa16.72■□□□□ 0.27
SUPT16H-202ENST00000552829 PAPPAQ13219 1627 aa16.71■□□□□ 0.27
SUPT16H-202ENST00000552829 RGPD5Q99666 1765 aa16.71■□□□□ 0.27
SUPT16H-202ENST00000552829 PPIP5K1Q6PFW1 1433 aa16.7■□□□□ 0.26
SUPT16H-202ENST00000552829 NLRP6P59044 892 aa16.69■□□□□ 0.26
SUPT16H-202ENST00000552829 CARD10Q9BWT7 1032 aa16.69■□□□□ 0.26
SUPT16H-202ENST00000552829 COL24A1Q17RW2 1714 aa16.69■□□□□ 0.26
SUPT16H-202ENST00000552829 USP6P35125 1406 aa16.68■□□□□ 0.26
SUPT16H-202ENST00000552829 NHSQ6T4R5 1651 aa16.68■□□□□ 0.26
SUPT16H-202ENST00000552829 KIAA1210Q9ULL0 1709 aa16.67■□□□□ 0.26
SUPT16H-202ENST00000552829 ZBTB7CA1YPR0 619 aa16.67■□□□□ 0.26
SUPT16H-202ENST00000552829 GIGYF1O75420 1035 aaPredicted RBP16.67■□□□□ 0.26
SUPT16H-202ENST00000552829 ARHGEF25Q86VW2 580 aa16.67■□□□□ 0.26
SUPT16H-202ENST00000552829 PIK3C2AO00443 1686 aa16.66■□□□□ 0.26
SUPT16H-202ENST00000552829 SHANK3Q9BYB0 1731 aa16.66■□□□□ 0.26
SUPT16H-202ENST00000552829 CPSF1Q10570 1443 aaKnown RBP16.65■□□□□ 0.26
SUPT16H-202ENST00000552829 EXOC5O00471 708 aa16.65■□□□□ 0.26
SUPT16H-202ENST00000552829 GPR162Q16538 588 aa16.65■□□□□ 0.26
SUPT16H-202ENST00000552829 KAT6BQ8WYB5 2073 aa16.65■□□□□ 0.26
SUPT16H-202ENST00000552829 GOLGB1Q14789 3259 aaKnown RBP16.64■□□□□ 0.25
SUPT16H-202ENST00000552829 TRPM1Q7Z4N2 1603 aa16.64■□□□□ 0.25
SUPT16H-202ENST00000552829 QSER1Q2KHR3 1735 aa16.64■□□□□ 0.25
SUPT16H-202ENST00000552829 TNS2Q63HR2 1409 aa16.63■□□□□ 0.25
SUPT16H-202ENST00000552829 SRPK2P78362 688 aaKnown RBP16.63■□□□□ 0.25
SUPT16H-202ENST00000552829 ZNF827Q17R98 1081 aa16.63■□□□□ 0.25
SUPT16H-202ENST00000552829 CNKSR2Q8WXI2 1034 aa16.63■□□□□ 0.25
SUPT16H-202ENST00000552829 CABP2Q9NPB3 220 aa16.63■□□□□ 0.25
SUPT16H-202ENST00000552829 BTAF1O14981 1849 aa16.63■□□□□ 0.25
SUPT16H-202ENST00000552829 RAB3GAP2Q9H2M9 1393 aa16.63■□□□□ 0.25
SUPT16H-202ENST00000552829 CABP1Q9NZU7 370 aa16.62■□□□□ 0.25
SUPT16H-202ENST00000552829 CCDC7Q96M83 1385 aa16.62■□□□□ 0.25
SUPT16H-202ENST00000552829 NBPF1Q3BBV0 1214 aa16.61■□□□□ 0.25
SUPT16H-202ENST00000552829 SLC16A10Q8TF71 515 aa16.61■□□□□ 0.25
SUPT16H-202ENST00000552829 LRRC4BQ9NT99 713 aa16.61■□□□□ 0.25
SUPT16H-202ENST00000552829 AKT1S1Q96B36 256 aa16.6■□□□□ 0.25
SUPT16H-202ENST00000552829 ABCC6O95255 1503 aa16.6■□□□□ 0.25
SUPT16H-202ENST00000552829 QRICH2Q9H0J4 1663 aa16.59■□□□□ 0.25
SUPT16H-202ENST00000552829 CENPJQ9HC77 1338 aaPredicted RBP16.59■□□□□ 0.25
SUPT16H-202ENST00000552829 NFAT5O94916 1531 aa16.59■□□□□ 0.25
SUPT16H-202ENST00000552829 KCNH5Q8NCM2 988 aa16.58■□□□□ 0.24
SUPT16H-202ENST00000552829 ACSBG1Q96GR2 724 aa16.58■□□□□ 0.24
SUPT16H-202ENST00000552829 CSB-PGBD3P0DP91 1061 aa16.57■□□□□ 0.24
SUPT16H-202ENST00000552829 TUBGCP6Q96RT7 1819 aa16.56■□□□□ 0.24
SUPT16H-202ENST00000552829 TTC21BQ7Z4L5 1316 aa16.56■□□□□ 0.24
SUPT16H-202ENST00000552829 PNPLA7Q6ZV29 1317 aa16.55■□□□□ 0.24
SUPT16H-202ENST00000552829 NLGN2Q8NFZ4 835 aa16.55■□□□□ 0.24
SUPT16H-202ENST00000552829 YBX3P16989 372 aaKnown RBP eCLIP16.54■□□□□ 0.24
SUPT16H-202ENST00000552829 POLD1P28340 1107 aa16.54■□□□□ 0.24
SUPT16H-202ENST00000552829 TTC21AQ8NDW8 1320 aa16.53■□□□□ 0.24
SUPT16H-202ENST00000552829 ZNF692Q9BU19 519 aaPredicted RBP16.53■□□□□ 0.24
SUPT16H-202ENST00000552829 GRIN3BO60391 1043 aa16.52■□□□□ 0.24
SUPT16H-202ENST00000552829 SLC27A3Q5K4L6 730 aa16.52■□□□□ 0.24
SUPT16H-202ENST00000552829 PELP1Q8IZL8 1130 aaKnown RBP16.52■□□□□ 0.24
SUPT16H-202ENST00000552829 IL2RBP14784 551 aa16.51■□□□□ 0.23
SUPT16H-202ENST00000552829 ERBB3P21860 1342 aa16.5■□□□□ 0.23
SUPT16H-202ENST00000552829 SOX12O15370 315 aa16.5■□□□□ 0.23
SUPT16H-202ENST00000552829 KLHL34Q8N239 644 aa16.5■□□□□ 0.23
SUPT16H-202ENST00000552829 ATP10DQ9P241 1426 aa16.5■□□□□ 0.23
SUPT16H-202ENST00000552829 USP54Q70EL1 1684 aa16.49■□□□□ 0.23
SUPT16H-202ENST00000552829 LY75O60449 1722 aa16.48■□□□□ 0.23
SUPT16H-202ENST00000552829 HSPA6P17066 643 aa16.48■□□□□ 0.23
SUPT16H-202ENST00000552829 NLRP2Q9NX02 1062 aa16.48■□□□□ 0.23
SUPT16H-202ENST00000552829 USP31Q70CQ4 1352 aa16.48■□□□□ 0.23
SUPT16H-202ENST00000552829 EVC2Q86UK5 1308 aa16.47■□□□□ 0.23
SUPT16H-202ENST00000552829 ZBTB22O15209 634 aa16.47■□□□□ 0.23
SUPT16H-202ENST00000552829 TFCP2L1Q9NZI6 479 aa16.47■□□□□ 0.23
SUPT16H-202ENST00000552829 ADCY9O60503 1353 aa16.47■□□□□ 0.23
SUPT16H-202ENST00000552829 LTN1O94822 1766 aa16.46■□□□□ 0.22
SUPT16H-202ENST00000552829 KCNQ4P56696 695 aa16.45■□□□□ 0.22
SUPT16H-202ENST00000552829 MON2Q7Z3U7 1717 aa16.45■□□□□ 0.22
SUPT16H-202ENST00000552829 NSD2O96028 1365 aa16.43■□□□□ 0.22
SUPT16H-202ENST00000552829 KTN1Q86UP2 1357 aaKnown RBP16.43■□□□□ 0.22
SUPT16H-202ENST00000552829 ANKRD24Q8TF21 1146 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms